RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 GAGE4Q13068 117 aa4.1□□□□□ -1.75
CHRNA6-202ENST00000529467 GAGE5Q13069 117 aa4.1□□□□□ -1.75
CHRNA6-202ENST00000529467 GAGE13Q4V321 117 aa4.1□□□□□ -1.75
CHRNA6-202ENST00000529467 SERTAD4-AS1Q5TG53 156 aa4.1□□□□□ -1.75
CHRNA6-202ENST00000529467 SFTA2Q6UW10 78 aa4.1□□□□□ -1.75
CHRNA6-202ENST00000529467 NTM-AS1Q6ZSK4 140 aa4.1□□□□□ -1.75
CHRNA6-202ENST00000529467 LINC01561Q8N1V8 128 aa4.1□□□□□ -1.75
CHRNA6-202ENST00000529467 OR5A1Q8NGJ0 315 aa4.1□□□□□ -1.75
CHRNA6-202ENST00000529467 DEFB104AQ8WTQ1 72 aa4.1□□□□□ -1.75
CHRNA6-202ENST00000529467 CDC42SE2Q9NRR3 84 aa4.1□□□□□ -1.75
CHRNA6-202ENST00000529467 IGLV4-69A0A075B6H9 119 aa4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 hDV102S1A0JD36 115 aa4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 H3BRM9 83 aa4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 NMUP48645 174 aa4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 HNRNPA3P51991 378 aaKnown RBP4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 KRTAP10-4P60372 401 aaPredicted RBP4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 RBX1P62877 108 aa4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 WFDC2Q14508 124 aa4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 TAL2Q16559 108 aa4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 LELP1Q5T871 98 aa4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 AMMECR1LQ6DCA0 310 aa4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 ATOH7Q8N100 152 aa4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 PLEKHB2Q96CS7 222 aa4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 Q9HAA7 133 aa4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 LRP1Q07954 4544 aaKnown RBP4.09□□□□□ -1.75
CHRNA6-202ENST00000529467 TRAV8-6A0A0B4J262 113 aa4.08□□□□□ -1.76
CHRNA6-202ENST00000529467 TMEM238C9JI98 176 aa4.08□□□□□ -1.76
CHRNA6-202ENST00000529467 IGHV3-30P01768 117 aa4.08□□□□□ -1.76
CHRNA6-202ENST00000529467 IGHV3-33P01772 117 aa4.08□□□□□ -1.76
CHRNA6-202ENST00000529467 IGHV3-30-3P0DP02 117 aa4.08□□□□□ -1.76
CHRNA6-202ENST00000529467 IGHV3-30-5P0DP03 117 aa4.08□□□□□ -1.76
CHRNA6-202ENST00000529467 UBE2D1P51668 147 aa4.08□□□□□ -1.76
CHRNA6-202ENST00000529467 FAM104AQ969W3 186 aa4.08□□□□□ -1.76
CHRNA6-202ENST00000529467 CHAC1Q9BUX1 264 aa4.08□□□□□ -1.76
CHRNA6-202ENST00000529467 PRO1933Q9H354 126 aa4.08□□□□□ -1.76
CHRNA6-202ENST00000529467 Q9UF83 564 aa4.08□□□□□ -1.76
CHRNA6-202ENST00000529467 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 TMEM223A0PJW6 202 aa4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 IGKV2-29A2NJV5 120 aaPredicted RBP4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 LEPROTO15243 131 aa4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 OXTP01178 125 aa4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 ZNF22P17026 224 aaPredicted RBP4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 TMEM170BQ5T4T1 132 aa4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 Q6ZVH6 145 aa4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 STPG4Q8N801 248 aa4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 CHCHD5Q9BSY4 110 aa4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 TM2D2Q9BX73 214 aa4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 PPDPFQ9H3Y8 114 aa4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 GEMIN7Q9H840 131 aaKnown RBP4.07□□□□□ -1.76
CHRNA6-202ENST00000529467 IGHV1-58A0A0C4DH39 117 aa4.06□□□□□ -1.76
CHRNA6-202ENST00000529467 MYMXA0A1B0GTQ4 84 aa4.06□□□□□ -1.76
CHRNA6-202ENST00000529467 HSD52Q0P140 79 aa4.06□□□□□ -1.76
CHRNA6-202ENST00000529467 LINC01620Q4KN68 170 aa4.06□□□□□ -1.76
CHRNA6-202ENST00000529467 Q6ZUT4 128 aa4.06□□□□□ -1.76
CHRNA6-202ENST00000529467 SCXQ7RTU7 201 aa4.06□□□□□ -1.76
CHRNA6-202ENST00000529467 HMCN2Q8NDA2 5059 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 TRAV8-3A0A0A6YYJ7 113 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 TRAV8-4A0A0B4J246 113 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 IGLV5-39A0A0G2JS06 123 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 A0A0J9YXV3 536 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 J3QQQ9 107 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 LECT2O14960 151 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 LGALS3P17931 250 aaKnown RBP4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 HERV-K104P63124 156 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 SS18Q15532 418 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 COL5A1-AS1Q5SY13 56 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 LINC00242Q5T6M2 205 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 COPS9Q8WXC6 57 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 SPANXB1Q9NS25 103 aaPredicted RBP4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 PLA2G2DQ9UNK4 145 aa4.05□□□□□ -1.76
CHRNA6-202ENST00000529467 UBR4Q5T4S7 5183 aa4.04□□□□□ -1.76
CHRNA6-202ENST00000529467 A0A087WZ39 114 aa4.04□□□□□ -1.76
CHRNA6-202ENST00000529467 IGKV2D-26A0A0A0MRZ7 120 aa4.04□□□□□ -1.76
CHRNA6-202ENST00000529467 A0A0J9YXY3 114 aa4.04□□□□□ -1.76
CHRNA6-202ENST00000529467 A6NDN8 102 aa4.04□□□□□ -1.76
CHRNA6-202ENST00000529467 TIMM17BO60830 172 aa4.04□□□□□ -1.76
CHRNA6-202ENST00000529467 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
CHRNA6-202ENST00000529467 C2orf91Q6ZV80 131 aa4.04□□□□□ -1.76
CHRNA6-202ENST00000529467 CIRBP-AS1Q8TBR5 109 aa4.04□□□□□ -1.76
CHRNA6-202ENST00000529467 OPRPNQ99935 248 aaPredicted RBP4.04□□□□□ -1.76
CHRNA6-202ENST00000529467 PRR34Q9NV39 138 aa4.04□□□□□ -1.76
CHRNA6-202ENST00000529467 TP73-AS1Q9UF72 201 aa4.04□□□□□ -1.76
CHRNA6-202ENST00000529467 PKHD1L1Q86WI1 4243 aa4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 IGHV3OR16-9A0A0B4J2B5 98 aa4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 LINC00959A0A1B0GUT2 108 aa4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 ZNF815PA8K554 130 aa4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 TMEM262E9PQX1 116 aa4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 CXCL5P42830 114 aa4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 PTTG1IPP53801 180 aa4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 GAGE6Q13070 117 aa4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 CIRBPQ14011 172 aaKnown RBP4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 CD164L2Q6UWJ8 174 aa4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 PCP2Q8IVA1 136 aa4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 SNHG12Q9BXW3 62 aa4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 COX11Q9Y6N1 276 aa4.03□□□□□ -1.76
CHRNA6-202ENST00000529467 IGLV4-60A0A075B6I1 120 aa4.02□□□□□ -1.77
CHRNA6-202ENST00000529467 TRAV13-1A0A0B4J241 112 aa4.02□□□□□ -1.77
CHRNA6-202ENST00000529467 SMIM1B2RUZ4 78 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 755.5 ms