RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 MND1Q9BWT6 205 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 IGKV1D-37A0A075B6S9 117 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 A0A1B0GV90 55 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 TRDV1A0A1B0GX56 115 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 GRIFINA4D1Z8 144 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 C19orf71A6NCJ1 209 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 LINC00587B1AMM8 73 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 M0R2T5 61 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 M0R378 163 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 TAX1BP3O14907 124 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 TRGC2P03986 189 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 SLC25A4P12235 298 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 S100A4P26447 101 aaKnown RBP2.36□□□□□ -2.03
CPNE3-206ENST00000523469 CNBPP62633 177 aaKnown RBP2.36□□□□□ -2.03
CPNE3-206ENST00000523469 HIST1H4AP62805 103 aaKnown RBP2.36□□□□□ -2.03
CPNE3-206ENST00000523469 QRFPP83859 136 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 AKR1C1Q04828 323 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 MSMO1Q15800 293 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 LGALSLQ3ZCW2 172 aaPredicted RBP2.36□□□□□ -2.03
CPNE3-206ENST00000523469 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 PRR15Q8IV56 129 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 DEFB107AQ8IZN7 70 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 TTTY13Q9BZ97 58 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 SMDT1Q9H4I9 107 aa2.36□□□□□ -2.03
CPNE3-206ENST00000523469 IGHV3-73A0A0B4J1V6 119 aa2.35□□□□□ -2.03
CPNE3-206ENST00000523469 FABP5P3A8MUU1 101 aa2.35□□□□□ -2.03
CPNE3-206ENST00000523469 C1orf196B1AJZ1 125 aa2.35□□□□□ -2.03
CPNE3-206ENST00000523469 CRPP02741 224 aa2.35□□□□□ -2.03
CPNE3-206ENST00000523469 SLC38A11Q08AI6 406 aa2.35□□□□□ -2.03
CPNE3-206ENST00000523469 LINC01554Q52M75 96 aa2.35□□□□□ -2.03
CPNE3-206ENST00000523469 ZNF818PQ6ZRF7 136 aa2.35□□□□□ -2.03
CPNE3-206ENST00000523469 LHFPL1Q86WI0 220 aa2.35□□□□□ -2.03
CPNE3-206ENST00000523469 SLC25A21Q9BQT8 299 aaPredicted RBP2.35□□□□□ -2.03
CPNE3-206ENST00000523469 SLC39A9Q9NUM3 307 aa2.35□□□□□ -2.03
CPNE3-206ENST00000523469 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.34□□□□□ -2.03
CPNE3-206ENST00000523469 MUC21A0A0G2JKD1 596 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 SDHAF1A6NFY7 115 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 C9JAW5 83 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 F8W036 122 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 PPYP01298 95 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 NPYP01303 97 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 HIST1H1DP16402 221 aaKnown RBP2.34□□□□□ -2.03
CPNE3-206ENST00000523469 MT1HP80294 61 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 Q0VG73 95 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 HSD17B12Q53GQ0 312 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 OR10P1Q8NGE3 313 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 TERB2Q8NHR7 220 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 SMCR5Q8TEV8 140 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 OTORQ9NRC9 128 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 HIGD1AQ9Y241 93 aa2.34□□□□□ -2.03
CPNE3-206ENST00000523469 IRGMA1A4Y4 181 aa2.33□□□□□ -2.04
CPNE3-206ENST00000523469 C7orf71A4D174 169 aa2.33□□□□□ -2.04
CPNE3-206ENST00000523469 CCDC160A6NGH7 325 aa2.33□□□□□ -2.04
CPNE3-206ENST00000523469 GABARAPH6UMI1 98 aa2.33□□□□□ -2.04
CPNE3-206ENST00000523469 EIF5AP63241 154 aaKnown RBP2.33□□□□□ -2.04
CPNE3-206ENST00000523469 ELOBQ15370 118 aa2.33□□□□□ -2.04
CPNE3-206ENST00000523469 MIAQ16674 131 aa2.33□□□□□ -2.04
CPNE3-206ENST00000523469 TPRXLQ17RH7 258 aa2.33□□□□□ -2.04
CPNE3-206ENST00000523469 DIRC1Q969H9 104 aa2.33□□□□□ -2.04
CPNE3-206ENST00000523469 RETNLBQ9BQ08 111 aa2.33□□□□□ -2.04
CPNE3-206ENST00000523469 C2orf88Q9BSF0 95 aa2.33□□□□□ -2.04
CPNE3-206ENST00000523469 PRADC1Q9BSG0 188 aa2.33□□□□□ -2.04
CPNE3-206ENST00000523469 U3KQ87 197 aa2.33□□□□□ -2.04
CPNE3-206ENST00000523469 NEBP20929 6669 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 SNRPGP15A8MWD9 76 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 DLEU1O43261 78 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 PGLYRP1O75594 196 aaPredicted RBP2.32□□□□□ -2.04
CPNE3-206ENST00000523469 CDS2O95674 445 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 MT-ND6P03923 174 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 SLC25A5P05141 298 aaKnown RBP2.32□□□□□ -2.04
CPNE3-206ENST00000523469 S100PP25815 95 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 GNG2P59768 71 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 ZNF90Q03938 601 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 RHOHQ15669 191 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 FAM229BQ4G0N7 80 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 MIR17HGQ75NE6 70 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 BPIFA4PQ86YQ2 179 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 TCTE3Q8IZS6 198 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 NAT8BQ9UHF3 227 aa2.32□□□□□ -2.04
CPNE3-206ENST00000523469 J3QQQ9 107 aa2.31□□□□□ -2.04
CPNE3-206ENST00000523469 TMEM256-PLSCR3K7ERE1 68 aa2.31□□□□□ -2.04
CPNE3-206ENST00000523469 DPM2O94777 84 aa2.31□□□□□ -2.04
CPNE3-206ENST00000523469 UCHL1P09936 223 aa2.31□□□□□ -2.04
CPNE3-206ENST00000523469 RNASE4P34096 147 aaKnown RBP2.31□□□□□ -2.04
CPNE3-206ENST00000523469 XCL1P47992 114 aa2.31□□□□□ -2.04
CPNE3-206ENST00000523469 RPS25P62851 125 aaKnown RBP2.31□□□□□ -2.04
CPNE3-206ENST00000523469 UBE2BP63146 152 aa2.31□□□□□ -2.04
CPNE3-206ENST00000523469 COX6A2Q02221 97 aa2.31□□□□□ -2.04
CPNE3-206ENST00000523469 Q5XG85 94 aa2.31□□□□□ -2.04
CPNE3-206ENST00000523469 C2orf91Q6ZV80 131 aa2.31□□□□□ -2.04
CPNE3-206ENST00000523469 HIST3H2BBQ8N257 126 aa2.31□□□□□ -2.04
CPNE3-206ENST00000523469 ZNF431Q8TF32 576 aaPredicted RBP2.31□□□□□ -2.04
CPNE3-206ENST00000523469 MIEN1Q9BRT3 115 aa2.31□□□□□ -2.04
CPNE3-206ENST00000523469 OSTCQ9NRP0 149 aa2.31□□□□□ -2.04
CPNE3-206ENST00000523469 A0A087WWC5 75 aa2.3□□□□□ -2.04
CPNE3-206ENST00000523469 CST7O76096 145 aa2.3□□□□□ -2.04
CPNE3-206ENST00000523469 GZMBP10144 247 aa2.3□□□□□ -2.04
CPNE3-206ENST00000523469 SDC2P34741 201 aa2.3□□□□□ -2.04
CPNE3-206ENST00000523469 RRAS2P62070 204 aaPredicted RBP2.3□□□□□ -2.04
CPNE3-206ENST00000523469 ASB16-AS1Q495Z4 193 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms