RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 SPTBN5Q9NRC6 3674 aaKnown RBP3.45□□□□□ -1.86
EFCAB13-213ENST00000523978 C4AP0C0L4 1744 aa3.45□□□□□ -1.86
EFCAB13-213ENST00000523978 IGKV3-7A0A075B6H7 116 aa3.45□□□□□ -1.86
EFCAB13-213ENST00000523978 A0A0J9YX75 114 aa3.45□□□□□ -1.86
EFCAB13-213ENST00000523978 F8VRH5 84 aa3.45□□□□□ -1.86
EFCAB13-213ENST00000523978 FXYD6P3P58550 94 aa3.45□□□□□ -1.86
EFCAB13-213ENST00000523978 PDE6HQ13956 83 aa3.45□□□□□ -1.86
EFCAB13-213ENST00000523978 HIGD2BQ4VC39 106 aa3.45□□□□□ -1.86
EFCAB13-213ENST00000523978 COX7B2Q8TF08 81 aa3.45□□□□□ -1.86
EFCAB13-213ENST00000523978 MKI67P46013 3256 aaKnown RBP3.45□□□□□ -1.86
EFCAB13-213ENST00000523978 BDP1A6H8Y1 2624 aa3.45□□□□□ -1.86
EFCAB13-213ENST00000523978 PI4KAP42356 2102 aa3.44□□□□□ -1.86
EFCAB13-213ENST00000523978 ABCA7Q8IZY2 2146 aa3.44□□□□□ -1.86
EFCAB13-213ENST00000523978 ENHOQ6UWT2 76 aa3.44□□□□□ -1.86
EFCAB13-213ENST00000523978 TTTY12Q9BZ98 90 aa3.44□□□□□ -1.86
EFCAB13-213ENST00000523978 R4GMQ9 66 aa3.44□□□□□ -1.86
EFCAB13-213ENST00000523978 SETXQ7Z333 2677 aaKnown RBP3.44□□□□□ -1.86
EFCAB13-213ENST00000523978 M0R135 149 aa3.43□□□□□ -1.86
EFCAB13-213ENST00000523978 COX6B1P14854 86 aa3.43□□□□□ -1.86
EFCAB13-213ENST00000523978 CCL18P55774 89 aa3.43□□□□□ -1.86
EFCAB13-213ENST00000523978 KRTAP10-8P60410 259 aa3.43□□□□□ -1.86
EFCAB13-213ENST00000523978 LINC00612Q8N6U2 182 aa3.43□□□□□ -1.86
EFCAB13-213ENST00000523978 LINC00208Q96KT6 92 aa3.43□□□□□ -1.86
EFCAB13-213ENST00000523978 PRO3102Q9H379 93 aa3.43□□□□□ -1.86
EFCAB13-213ENST00000523978 FASNP49327 2511 aaKnown RBP3.43□□□□□ -1.86
EFCAB13-213ENST00000523978 INTS1Q8N201 2190 aaKnown RBP3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 MDC1Q14676 2089 aaKnown RBP3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 ANKRD11Q6UB99 2663 aaPredicted RBP3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 C4BP0C0L5 1744 aa3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 TRBV6-6A0A0A6YYG2 114 aa3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 TRAV21A0A0B4J279 112 aa3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 FAM168BA1KXE4 195 aa3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 M0R3E3 92 aa3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 CCL3L1P16619 93 aa3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 C4orf3Q8WVX3 66 aa3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 TMEM14CQ9P0S9 112 aa3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 RANBP2P49792 3224 aaKnown RBP3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 EPG5Q9HCE0 2579 aa3.42□□□□□ -1.86
EFCAB13-213ENST00000523978 GPR179Q6PRD1 2367 aa3.41□□□□□ -1.86
EFCAB13-213ENST00000523978 C9orf163Q8N9P6 203 aa3.41□□□□□ -1.86
EFCAB13-213ENST00000523978 ZCCHC13Q8WW36 166 aaKnown RBP3.41□□□□□ -1.86
EFCAB13-213ENST00000523978 BRCA2P51587 3418 aa3.41□□□□□ -1.86
EFCAB13-213ENST00000523978 NOTCH2Q04721 2471 aa3.41□□□□□ -1.86
EFCAB13-213ENST00000523978 TPRP12270 2363 aaKnown RBP3.4□□□□□ -1.86
EFCAB13-213ENST00000523978 LRCOL1A6NCL2 159 aa3.4□□□□□ -1.87
EFCAB13-213ENST00000523978 IGIPA6NJ69 53 aa3.4□□□□□ -1.87
EFCAB13-213ENST00000523978 H0Y9P7 68 aa3.4□□□□□ -1.87
EFCAB13-213ENST00000523978 UQCR11O14957 56 aa3.4□□□□□ -1.87
EFCAB13-213ENST00000523978 SPINK4O60575 86 aa3.4□□□□□ -1.87
EFCAB13-213ENST00000523978 MGPP08493 103 aa3.4□□□□□ -1.87
EFCAB13-213ENST00000523978 CR1P17927 2039 aa3.4□□□□□ -1.87
EFCAB13-213ENST00000523978 HCP5Q6MZN7 132 aa3.4□□□□□ -1.87
EFCAB13-213ENST00000523978 LAMA2P24043 3122 aaKnown RBP3.4□□□□□ -1.87
EFCAB13-213ENST00000523978 TET1Q8NFU7 2136 aa3.4□□□□□ -1.87
EFCAB13-213ENST00000523978 FLNBO75369 2602 aaKnown RBP3.4□□□□□ -1.87
EFCAB13-213ENST00000523978 SPTBN4Q9H254 2564 aa3.39□□□□□ -1.87
EFCAB13-213ENST00000523978 NCOR1O75376 2440 aa3.39□□□□□ -1.87
EFCAB13-213ENST00000523978 TRBV6-1A0A0K0K1D8 114 aa3.39□□□□□ -1.87
EFCAB13-213ENST00000523978 JMJD7-PLA2G4BH0Y9G9 81 aa3.39□□□□□ -1.87
EFCAB13-213ENST00000523978 TYMSOSQ8TAI1 123 aa3.39□□□□□ -1.87
EFCAB13-213ENST00000523978 PLXNB2O15031 1838 aa3.39□□□□□ -1.87
EFCAB13-213ENST00000523978 MED12Q93074 2177 aa3.39□□□□□ -1.87
EFCAB13-213ENST00000523978 PTPRZ1P23471 2315 aaPredicted RBP3.38□□□□□ -1.87
EFCAB13-213ENST00000523978 TRAV40A0A0B4J280 105 aa3.38□□□□□ -1.87
EFCAB13-213ENST00000523978 PATE1Q8WXA2 126 aa3.38□□□□□ -1.87
EFCAB13-213ENST00000523978 NAV2Q8IVL1 2488 aa3.37□□□□□ -1.87
EFCAB13-213ENST00000523978 MAST4O15021 2626 aa3.37□□□□□ -1.87
EFCAB13-213ENST00000523978 I3L3M4 83 aa3.37□□□□□ -1.87
EFCAB13-213ENST00000523978 M0R1W7 72 aa3.37□□□□□ -1.87
EFCAB13-213ENST00000523978 PIN1P1O15428 100 aa3.37□□□□□ -1.87
EFCAB13-213ENST00000523978 ZNF137PP52743 207 aa3.37□□□□□ -1.87
EFCAB13-213ENST00000523978 C10orf113Q5VZT2 155 aa3.37□□□□□ -1.87
EFCAB13-213ENST00000523978 WFDC9Q8NEX5 89 aa3.37□□□□□ -1.87
EFCAB13-213ENST00000523978 HIGD2AQ9BW72 106 aa3.37□□□□□ -1.87
EFCAB13-213ENST00000523978 PSORS1C2Q9UIG4 136 aa3.37□□□□□ -1.87
EFCAB13-213ENST00000523978 PRRC2BQ5JSZ5 2229 aaKnown RBP3.37□□□□□ -1.87
EFCAB13-213ENST00000523978 ZFHX3Q15911 3703 aa3.37□□□□□ -1.87
EFCAB13-213ENST00000523978 PDE6GP18545 87 aa3.36□□□□□ -1.87
EFCAB13-213ENST00000523978 SPATA8Q6RVD6 105 aa3.36□□□□□ -1.87
EFCAB13-213ENST00000523978 LINC00322Q6ZN03 302 aaPredicted RBP3.36□□□□□ -1.87
EFCAB13-213ENST00000523978 SPRR4Q96PI1 79 aa3.36□□□□□ -1.87
EFCAB13-213ENST00000523978 TMEM167BQ9NRX6 74 aa3.36□□□□□ -1.87
EFCAB13-213ENST00000523978 COL27A1Q8IZC6 1860 aaPredicted RBP3.36□□□□□ -1.87
EFCAB13-213ENST00000523978 LAMA3Q16787 3333 aa3.36□□□□□ -1.87
EFCAB13-213ENST00000523978 ESPL1Q14674 2120 aa3.35□□□□□ -1.87
EFCAB13-213ENST00000523978 DNAJC13O75165 2243 aa3.35□□□□□ -1.87
EFCAB13-213ENST00000523978 PRUNE2Q8WUY3 3088 aa3.35□□□□□ -1.87
EFCAB13-213ENST00000523978 IGKV3OR2-268A0A0C4DH90 116 aa3.35□□□□□ -1.87
EFCAB13-213ENST00000523978 KRTAP1-4P0C5Y4 121 aa3.35□□□□□ -1.87
EFCAB13-213ENST00000523978 NDPQ00604 133 aa3.35□□□□□ -1.87
EFCAB13-213ENST00000523978 FXYD3Q14802 87 aa3.35□□□□□ -1.87
EFCAB13-213ENST00000523978 DEFB114Q30KQ6 69 aa3.35□□□□□ -1.87
EFCAB13-213ENST00000523978 PRO2289Q9P1D8 64 aa3.35□□□□□ -1.87
EFCAB13-213ENST00000523978 TIMM8BQ9Y5J9 83 aaPredicted RBP3.35□□□□□ -1.87
EFCAB13-213ENST00000523978 CENPFP49454 3210 aa3.35□□□□□ -1.87
EFCAB13-213ENST00000523978 ARHGAP32A7KAX9 2087 aa3.34□□□□□ -1.87
EFCAB13-213ENST00000523978 CHD6Q8TD26 2715 aa3.34□□□□□ -1.87
EFCAB13-213ENST00000523978 CTSGP08311 255 aa3.34□□□□□ -1.87
EFCAB13-213ENST00000523978 SPINK7P58062 85 aa3.34□□□□□ -1.87
EFCAB13-213ENST00000523978 WFDC10AQ9H1F0 79 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms