RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 RPL24P83731 157 aaKnown RBP4.85□□□□□ -1.63
VPS11-201ENST00000524454 SRSF9Q13242 221 aaKnown RBP eCLIP4.85□□□□□ -1.63
VPS11-201ENST00000524454 CIRBPQ14011 172 aaKnown RBP4.85□□□□□ -1.63
VPS11-201ENST00000524454 EPPK1P58107 5090 aaKnown RBP4.84□□□□□ -1.63
VPS11-201ENST00000524454 KMT2AQ03164 3969 aa4.84□□□□□ -1.63
VPS11-201ENST00000524454 A0A096LPF7 62 aa4.84□□□□□ -1.63
VPS11-201ENST00000524454 TRAV13-1A0A0B4J241 112 aa4.84□□□□□ -1.63
VPS11-201ENST00000524454 TCTAP57738 103 aa4.84□□□□□ -1.63
VPS11-201ENST00000524454 GAGE6Q13070 117 aa4.84□□□□□ -1.63
VPS11-201ENST00000524454 SS18Q15532 418 aa4.84□□□□□ -1.63
VPS11-201ENST00000524454 MIAQ16674 131 aa4.84□□□□□ -1.63
VPS11-201ENST00000524454 RNASE13Q5GAN3 156 aaKnown RBP4.84□□□□□ -1.63
VPS11-201ENST00000524454 LYRM7Q5U5X0 104 aa4.84□□□□□ -1.63
VPS11-201ENST00000524454 C10orf126Q8N4M7 172 aa4.84□□□□□ -1.63
VPS11-201ENST00000524454 ZNF625Q96I27 306 aaPredicted RBP4.84□□□□□ -1.63
VPS11-201ENST00000524454 IGLV4-60A0A075B6I1 120 aa4.83□□□□□ -1.64
VPS11-201ENST00000524454 A0A0B4J2C4 111 aa4.83□□□□□ -1.64
VPS11-201ENST00000524454 LINC00959A0A1B0GUT2 108 aa4.83□□□□□ -1.64
VPS11-201ENST00000524454 SPINK8P0C7L1 97 aa4.83□□□□□ -1.64
VPS11-201ENST00000524454 CXCL5P42830 114 aa4.83□□□□□ -1.64
VPS11-201ENST00000524454 UBE2V1Q13404 147 aa4.83□□□□□ -1.64
VPS11-201ENST00000524454 C21orf62-AS1Q17RA5 79 aa4.83□□□□□ -1.64
VPS11-201ENST00000524454 CD164L2Q6UWJ8 174 aa4.83□□□□□ -1.64
VPS11-201ENST00000524454 GTF2H5Q6ZYL4 71 aa4.83□□□□□ -1.64
VPS11-201ENST00000524454 C15orf53Q8NAA6 179 aa4.83□□□□□ -1.64
VPS11-201ENST00000524454 LITAFQ99732 161 aa4.83□□□□□ -1.64
VPS11-201ENST00000524454 PRR34Q9NV39 138 aa4.83□□□□□ -1.64
VPS11-201ENST00000524454 NHP2Q9NX24 153 aaKnown RBP4.83□□□□□ -1.64
VPS11-201ENST00000524454 TRAV8-3A0A0A6YYJ7 113 aa4.82□□□□□ -1.64
VPS11-201ENST00000524454 TRAV8-4A0A0B4J246 113 aa4.82□□□□□ -1.64
VPS11-201ENST00000524454 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
VPS11-201ENST00000524454 A0A1W2PPM0 123 aa4.82□□□□□ -1.64
VPS11-201ENST00000524454 FABP2P12104 132 aa4.82□□□□□ -1.64
VPS11-201ENST00000524454 COX6A2Q02221 97 aa4.82□□□□□ -1.64
VPS11-201ENST00000524454 Q8IZM0 81 aa4.82□□□□□ -1.64
VPS11-201ENST00000524454 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
VPS11-201ENST00000524454 IBA57-AS1B1ANH7 110 aa4.81□□□□□ -1.64
VPS11-201ENST00000524454 K7EP13 123 aa4.81□□□□□ -1.64
VPS11-201ENST00000524454 VAMP3Q15836 100 aa4.81□□□□□ -1.64
VPS11-201ENST00000524454 LYPD5Q6UWN5 251 aa4.81□□□□□ -1.64
VPS11-201ENST00000524454 COX7B2Q8TF08 81 aa4.81□□□□□ -1.64
VPS11-201ENST00000524454 VPS13DQ5THJ4 4388 aa4.81□□□□□ -1.64
VPS11-201ENST00000524454 DNAH6Q9C0G6 4158 aa4.8□□□□□ -1.64
VPS11-201ENST00000524454 TMEM262E9PQX1 116 aa4.8□□□□□ -1.64
VPS11-201ENST00000524454 K7EP34 96 aa4.8□□□□□ -1.64
VPS11-201ENST00000524454 M0R2N4 97 aa4.8□□□□□ -1.64
VPS11-201ENST00000524454 REG3AQ06141 175 aa4.8□□□□□ -1.64
VPS11-201ENST00000524454 COX17Q14061 63 aa4.8□□□□□ -1.64
VPS11-201ENST00000524454 UBE2DNLQ8IWF7 75 aa4.8□□□□□ -1.64
VPS11-201ENST00000524454 Q9H8V8 135 aa4.8□□□□□ -1.64
VPS11-201ENST00000524454 TRBV20-1A0A075B6N2 111 aa4.79□□□□□ -1.64
VPS11-201ENST00000524454 IGHV3-64A0A075B6Q5 118 aa4.79□□□□□ -1.64
VPS11-201ENST00000524454 GAGE10A6NGK3 116 aa4.79□□□□□ -1.64
VPS11-201ENST00000524454 F8WDY8 70 aa4.79□□□□□ -1.64
VPS11-201ENST00000524454 H3BUT2 72 aa4.79□□□□□ -1.64
VPS11-201ENST00000524454 COX7A2LO14548 114 aa4.79□□□□□ -1.64
VPS11-201ENST00000524454 APOMO95445 188 aa4.79□□□□□ -1.64
VPS11-201ENST00000524454 ANGP03950 147 aaKnown RBP4.79□□□□□ -1.64
VPS11-201ENST00000524454 LINC01556Q5JQF7 62 aa4.79□□□□□ -1.64
VPS11-201ENST00000524454 LINC00269Q8N2A0 174 aa4.79□□□□□ -1.64
VPS11-201ENST00000524454 PRO1854Q9UHT4 67 aa4.79□□□□□ -1.64
VPS11-201ENST00000524454 BIRC6Q9NR09 4857 aa4.79□□□□□ -1.64
VPS11-201ENST00000524454 FRAS1Q86XX4 4008 aa4.78□□□□□ -1.64
VPS11-201ENST00000524454 LOC107984156A0A0G2JMH3 177 aa4.78□□□□□ -1.64
VPS11-201ENST00000524454 A4D1N5 150 aa4.78□□□□□ -1.64
VPS11-201ENST00000524454 PRSS2P07478 247 aa4.78□□□□□ -1.64
VPS11-201ENST00000524454 CFC1BP0CG36 223 aa4.78□□□□□ -1.64
VPS11-201ENST00000524454 CFC1P0CG37 223 aa4.78□□□□□ -1.64
VPS11-201ENST00000524454 MUSTN1Q8IVN3 82 aa4.78□□□□□ -1.64
VPS11-201ENST00000524454 ARL17AQ8IVW1 177 aa4.78□□□□□ -1.64
VPS11-201ENST00000524454 CHCHD10Q8WYQ3 142 aaPredicted RBP4.78□□□□□ -1.64
VPS11-201ENST00000524454 K7ERJ3 54 aa4.77□□□□□ -1.65
VPS11-201ENST00000524454 CRPP02741 224 aa4.77□□□□□ -1.65
VPS11-201ENST00000524454 DNAH10OSP0CZ25 163 aa4.77□□□□□ -1.65
VPS11-201ENST00000524454 FOXI1Q12951 378 aa4.77□□□□□ -1.65
VPS11-201ENST00000524454 MEIG1Q5JSS6 88 aa4.77□□□□□ -1.65
VPS11-201ENST00000524454 ADAMTSL4-AS1Q5T5F5 129 aa4.77□□□□□ -1.65
VPS11-201ENST00000524454 LINC00308Q8TCZ7 52 aa4.77□□□□□ -1.65
VPS11-201ENST00000524454 RAB37Q96AX2 223 aa4.77□□□□□ -1.65
VPS11-201ENST00000524454 UPK3BQ9BT76 320 aa4.77□□□□□ -1.65
VPS11-201ENST00000524454 SPCS1Q9Y6A9 102 aa4.77□□□□□ -1.65
VPS11-201ENST00000524454 DNAH10Q8IVF4 4471 aa4.77□□□□□ -1.65
VPS11-201ENST00000524454 GVQW2A0A096LPI5 108 aaPredicted RBP4.76□□□□□ -1.65
VPS11-201ENST00000524454 TRBV30A0A0K0K1B3 111 aa4.76□□□□□ -1.65
VPS11-201ENST00000524454 TSPAN13O95857 204 aa4.76□□□□□ -1.65
VPS11-201ENST00000524454 IGHV3-33P01772 117 aa4.76□□□□□ -1.65
VPS11-201ENST00000524454 XCL1P47992 114 aa4.76□□□□□ -1.65
VPS11-201ENST00000524454 C6orf226Q5I0X4 101 aa4.76□□□□□ -1.65
VPS11-201ENST00000524454 F8W1H4 67 aa4.75□□□□□ -1.65
VPS11-201ENST00000524454 M0QXV9 152 aa4.75□□□□□ -1.65
VPS11-201ENST00000524454 MALP21145 153 aa4.75□□□□□ -1.65
VPS11-201ENST00000524454 KIAA0087Q14695 138 aa4.75□□□□□ -1.65
VPS11-201ENST00000524454 CFAP161Q6P656 301 aa4.75□□□□□ -1.65
VPS11-201ENST00000524454 ENHOQ6UWT2 76 aa4.75□□□□□ -1.65
VPS11-201ENST00000524454 ERG28Q9UKR5 140 aa4.75□□□□□ -1.65
VPS11-201ENST00000524454 LINC00588Q9Y4M8 146 aa4.75□□□□□ -1.65
VPS11-201ENST00000524454 TRAV13-2A0A0B4J235 113 aa4.74□□□□□ -1.65
VPS11-201ENST00000524454 IGKV3OR2-268A0A0C4DH90 116 aa4.74□□□□□ -1.65
VPS11-201ENST00000524454 NDUFC2O95298 119 aa4.74□□□□□ -1.65
VPS11-201ENST00000524454 COX6CP09669 75 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms