RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 HIST1H2BDP58876 126 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 HIST1H2BCP62807 126 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 PMCHL1Q16048 86 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 HIST2H2BEQ16778 126 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 COX19Q49B96 90 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.89□□□□□ -2.11
CSDE1-208ENST00000524652 PP632Q6XCG6 107 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 Q6ZUT4 128 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 MRPL52Q86TS9 123 aaKnown RBP1.89□□□□□ -2.11
CSDE1-208ENST00000524652 LINC00269Q8N2A0 174 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 Q8N8P6 123 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 HIST1H2BHQ93079 126 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 HIST1H2BNQ99877 126 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 HIST1H2BMQ99879 126 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 TMEM243Q9BU79 118 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 MAP1LC3AQ9H492 121 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 CDC42SE2Q9NRR3 84 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 KLK12Q9UKR0 248 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 LAMTOR2Q9Y2Q5 125 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 FLG2Q5D862 2391 aaPredicted RBP1.88□□□□□ -2.11
CSDE1-208ENST00000524652 SYNE2Q8WXH0 6885 aaKnown RBP1.88□□□□□ -2.11
CSDE1-208ENST00000524652 IGLV10-54A0A075B6I4 117 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 TRAV8-6A0A0B4J262 113 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 IGKV3OR2-268A0A0C4DH90 116 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 LRCOL1A6NCL2 159 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 IGIPA6NJ69 53 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 TMEM262E9PQX1 116 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 SERF1AO75920 110 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 PPP1R17O96001 155 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 ANGP03950 147 aaKnown RBP1.88□□□□□ -2.11
CSDE1-208ENST00000524652 FCER1GP30273 86 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 Q0VG73 95 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 LAGE3Q14657 143 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 TMEM97Q5BJF2 176 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 RNASEKQ6P5S7 137 aaKnown RBP1.88□□□□□ -2.11
CSDE1-208ENST00000524652 C2orf66Q6UXQ4 117 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 Q6ZVQ6 151 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 C6orf223Q8N319 242 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 FAM19A2Q8N3H0 131 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.88□□□□□ -2.11
CSDE1-208ENST00000524652 UBE2WQ96B02 151 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 TOMM6Q96B49 74 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 KIR2DL4Q99706 377 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 Q9HAA7 133 aa1.88□□□□□ -2.11
CSDE1-208ENST00000524652 NXT2Q9NPJ8 142 aaKnown RBP1.88□□□□□ -2.11
CSDE1-208ENST00000524652 TNXBP22105 4242 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 A0A087WX48 190 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 LINC00959A0A1B0GUT2 108 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 UBE2L6O14933 153 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 LECT2O14960 151 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 LINC00614P0C842 121 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 ZNF25P17030 456 aaPredicted RBP1.87□□□□□ -2.11
CSDE1-208ENST00000524652 MRPS36P82909 103 aaKnown RBP1.87□□□□□ -2.11
CSDE1-208ENST00000524652 COX6A2Q02221 97 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 REG3AQ06141 175 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 ORMDL2Q53FV1 153 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 PDZD11Q5EBL8 140 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 C1orf134Q5TEV5 83 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 SPATA12Q7Z6I5 190 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 ZNF664Q8N3J9 261 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 OR5A1Q8NGJ0 315 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 BAALCQ8WXS3 180 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 AMELXQ99217 191 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 TIMM21Q9BVV7 248 aa1.87□□□□□ -2.11
CSDE1-208ENST00000524652 CSDC2Q9Y534 153 aaKnown RBP1.87□□□□□ -2.11
CSDE1-208ENST00000524652 IGLV4-69A0A075B6H9 119 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 IGKV2D-24A0A075B6R9 120 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 A0A087WTM6 91 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 K7EMI3 77 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 K7EP13 123 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 CCL25O15444 150 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 HBDP02042 147 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 CRPP02741 224 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 UBE2D1P51668 147 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 RAB5BP61020 215 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 MIAQ16674 131 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 TTC32Q5I0X7 151 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 COA6Q5JTJ3 125 aaKnown RBP1.86□□□□□ -2.11
CSDE1-208ENST00000524652 AMMECR1LQ6DCA0 310 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 FA2HQ7L5A8 372 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 ERASQ7Z444 233 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 FAM19A3Q7Z5A8 133 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 C10orf126Q8N4M7 172 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 C15orf56Q8N910 161 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 CHCHD10Q8WYQ3 142 aaPredicted RBP1.86□□□□□ -2.11
CSDE1-208ENST00000524652 CHCHD1Q96BP2 118 aaKnown RBP1.86□□□□□ -2.11
CSDE1-208ENST00000524652 TIMM17AQ99595 171 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 SPANXA1Q9NS26 97 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 CYSLTR1Q9Y271 337 aa1.86□□□□□ -2.11
CSDE1-208ENST00000524652 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.85□□□□□ -2.11
CSDE1-208ENST00000524652 TRAV9-2A0A087WT02 112 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 TRAV8-3A0A0A6YYJ7 113 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 TRAV13-1A0A0B4J241 112 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 TRAV8-4A0A0B4J246 113 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 IGHV3OR16-9A0A0B4J2B5 98 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 A0A0J9YXV3 536 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 C1orf196B1AJZ1 125 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 HSBP1O75506 76 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 FABP4P15090 132 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 XCL1P47992 114 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms