RNA–Protein interactions for RNA: ENST00000524291.1

VDAC3-212, Transcript of voltage dependent anion channel 3, humanhuman

TSL 2

Gene VDAC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-212ENST00000524291 CEP295Q9C0D2 2601 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 ITPR3Q14573 2671 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 GCN1Q92616 2671 aaKnown RBP0.03□□□□□ -2.4
VDAC3-212ENST00000524291 URB1O60287 2271 aaKnown RBP0.03□□□□□ -2.4
VDAC3-212ENST00000524291 PKDREJQ9NTG1 2253 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 SRRM2Q9UQ35 2752 aaKnown RBP0.03□□□□□ -2.41
VDAC3-212ENST00000524291 ADGRL2O95490 1459 aa0.03□□□□□ -2.41
VDAC3-212ENST00000524291 PKD1L2Q7Z442 2459 aa0.03□□□□□ -2.41
VDAC3-212ENST00000524291 PCLOQ9Y6V0 5065 aa0.03□□□□□ -2.41
VDAC3-212ENST00000524291 DIP2CQ9Y2E4 1556 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 VWFP04275 2813 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 AKAP13Q12802 2813 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 DOPEY2Q9Y3R5 2298 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 MUC2Q02817 5179 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 LRRK2Q5S007 2527 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 C12orf57Q99622 126 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 CGREF1Q99674 301 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 CFAP46Q8IYW2 2715 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 PIEZO2Q9H5I5 2752 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 ABCC5O15440 1437 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 PRRC2CQ9Y520 2896 aaKnown RBP0.02□□□□□ -2.41
VDAC3-212ENST00000524291 RYR3Q15413 4870 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 COL4A6Q14031 1691 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 TOPAZ1Q8N9V7 1692 aa0.02□□□□□ -2.41
VDAC3-212ENST00000524291 PDZD2O15018 2839 aa0.01□□□□□ -2.41
VDAC3-212ENST00000524291 TNRC18O15417 2968 aaPredicted RBP0.01□□□□□ -2.41
VDAC3-212ENST00000524291 GOLGA4Q13439 2230 aaKnown RBP0.01□□□□□ -2.41
VDAC3-212ENST00000524291 RYR2Q92736 4967 aa0.01□□□□□ -2.41
VDAC3-212ENST00000524291 TLN1Q9Y490 2541 aaKnown RBP0.01□□□□□ -2.41
VDAC3-212ENST00000524291 A0A1B0GWA3 101 aa0.01□□□□□ -2.41
VDAC3-212ENST00000524291 ATP6V1G2-DDX39BF2Z307 99 aa0.01□□□□□ -2.41
VDAC3-212ENST00000524291 KRTDAPP60985 99 aa0.01□□□□□ -2.41
VDAC3-212ENST00000524291 SEC11AP67812 179 aa0.01□□□□□ -2.41
VDAC3-212ENST00000524291 FDCSPQ8NFU4 85 aa0.01□□□□□ -2.41
VDAC3-212ENST00000524291 LCN9Q8WX39 176 aa0.01□□□□□ -2.41
VDAC3-212ENST00000524291 TEX15Q9BXT5 2789 aa0.01□□□□□ -2.41
VDAC3-212ENST00000524291 POLA1P09884 1462 aaPredicted RBP0.01□□□□□ -2.41
VDAC3-212ENST00000524291 DCHS2Q6V1P9 2916 aa0□□□□□ -2.41
VDAC3-212ENST00000524291 LAMA2P24043 3122 aaKnown RBP0□□□□□ -2.41
VDAC3-212ENST00000524291 DMXL2Q8TDJ6 3036 aa0□□□□□ -2.41
VDAC3-212ENST00000524291 LINC01600Q96MT4 127 aa0□□□□□ -2.41
VDAC3-212ENST00000524291 MAGI1Q96QZ7 1491 aaPredicted RBP0□□□□□ -2.41
VDAC3-212ENST00000524291 MXRA5Q9NR99 2828 aa-0□□□□□ -2.41
VDAC3-212ENST00000524291 GVINP1Q7Z2Y8 2422 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.01□□□□□ -2.412e-16■■■■■ 32.9
VDAC3-212ENST00000524291 NUP188Q5SRE5 1749 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 EPPK1P58107 5090 aaKnown RBP-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 COL12A1Q99715 3063 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 ZZEF1O43149 2961 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 C1orf167Q5SNV9 1468 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 MRC2Q9UBG0 1479 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 NBEAQ8NFP9 2946 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 RNF213Q63HN8 5207 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 LINC00959A0A1B0GUT2 108 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 TMEM218A2RU14 115 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 SAA2P0DJI9 122 aaPredicted RBP-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 TCEAL7Q9BRU2 100 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 CNOT1A5YKK6 2376 aaKnown RBP-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 UBR4Q5T4S7 5183 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 RYR1P21817 5038 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 KIAA1109Q2LD37 5005 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 KMT2AQ03164 3969 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 TACC2O95359 2948 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 TSC2P49815 1807 aa-0.01□□□□□ -2.41
VDAC3-212ENST00000524291 TLN2Q9Y4G6 2542 aa-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 SPG11Q96JI7 2443 aa-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 PCNX1Q96RV3 2341 aa-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 BOD1L1Q8NFC6 3051 aa-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 TULP4Q9NRJ4 1543 aa-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 PKD1L1Q8TDX9 2849 aa-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 GNGT2O14610 69 aa-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 DEFB123Q8N688 67 aa-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 PRO1933Q9H354 126 aa-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 PDCD11Q14690 1871 aaKnown RBP-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 SPTAN1Q13813 2472 aaKnown RBP-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 HERC2O95714 4834 aa-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 HMCN2Q8NDA2 5059 aa-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 UTP20O75691 2785 aaKnown RBP-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 CENPEQ02224 2701 aa-0.02□□□□□ -2.41
VDAC3-212ENST00000524291 CRYBG3Q68DQ2 2970 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 APC2O95996 2303 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 HERC1Q15751 4861 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 TRAV30A0A087WSZ9 112 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 TRBV7-4A0A0J9YYF1 115 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 COX6B1P14854 86 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 S100A10P60903 97 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 SPTA1P02549 2419 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 FAM186AA6NE01 2351 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 SPTBN1Q01082 2364 aaKnown RBP-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 WNK1Q9H4A3 2382 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 HYDINQ4G0P3 5121 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 ACACAQ13085 2346 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 PDE4DIPQ5VU43 2346 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 A0A0C4DFX4 3053 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 LYSTQ99698 3801 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 ZFHX3Q15911 3703 aa-0.03□□□□□ -2.41
VDAC3-212ENST00000524291 TNXBP22105 4242 aa-0.04□□□□□ -2.42
VDAC3-212ENST00000524291 PRUNE2Q8WUY3 3088 aa-0.04□□□□□ -2.42
VDAC3-212ENST00000524291 LRBAP50851 2863 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms