RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 A0A096LNJ9 63 aa5.19□□□□□ -1.58
CTNND1-218ENST00000528232 RETNLBQ9BQ08 111 aa5.19□□□□□ -1.58
CTNND1-218ENST00000528232 XAGE1AQ9HD64 81 aa5.19□□□□□ -1.58
CTNND1-218ENST00000528232 IGLV1-51P01701 117 aa5.19□□□□□ -1.58
CTNND1-218ENST00000528232 TRAV10A0A0B4J240 114 aa5.18□□□□□ -1.58
CTNND1-218ENST00000528232 SMCPP49901 116 aaPredicted RBP5.18□□□□□ -1.58
CTNND1-218ENST00000528232 ACACBO00763 2458 aa5.18□□□□□ -1.58
CTNND1-218ENST00000528232 NAV3Q8IVL0 2385 aa5.18□□□□□ -1.58
CTNND1-218ENST00000528232 KTN1-AS1Q86SY8 53 aa5.18□□□□□ -1.58
CTNND1-218ENST00000528232 LINC00846Q9NV44 126 aa5.18□□□□□ -1.58
CTNND1-218ENST00000528232 Q8IZM0 81 aa5.18□□□□□ -1.58
CTNND1-218ENST00000528232 SPAG11AQ6PDA7 123 aa5.18□□□□□ -1.58
CTNND1-218ENST00000528232 LINC01547P58512 204 aaPredicted RBP5.18□□□□□ -1.58
CTNND1-218ENST00000528232 LCA10Q71F78 164 aa5.18□□□□□ -1.58
CTNND1-218ENST00000528232 HCG22E2RYF7 251 aa5.17□□□□□ -1.58
CTNND1-218ENST00000528232 Q6ZVQ6 151 aa5.17□□□□□ -1.58
CTNND1-218ENST00000528232 C7orf33Q8WU49 177 aa5.17□□□□□ -1.58
CTNND1-218ENST00000528232 AMELXQ99217 191 aa5.17□□□□□ -1.58
CTNND1-218ENST00000528232 LINC00242Q5T6M2 205 aa5.17□□□□□ -1.58
CTNND1-218ENST00000528232 CACNA1AO00555 2505 aa5.17□□□□□ -1.58
CTNND1-218ENST00000528232 CUL9Q8IWT3 2517 aa5.17□□□□□ -1.58
CTNND1-218ENST00000528232 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.17□□□□□ -1.58
CTNND1-218ENST00000528232 KPRPQ5T749 579 aaPredicted RBP5.16□□□□□ -1.58
CTNND1-218ENST00000528232 IGKV2-28A0A075B6P5 120 aa5.16□□□□□ -1.58
CTNND1-218ENST00000528232 IGKV2D-28P01615 120 aa5.16□□□□□ -1.58
CTNND1-218ENST00000528232 ATP11AUNQ6ZP68 121 aa5.16□□□□□ -1.58
CTNND1-218ENST00000528232 COL27A1Q8IZC6 1860 aaPredicted RBP5.16□□□□□ -1.58
CTNND1-218ENST00000528232 SONP18583 2426 aaKnown RBP5.16□□□□□ -1.58
CTNND1-218ENST00000528232 ZNF73O43830 326 aaPredicted RBP5.16□□□□□ -1.58
CTNND1-218ENST00000528232 POM121L12Q8N7R1 296 aa5.16□□□□□ -1.58
CTNND1-218ENST00000528232 PTPRBP23467 1997 aa5.16□□□□□ -1.58
CTNND1-218ENST00000528232 SMIM1B2RUZ4 78 aa5.15□□□□□ -1.58
CTNND1-218ENST00000528232 Q8N2B8 174 aa5.15□□□□□ -1.58
CTNND1-218ENST00000528232 CSPG4Q6UVK1 2322 aa5.15□□□□□ -1.58
CTNND1-218ENST00000528232 FAM19A4Q96LR4 140 aa5.15□□□□□ -1.58
CTNND1-218ENST00000528232 C7orf65Q6ZTY9 151 aa5.15□□□□□ -1.59
CTNND1-218ENST00000528232 HIVEP2P31629 2446 aa5.15□□□□□ -1.59
CTNND1-218ENST00000528232 TSPEAR-AS2P59090 65 aa5.15□□□□□ -1.59
CTNND1-218ENST00000528232 LINC01561Q8N1V8 128 aa5.14□□□□□ -1.59
CTNND1-218ENST00000528232 FHL2Q14192 279 aa5.14□□□□□ -1.59
CTNND1-218ENST00000528232 PRR15Q8IV56 129 aa5.14□□□□□ -1.59
CTNND1-218ENST00000528232 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.13□□□□□ -1.59
CTNND1-218ENST00000528232 COX6A2Q02221 97 aa5.13□□□□□ -1.59
CTNND1-218ENST00000528232 KIF25-AS1Q9Y6Z4 181 aa5.13□□□□□ -1.59
CTNND1-218ENST00000528232 NHLRC4P0CG21 123 aaPredicted RBP5.13□□□□□ -1.59
CTNND1-218ENST00000528232 C10orf25Q5T742 122 aa5.13□□□□□ -1.59
CTNND1-218ENST00000528232 PTPN13Q12923 2485 aa5.13□□□□□ -1.59
CTNND1-218ENST00000528232 H0Y9P7 68 aa5.13□□□□□ -1.59
CTNND1-218ENST00000528232 KLKP1Q107X0 134 aa5.12□□□□□ -1.59
CTNND1-218ENST00000528232 Q6ZSN1 163 aa5.12□□□□□ -1.59
CTNND1-218ENST00000528232 LINC00336Q6ZUF6 198 aa5.12□□□□□ -1.59
CTNND1-218ENST00000528232 SMR3AQ99954 134 aa5.12□□□□□ -1.59
CTNND1-218ENST00000528232 A0A087WYN8 130 aa5.12□□□□□ -1.59
CTNND1-218ENST00000528232 IGLV9-49A0A0B4J1Y8 123 aa5.12□□□□□ -1.59
CTNND1-218ENST00000528232 MYO18BQ8IUG5 2567 aa5.12□□□□□ -1.59
CTNND1-218ENST00000528232 RPL37AP8A6NKH3 93 aa5.11□□□□□ -1.59
CTNND1-218ENST00000528232 KLK9Q2XQG4 91 aa5.11□□□□□ -1.59
CTNND1-218ENST00000528232 X6R8D5 127 aa5.11□□□□□ -1.59
CTNND1-218ENST00000528232 ELOF1P60002 83 aaKnown RBP5.11□□□□□ -1.59
CTNND1-218ENST00000528232 WDR87Q6ZQQ6 2873 aa5.11□□□□□ -1.59
CTNND1-218ENST00000528232 TP53AIP1Q9HCN2 124 aa5.11□□□□□ -1.59
CTNND1-218ENST00000528232 LINC00474Q9P2X8 69 aa5.11□□□□□ -1.59
CTNND1-218ENST00000528232 IGLV4-60A0A075B6I1 120 aa5.11□□□□□ -1.59
CTNND1-218ENST00000528232 LOC110117498A0A087WWA1 95 aa5.11□□□□□ -1.59
CTNND1-218ENST00000528232 CYSRT1A8MQ03 144 aa5.1□□□□□ -1.59
CTNND1-218ENST00000528232 PRRC2AP48634 2157 aaKnown RBP5.1□□□□□ -1.59
CTNND1-218ENST00000528232 A0A1B0GUV1 79 aa5.1□□□□□ -1.59
CTNND1-218ENST00000528232 C1orf137Q5JT78 98 aa5.1□□□□□ -1.59
CTNND1-218ENST00000528232 ADAMTSL4-AS1Q5T5F5 129 aa5.1□□□□□ -1.59
CTNND1-218ENST00000528232 C11orf72Q8NBR9 251 aa5.1□□□□□ -1.59
CTNND1-218ENST00000528232 EGFEM1PQ0D2K5 195 aa5.09□□□□□ -1.59
CTNND1-218ENST00000528232 LINC00575Q6W349 94 aa5.09□□□□□ -1.59
CTNND1-218ENST00000528232 LINC00315P59091 139 aa5.08□□□□□ -1.6
CTNND1-218ENST00000528232 MUC4Q99102 2169 aa5.08□□□□□ -1.6
CTNND1-218ENST00000528232 A0A1B0GU69 56 aa5.08□□□□□ -1.6
CTNND1-218ENST00000528232 SPINK1P00995 79 aa5.08□□□□□ -1.6
CTNND1-218ENST00000528232 UNQ6190/PRO20217Q6UXQ8 127 aa5.08□□□□□ -1.6
CTNND1-218ENST00000528232 IGHV6-1A0A0B4J1U7 121 aa5.07□□□□□ -1.6
CTNND1-218ENST00000528232 PCOTHQ58A44 107 aa5.07□□□□□ -1.6
CTNND1-218ENST00000528232 C1orf64Q8NEQ6 169 aa5.07□□□□□ -1.6
CTNND1-218ENST00000528232 REG3GQ6UW15 175 aa5.06□□□□□ -1.6
CTNND1-218ENST00000528232 ACYP2P14621 99 aa5.06□□□□□ -1.6
CTNND1-218ENST00000528232 C9orf116Q5BN46 136 aaPredicted RBP5.06□□□□□ -1.6
CTNND1-218ENST00000528232 PIEZO2Q9H5I5 2752 aa5.06□□□□□ -1.6
CTNND1-218ENST00000528232 FHL3Q13643 280 aa5.06□□□□□ -1.6
CTNND1-218ENST00000528232 IGF2RP11717 2491 aa5.06□□□□□ -1.6
CTNND1-218ENST00000528232 IGLV5-39A0A0G2JS06 123 aa5.05□□□□□ -1.6
CTNND1-218ENST00000528232 C2CD3Q4AC94 2353 aa5.05□□□□□ -1.6
CTNND1-218ENST00000528232 CCDC168Q8NDH2 2452 aa5.05□□□□□ -1.6
CTNND1-218ENST00000528232 C2orf48Q96LS8 159 aa5.04□□□□□ -1.6
CTNND1-218ENST00000528232 LOC101927531A0A1B0GV80 90 aa5.04□□□□□ -1.6
CTNND1-218ENST00000528232 M0R2N4 97 aa5.04□□□□□ -1.6
CTNND1-218ENST00000528232 Q6ZTC4 211 aa5.04□□□□□ -1.6
CTNND1-218ENST00000528232 NCOR2Q9Y618 2525 aa5.04□□□□□ -1.6
CTNND1-218ENST00000528232 LYPD5Q6UWN5 251 aa5.04□□□□□ -1.6
CTNND1-218ENST00000528232 ABCA2Q9BZC7 2435 aa5.04□□□□□ -1.6
CTNND1-218ENST00000528232 PLA2G1BP04054 148 aaKnown RBP5.04□□□□□ -1.6
CTNND1-218ENST00000528232 FSHBP01225 129 aa5.03□□□□□ -1.6
CTNND1-218ENST00000528232 LINC01600Q96MT4 127 aa5.03□□□□□ -1.6
CTNND1-218ENST00000528232 NUPR2A6NF83 97 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms