RNA–Protein interactions for RNA: ENST00000529045.1

PTPN22-208, Transcript of protein tyrosine phosphatase, non-receptor type 22, human

TSL 4

Gene PTPN22, Length 527 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN22-208	ENST00000529045	TRBV12-3	P01733	135 aa		5.29	□□□□□ -1.56
PTPN22-208	ENST00000529045	RPL18A	Q02543	176 aa	Known RBP	5.29	□□□□□ -1.56
PTPN22-208	ENST00000529045	S100A7L2	Q5SY68	101 aa		5.29	□□□□□ -1.56
PTPN22-208	ENST00000529045	ATP5EP2	Q5VTU8	51 aa		5.29	□□□□□ -1.56
PTPN22-208	ENST00000529045	MPLKIP	Q8TAP9	179 aa		5.29	□□□□□ -1.56
PTPN22-208	ENST00000529045	SMCR5	Q8TEV8	140 aa		5.29	□□□□□ -1.56
PTPN22-208	ENST00000529045	OBSCN-AS1	Q96MR7	158 aa		5.29	□□□□□ -1.56
PTPN22-208	ENST00000529045	IGHV3-53	P01767	116 aa		5.28	□□□□□ -1.56
PTPN22-208	ENST00000529045	DEFB1	P60022	68 aa		5.28	□□□□□ -1.56
PTPN22-208	ENST00000529045	SERP2	Q8N6R1	65 aa		5.28	□□□□□ -1.56
PTPN22-208	ENST00000529045	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	5.28	□□□□□ -1.56
PTPN22-208	ENST00000529045	DUX5	Q96PT3	197 aa		5.28	□□□□□ -1.56
PTPN22-208	ENST00000529045	BIRC6	Q9NR09	4857 aa		5.28	□□□□□ -1.56
PTPN22-208	ENST00000529045		A0A096LNT2	108 aa		5.27	□□□□□ -1.57
PTPN22-208	ENST00000529045	BCE1	O60756	84 aa		5.27	□□□□□ -1.57
PTPN22-208	ENST00000529045	DNAL4	O96015	105 aa		5.27	□□□□□ -1.57
PTPN22-208	ENST00000529045	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.27	□□□□□ -1.57
PTPN22-208	ENST00000529045	ZNF625	Q96I27	306 aa	Predicted RBP	5.27	□□□□□ -1.57
PTPN22-208	ENST00000529045		Q9H8V8	135 aa		5.27	□□□□□ -1.57
PTPN22-208	ENST00000529045	CDKN2A-AS1	Q9UH64	79 aa		5.27	□□□□□ -1.57
PTPN22-208	ENST00000529045	WNK2	Q9Y3S1	2297 aa		5.27	□□□□□ -1.57
PTPN22-208	ENST00000529045	IGHV3OR16-10	A0A075B7F0	116 aa		5.26	□□□□□ -1.57
PTPN22-208	ENST00000529045	IGHV4-28	A0A0C4DH34	117 aa		5.26	□□□□□ -1.57
PTPN22-208	ENST00000529045	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.26	□□□□□ -1.57
PTPN22-208	ENST00000529045	C22orf24	Q9Y442	160 aa		5.26	□□□□□ -1.57
PTPN22-208	ENST00000529045	TRBV10-1	A0A0K0K1A3	114 aa		5.25	□□□□□ -1.57
PTPN22-208	ENST00000529045	SMIM1	B2RUZ4	78 aa		5.25	□□□□□ -1.57
PTPN22-208	ENST00000529045	RS1	O15537	224 aa		5.25	□□□□□ -1.57
PTPN22-208	ENST00000529045	NDUFC2	O95298	119 aa		5.25	□□□□□ -1.57
PTPN22-208	ENST00000529045	IGHV3-11	P01762	117 aa		5.25	□□□□□ -1.57
PTPN22-208	ENST00000529045	CRP	P02741	224 aa		5.25	□□□□□ -1.57
PTPN22-208	ENST00000529045	SPINK13	Q1W4C9	94 aa		5.25	□□□□□ -1.57
PTPN22-208	ENST00000529045	LINC00242	Q5T6M2	205 aa		5.25	□□□□□ -1.57
PTPN22-208	ENST00000529045	KLK5	Q9Y337	293 aa	Predicted RBP	5.25	□□□□□ -1.57
PTPN22-208	ENST00000529045	IGKV3-7	A0A075B6H7	116 aa		5.24	□□□□□ -1.57
PTPN22-208	ENST00000529045	TRAV12-2	A0A075B6T6	113 aa		5.24	□□□□□ -1.57
PTPN22-208	ENST00000529045	TRBV10-3	A0A0K0K1G6	114 aa		5.24	□□□□□ -1.57
PTPN22-208	ENST00000529045	IGHV4-31	P0DP07	118 aa		5.24	□□□□□ -1.57
PTPN22-208	ENST00000529045	PSMB8	P28062	276 aa		5.24	□□□□□ -1.57
PTPN22-208	ENST00000529045	NPC2	P61916	151 aa		5.24	□□□□□ -1.57
PTPN22-208	ENST00000529045	SOSTDC1	Q6X4U4	206 aa		5.24	□□□□□ -1.57
PTPN22-208	ENST00000529045	UPK3B	Q9BT76	320 aa		5.24	□□□□□ -1.57
PTPN22-208	ENST00000529045	KRTAP9-8	Q9BYQ0	159 aa		5.24	□□□□□ -1.57
PTPN22-208	ENST00000529045	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	5.23	□□□□□ -1.57
PTPN22-208	ENST00000529045	IGHV3OR16-12	A0A075B7B8	117 aa		5.23	□□□□□ -1.57
PTPN22-208	ENST00000529045	IGHV4-30-2	A0A087WSY4	118 aa		5.23	□□□□□ -1.57
PTPN22-208	ENST00000529045	IGKV2-29	A2NJV5	120 aa	Predicted RBP	5.23	□□□□□ -1.57
PTPN22-208	ENST00000529045	DEFB104A	Q8WTQ1	72 aa		5.23	□□□□□ -1.57
PTPN22-208	ENST00000529045	DPH3	Q96FX2	82 aa		5.23	□□□□□ -1.57
PTPN22-208	ENST00000529045	TRAV25	A0A0B4J276	109 aa		5.22	□□□□□ -1.57
PTPN22-208	ENST00000529045	hADV29S1	A0JD25	119 aa		5.22	□□□□□ -1.57
PTPN22-208	ENST00000529045		F5H768	121 aa		5.22	□□□□□ -1.57
PTPN22-208	ENST00000529045	JMJD7-PLA2G4B	H0Y9G9	81 aa		5.22	□□□□□ -1.57
PTPN22-208	ENST00000529045		H3BUX3	64 aa		5.22	□□□□□ -1.57
PTPN22-208	ENST00000529045	VPREB1	P12018	145 aa		5.22	□□□□□ -1.57
PTPN22-208	ENST00000529045		Q8N2B8	174 aa		5.22	□□□□□ -1.57
PTPN22-208	ENST00000529045	BPESC1	Q9GZL8	116 aa		5.22	□□□□□ -1.57
PTPN22-208	ENST00000529045	TENM3	Q9P273	2699 aa		5.22	□□□□□ -1.57
PTPN22-208	ENST00000529045	RBMY1B	A6NDE4	496 aa	Known RBP	5.21	□□□□□ -1.58
PTPN22-208	ENST00000529045	RBMY1E	A6NEQ0	496 aa	Known RBP	5.21	□□□□□ -1.58
PTPN22-208	ENST00000529045	RBMY1D	P0C7P1	496 aa	Known RBP	5.21	□□□□□ -1.58
PTPN22-208	ENST00000529045	RBMY1A1	P0DJD3	496 aa	Known RBP	5.21	□□□□□ -1.58
PTPN22-208	ENST00000529045	RBMY1C	P0DJD4	496 aa		5.21	□□□□□ -1.58
PTPN22-208	ENST00000529045	SEC61B	P60468	96 aa	Known RBP	5.21	□□□□□ -1.58
PTPN22-208	ENST00000529045	RNASE13	Q5GAN3	156 aa	Known RBP	5.21	□□□□□ -1.58
PTPN22-208	ENST00000529045	C11orf72	Q8NBR9	251 aa		5.21	□□□□□ -1.58
PTPN22-208	ENST00000529045	MRAP	Q8TCY5	172 aa		5.21	□□□□□ -1.58
PTPN22-208	ENST00000529045	FAM218A	Q96MZ4	157 aa		5.21	□□□□□ -1.58
PTPN22-208	ENST00000529045	CMYA5	Q8N3K9	4069 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	LOC107984640	A0A0U1RRK4	108 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	IBA57-AS1	B1ANH7	110 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	INS	P01308	110 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	IGKV3-20	P01619	116 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	CCK	P06307	115 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	SYNJ2BP	P57105	145 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	HILS1	P60008	231 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	RPL36A	P83881	106 aa	Known RBP	5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	COX6A2	Q02221	97 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	LYPD5	Q6UWN5	251 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	C10orf105	Q8TEF2	133 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	RPL36AL	Q969Q0	106 aa	Known RBP	5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	LINC00167	Q96N53	147 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	SND1-IT1	Q9HBX3	110 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	CDC42SE2	Q9NRR3	84 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	NACA	E9PAV3	2078 aa		5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	EPPK1	P58107	5090 aa	Known RBP	5.2	□□□□□ -1.58
PTPN22-208	ENST00000529045	TRAV13-1	A0A0B4J241	112 aa		5.19	□□□□□ -1.58
PTPN22-208	ENST00000529045		H3BQ85	93 aa		5.19	□□□□□ -1.58
PTPN22-208	ENST00000529045	BLCAP	P62952	87 aa		5.19	□□□□□ -1.58
PTPN22-208	ENST00000529045	RBMY1F	Q15415	496 aa	Known RBP	5.19	□□□□□ -1.58
PTPN22-208	ENST00000529045	COX7B2	Q8TF08	81 aa		5.19	□□□□□ -1.58
PTPN22-208	ENST00000529045	UBE2E2	Q96LR5	201 aa		5.19	□□□□□ -1.58
PTPN22-208	ENST00000529045	ORMDL1	Q9P0S3	153 aa		5.19	□□□□□ -1.58
PTPN22-208	ENST00000529045	IGHV3-73	A0A0B4J1V6	119 aa		5.18	□□□□□ -1.58
PTPN22-208	ENST00000529045	LY6E	Q16553	131 aa		5.18	□□□□□ -1.58
PTPN22-208	ENST00000529045	BRD3OS	Q6XYD6	125 aa		5.18	□□□□□ -1.58
PTPN22-208	ENST00000529045		Q75L30	129 aa		5.18	□□□□□ -1.58
PTPN22-208	ENST00000529045	LINC01561	Q8N1V8	128 aa		5.18	□□□□□ -1.58
PTPN22-208	ENST00000529045	PRR26	Q8N8Z3	221 aa		5.18	□□□□□ -1.58
PTPN22-208	ENST00000529045	SMIM11B	Q8TCY0	68 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms