RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 J3QQQ9 107 aa3.99□□□□□ -1.77
LINC01001-202ENST00000527683 UBE2V1Q13404 147 aa3.99□□□□□ -1.77
LINC01001-202ENST00000527683 SCGB1D4Q6XE38 83 aa3.99□□□□□ -1.77
LINC01001-202ENST00000527683 CDC42SE2Q9NRR3 84 aa3.99□□□□□ -1.77
LINC01001-202ENST00000527683 SPANXB1Q9NS25 103 aaPredicted RBP3.99□□□□□ -1.77
LINC01001-202ENST00000527683 IGHV1-58A0A0C4DH39 117 aa3.98□□□□□ -1.77
LINC01001-202ENST00000527683 Q6ZR54 194 aa3.98□□□□□ -1.77
LINC01001-202ENST00000527683 CEND1Q8N111 149 aa3.98□□□□□ -1.77
LINC01001-202ENST00000527683 MAPKAPK5-AS1Q8N8E1 139 aa3.98□□□□□ -1.77
LINC01001-202ENST00000527683 HIST1H4GQ99525 98 aa3.98□□□□□ -1.77
LINC01001-202ENST00000527683 CHCHD5Q9BSY4 110 aa3.98□□□□□ -1.77
LINC01001-202ENST00000527683 TM2D2Q9BX73 214 aa3.98□□□□□ -1.77
LINC01001-202ENST00000527683 TTTY13Q9BZ97 58 aa3.98□□□□□ -1.77
LINC01001-202ENST00000527683 CELA1Q9UNI1 258 aa3.98□□□□□ -1.77
LINC01001-202ENST00000527683 ICOSQ9Y6W8 199 aa3.98□□□□□ -1.77
LINC01001-202ENST00000527683 DEFB131BA0A096LNP1 70 aa3.97□□□□□ -1.77
LINC01001-202ENST00000527683 A0A1B0GUV1 79 aa3.97□□□□□ -1.77
LINC01001-202ENST00000527683 H3BNG1 76 aa3.97□□□□□ -1.77
LINC01001-202ENST00000527683 K7ERU9 68 aa3.97□□□□□ -1.77
LINC01001-202ENST00000527683 CCL25O15444 150 aa3.97□□□□□ -1.77
LINC01001-202ENST00000527683 IGHV3-30-3P0DP02 117 aa3.97□□□□□ -1.77
LINC01001-202ENST00000527683 TSPEAR-AS2P59090 65 aa3.97□□□□□ -1.77
LINC01001-202ENST00000527683 MRPL23Q16540 153 aaKnown RBP3.97□□□□□ -1.77
LINC01001-202ENST00000527683 RNASE13Q5GAN3 156 aaKnown RBP3.97□□□□□ -1.77
LINC01001-202ENST00000527683 LINC00242Q5T6M2 205 aa3.97□□□□□ -1.77
LINC01001-202ENST00000527683 VSIG2Q96IQ7 327 aa3.97□□□□□ -1.77
LINC01001-202ENST00000527683 RYR1P21817 5038 aa3.97□□□□□ -1.77
LINC01001-202ENST00000527683 DNAH11Q96DT5 4516 aa3.96□□□□□ -1.77
LINC01001-202ENST00000527683 FAT2Q9NYQ8 4349 aa3.96□□□□□ -1.78
LINC01001-202ENST00000527683 IGLV5-39A0A0G2JS06 123 aa3.96□□□□□ -1.78
LINC01001-202ENST00000527683 A0A0J9YY99 117 aa3.96□□□□□ -1.78
LINC01001-202ENST00000527683 KRTAP29-1A8MX34 341 aaPredicted RBP3.96□□□□□ -1.78
LINC01001-202ENST00000527683 F5H768 121 aa3.96□□□□□ -1.78
LINC01001-202ENST00000527683 TAX1BP3O14907 124 aa3.96□□□□□ -1.78
LINC01001-202ENST00000527683 GAGE6Q13070 117 aa3.96□□□□□ -1.78
LINC01001-202ENST00000527683 VAMP3Q15836 100 aa3.96□□□□□ -1.78
LINC01001-202ENST00000527683 Q6ZVH6 145 aa3.96□□□□□ -1.78
LINC01001-202ENST00000527683 CDKN2A-AS1Q9UH64 79 aa3.96□□□□□ -1.78
LINC01001-202ENST00000527683 DNAH2Q9P225 4427 aa3.96□□□□□ -1.78
LINC01001-202ENST00000527683 DYNC1H1Q14204 4646 aaKnown RBP3.96□□□□□ -1.78
LINC01001-202ENST00000527683 TRAV13-1A0A0B4J241 112 aa3.95□□□□□ -1.78
LINC01001-202ENST00000527683 SMIM1B2RUZ4 78 aa3.95□□□□□ -1.78
LINC01001-202ENST00000527683 NDUFA1O15239 70 aa3.95□□□□□ -1.78
LINC01001-202ENST00000527683 TIMM17BO60830 172 aa3.95□□□□□ -1.78
LINC01001-202ENST00000527683 SMIM13P0DJ93 91 aa3.95□□□□□ -1.78
LINC01001-202ENST00000527683 FXYD2P54710 66 aa3.95□□□□□ -1.78
LINC01001-202ENST00000527683 SRSF9Q13242 221 aaKnown RBP eCLIP3.95□□□□□ -1.78
LINC01001-202ENST00000527683 LELP1Q5T871 98 aa3.95□□□□□ -1.78
LINC01001-202ENST00000527683 SFTA2Q6UW10 78 aa3.95□□□□□ -1.78
LINC01001-202ENST00000527683 NDUFA12Q9UI09 145 aa3.95□□□□□ -1.78
LINC01001-202ENST00000527683 IGLV4-60A0A075B6I1 120 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 IGHV3-64A0A075B6Q5 118 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 TRAV8-3A0A0A6YYJ7 113 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 A0A0J9YXY3 114 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 A0A1B0GV72 72 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 A0A1B0GWB2 263 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 CDK2AP2O75956 126 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 IGKV2-30P06310 120 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 SPINK8P0C7L1 97 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 HTN3P15516 51 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 HERV-K104P63124 156 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 SS18Q15532 418 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 OCIAD2Q56VL3 154 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 C10orf25Q5T742 122 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 C1orf134Q5TEV5 83 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 LINC01561Q8N1V8 128 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 COPS9Q8WXC6 57 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 SPANXDQ9BXN6 97 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 NHP2Q9NX24 153 aaKnown RBP3.94□□□□□ -1.78
LINC01001-202ENST00000527683 SPANXCQ9NY87 97 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 HECTD4Q9Y4D8 3996 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 DNAH17Q9UFH2 4485 aa3.94□□□□□ -1.78
LINC01001-202ENST00000527683 A0A087WZ39 114 aa3.93□□□□□ -1.78
LINC01001-202ENST00000527683 A0A096LPF7 62 aa3.93□□□□□ -1.78
LINC01001-202ENST00000527683 LINC00959A0A1B0GUT2 108 aa3.93□□□□□ -1.78
LINC01001-202ENST00000527683 TMEM262E9PQX1 116 aa3.93□□□□□ -1.78
LINC01001-202ENST00000527683 IGHV3-30P01768 117 aa3.93□□□□□ -1.78
LINC01001-202ENST00000527683 IGHV3-30-5P0DP03 117 aa3.93□□□□□ -1.78
LINC01001-202ENST00000527683 SCGB1A1P11684 91 aa3.93□□□□□ -1.78
LINC01001-202ENST00000527683 RPL24P83731 157 aaKnown RBP3.93□□□□□ -1.78
LINC01001-202ENST00000527683 COX6A2Q02221 97 aa3.93□□□□□ -1.78
LINC01001-202ENST00000527683 CIRBPQ14011 172 aaKnown RBP3.93□□□□□ -1.78
LINC01001-202ENST00000527683 C10orf126Q8N4M7 172 aa3.93□□□□□ -1.78
LINC01001-202ENST00000527683 DNAH6Q9C0G6 4158 aa3.92□□□□□ -1.78
LINC01001-202ENST00000527683 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.92□□□□□ -1.78
LINC01001-202ENST00000527683 IGHV3OR16-9A0A0B4J2B5 98 aa3.92□□□□□ -1.78
LINC01001-202ENST00000527683 C16orf90A8MZG2 172 aa3.92□□□□□ -1.78
LINC01001-202ENST00000527683 IFITM1P13164 125 aa3.92□□□□□ -1.78
LINC01001-202ENST00000527683 MIAQ16674 131 aa3.92□□□□□ -1.78
LINC01001-202ENST00000527683 LYRM7Q5U5X0 104 aa3.92□□□□□ -1.78
LINC01001-202ENST00000527683 GTF2H5Q6ZYL4 71 aa3.92□□□□□ -1.78
LINC01001-202ENST00000527683 PPDPFQ9H3Y8 114 aa3.92□□□□□ -1.78
LINC01001-202ENST00000527683 HSPG2P98160 4391 aa3.91□□□□□ -1.78
LINC01001-202ENST00000527683 A0A0B4J2C4 111 aa3.91□□□□□ -1.78
LINC01001-202ENST00000527683 IGKV3OR2-268A0A0C4DH90 116 aa3.91□□□□□ -1.78
LINC01001-202ENST00000527683 A0A1W2PPM0 123 aa3.91□□□□□ -1.78
LINC01001-202ENST00000527683 H3BUT2 72 aa3.91□□□□□ -1.78
LINC01001-202ENST00000527683 ANGP03950 147 aaKnown RBP3.91□□□□□ -1.78
LINC01001-202ENST00000527683 FABP2P12104 132 aa3.91□□□□□ -1.78
LINC01001-202ENST00000527683 REG3AQ06141 175 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms