RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 UPK3BQ9BT76 320 aa12.7□□□□□ -0.38
SMPD1-203ENST00000527275 TOMM7Q9P0U1 55 aa12.7□□□□□ -0.38
SMPD1-203ENST00000527275 HERV-K104P63124 156 aa12.7□□□□□ -0.38
SMPD1-203ENST00000527275 GTF2H5Q6ZYL4 71 aa12.7□□□□□ -0.38
SMPD1-203ENST00000527275 UBE2DNLQ8IWF7 75 aa12.7□□□□□ -0.38
SMPD1-203ENST00000527275 PGPEP1Q9NXJ5 209 aa12.69□□□□□ -0.38
SMPD1-203ENST00000527275 K7EP34 96 aa12.69□□□□□ -0.38
SMPD1-203ENST00000527275 SPCS1Q9Y6A9 102 aa12.69□□□□□ -0.38
SMPD1-203ENST00000527275 C3orf84H3BNL1 204 aa12.68□□□□□ -0.38
SMPD1-203ENST00000527275 LINC01556Q5JQF7 62 aa12.68□□□□□ -0.38
SMPD1-203ENST00000527275 DNAH10OSP0CZ25 163 aa12.67□□□□□ -0.38
SMPD1-203ENST00000527275 NPC2P61916 151 aa12.67□□□□□ -0.38
SMPD1-203ENST00000527275 OCIAD2Q56VL3 154 aa12.67□□□□□ -0.38
SMPD1-203ENST00000527275 DAND5Q8N907 189 aa12.67□□□□□ -0.38
SMPD1-203ENST00000527275 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.67□□□□□ -0.38
SMPD1-203ENST00000527275 IFITM1P13164 125 aa12.67□□□□□ -0.38
SMPD1-203ENST00000527275 MEIG1Q5JSS6 88 aa12.67□□□□□ -0.38
SMPD1-203ENST00000527275 CD164L2Q6UWJ8 174 aa12.67□□□□□ -0.38
SMPD1-203ENST00000527275 CHCHD10Q8WYQ3 142 aaPredicted RBP12.67□□□□□ -0.38
SMPD1-203ENST00000527275 PRO1854Q9UHT4 67 aa12.67□□□□□ -0.38
SMPD1-203ENST00000527275 KLK12Q9UKR0 248 aa12.67□□□□□ -0.38
SMPD1-203ENST00000527275 A0A0U1RRA0 63 aa12.66□□□□□ -0.38
SMPD1-203ENST00000527275 IGLV10-54A0A075B6I4 117 aa12.66□□□□□ -0.38
SMPD1-203ENST00000527275 LINC01561Q8N1V8 128 aa12.66□□□□□ -0.38
SMPD1-203ENST00000527275 DNAH1Q9P2D7 4330 aa12.65□□□□□ -0.38
SMPD1-203ENST00000527275 TSPAN13O95857 204 aa12.65□□□□□ -0.38
SMPD1-203ENST00000527275 RNF151Q2KHN1 245 aa12.65□□□□□ -0.38
SMPD1-203ENST00000527275 A0A0B4J2C4 111 aa12.64□□□□□ -0.39
SMPD1-203ENST00000527275 EIF4EBP3O60516 100 aaPredicted RBP12.64□□□□□ -0.39
SMPD1-203ENST00000527275 COX7A2LO14548 114 aa12.63□□□□□ -0.39
SMPD1-203ENST00000527275 C6orf226Q5I0X4 101 aa12.63□□□□□ -0.39
SMPD1-203ENST00000527275 PRR34Q9NV39 138 aa12.63□□□□□ -0.39
SMPD1-203ENST00000527275 LINC00308Q8TCZ7 52 aa12.62□□□□□ -0.39
SMPD1-203ENST00000527275 ENHOQ6UWT2 76 aa12.61□□□□□ -0.39
SMPD1-203ENST00000527275 UBE2WQ96B02 151 aa12.61□□□□□ -0.39
SMPD1-203ENST00000527275 Q8IZM0 81 aa12.6□□□□□ -0.39
SMPD1-203ENST00000527275 VPS13DQ5THJ4 4388 aa12.6□□□□□ -0.39
SMPD1-203ENST00000527275 FOXI1Q12951 378 aa12.6□□□□□ -0.39
SMPD1-203ENST00000527275 SFTA2Q6UW10 78 aa12.6□□□□□ -0.39
SMPD1-203ENST00000527275 COPS9Q8WXC6 57 aa12.6□□□□□ -0.39
SMPD1-203ENST00000527275 ERG28Q9UKR5 140 aa12.6□□□□□ -0.39
SMPD1-203ENST00000527275 MALP21145 153 aa12.59□□□□□ -0.39
SMPD1-203ENST00000527275 PCP4P48539 62 aa12.59□□□□□ -0.39
SMPD1-203ENST00000527275 CRPP02741 224 aa12.59□□□□□ -0.39
SMPD1-203ENST00000527275 LOC107984156A0A0G2JMH3 177 aa12.58□□□□□ -0.4
SMPD1-203ENST00000527275 GAGE12HA6NDE8 117 aa12.58□□□□□ -0.4
SMPD1-203ENST00000527275 ARL17AQ8IVW1 177 aa12.58□□□□□ -0.4
SMPD1-203ENST00000527275 SOSTDC1Q6X4U4 206 aa12.57□□□□□ -0.4
SMPD1-203ENST00000527275 KRTAP1-5Q9BYS1 174 aa12.57□□□□□ -0.4
SMPD1-203ENST00000527275 H7C2G1 150 aa12.57□□□□□ -0.4
SMPD1-203ENST00000527275 K7ERU9 68 aa12.57□□□□□ -0.4
SMPD1-203ENST00000527275 IBA57-AS1B1ANH7 110 aa12.56□□□□□ -0.4
SMPD1-203ENST00000527275 LINC00158P58513 81 aa12.56□□□□□ -0.4
SMPD1-203ENST00000527275 C21orf62-AS1Q17RA5 79 aa12.56□□□□□ -0.4
SMPD1-203ENST00000527275 LY6G6CO95867 125 aa12.56□□□□□ -0.4
SMPD1-203ENST00000527275 VPS25Q9BRG1 176 aa12.56□□□□□ -0.4
SMPD1-203ENST00000527275 KIAA0087Q14695 138 aa12.55□□□□□ -0.4
SMPD1-203ENST00000527275 MIR7-3HGQ8N6C7 128 aa12.55□□□□□ -0.4
SMPD1-203ENST00000527275 KMT2AQ03164 3969 aa12.55□□□□□ -0.4
SMPD1-203ENST00000527275 TRAV8-4A0A0B4J246 113 aa12.54□□□□□ -0.4
SMPD1-203ENST00000527275 CKS1BP61024 79 aa12.54□□□□□ -0.4
SMPD1-203ENST00000527275 CFAP161Q6P656 301 aa12.54□□□□□ -0.4
SMPD1-203ENST00000527275 C2orf82Q6UX34 121 aa12.54□□□□□ -0.4
SMPD1-203ENST00000527275 Q9HAA7 133 aa12.54□□□□□ -0.4
SMPD1-203ENST00000527275 H3BMG7 143 aa12.54□□□□□ -0.4
SMPD1-203ENST00000527275 Q1RN00 199 aa12.54□□□□□ -0.4
SMPD1-203ENST00000527275 LINC00476Q8WZB0 136 aa12.54□□□□□ -0.4
SMPD1-203ENST00000527275 PPDPFQ9H3Y8 114 aa12.54□□□□□ -0.4
SMPD1-203ENST00000527275 PFN2P35080 140 aa12.53□□□□□ -0.4
SMPD1-203ENST00000527275 PSMB2P49721 201 aa12.53□□□□□ -0.4
SMPD1-203ENST00000527275 LYRM7Q5U5X0 104 aa12.53□□□□□ -0.4
SMPD1-203ENST00000527275 SCGB1C2P0DMR2 95 aa12.53□□□□□ -0.4
SMPD1-203ENST00000527275 NBDYA0A0U1RRE5 68 aa12.52□□□□□ -0.41
SMPD1-203ENST00000527275 CXCL5P42830 114 aa12.52□□□□□ -0.41
SMPD1-203ENST00000527275 IGKV2D-24A0A075B6R9 120 aa12.49□□□□□ -0.41
SMPD1-203ENST00000527275 M0R2N4 97 aa12.49□□□□□ -0.41
SMPD1-203ENST00000527275 C1orf43Q9BWL3 253 aa12.49□□□□□ -0.41
SMPD1-203ENST00000527275 RPL13AP40429 203 aaKnown RBP12.49□□□□□ -0.41
SMPD1-203ENST00000527275 TTC32Q5I0X7 151 aa12.49□□□□□ -0.41
SMPD1-203ENST00000527275 TRBV20-1A0A075B6N2 111 aa12.48□□□□□ -0.41
SMPD1-203ENST00000527275 TRBV30A0A0K0K1B3 111 aa12.48□□□□□ -0.41
SMPD1-203ENST00000527275 TCL1BO95988 128 aa12.47□□□□□ -0.41
SMPD1-203ENST00000527275 SPAG11BQ08648 103 aa12.47□□□□□ -0.41
SMPD1-203ENST00000527275 KRTAP26-1Q6PEX3 210 aa12.47□□□□□ -0.41
SMPD1-203ENST00000527275 F8W1H4 67 aa12.47□□□□□ -0.41
SMPD1-203ENST00000527275 SND1-IT1Q9HBX3 110 aa12.47□□□□□ -0.41
SMPD1-203ENST00000527275 TRIAP1O43715 76 aa12.46□□□□□ -0.42
SMPD1-203ENST00000527275 C6orf223Q8N319 242 aa12.46□□□□□ -0.42
SMPD1-203ENST00000527275 COX17Q14061 63 aa12.45□□□□□ -0.42
SMPD1-203ENST00000527275 DNAH10Q8IVF4 4471 aa12.44□□□□□ -0.42
SMPD1-203ENST00000527275 LINC00526Q96FQ7 95 aa12.44□□□□□ -0.42
SMPD1-203ENST00000527275 WFDC2Q14508 124 aa12.43□□□□□ -0.42
SMPD1-203ENST00000527275 Q6ZR54 194 aa12.43□□□□□ -0.42
SMPD1-203ENST00000527275 ALMS1Q8TCU4 4167 aa12.43□□□□□ -0.42
SMPD1-203ENST00000527275 UNQ6190/PRO20217Q6UXQ8 127 aa12.43□□□□□ -0.42
SMPD1-203ENST00000527275 MTURNQ8N3F0 131 aa12.43□□□□□ -0.42
SMPD1-203ENST00000527275 RMI2Q96E14 147 aa12.43□□□□□ -0.42
SMPD1-203ENST00000527275 PRO0461Q9UI25 63 aa12.43□□□□□ -0.42
SMPD1-203ENST00000527275 COX6CP09669 75 aa12.42□□□□□ -0.42
SMPD1-203ENST00000527275 C9orf116Q5BN46 136 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 278 ms