RNA–Protein interactions for RNA: ENST00000522788.5

HOXA3-206, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-206ENST00000522788 PACRGQ96M98 296 aaPredicted RBP13.23□□□□□ -0.29
HOXA3-206ENST00000522788 TOMM7Q9P0U1 55 aa13.23□□□□□ -0.29
HOXA3-206ENST00000522788 PLA2G2DQ9UNK4 145 aa13.23□□□□□ -0.29
HOXA3-206ENST00000522788 PRSS2P07478 247 aa13.21□□□□□ -0.29
HOXA3-206ENST00000522788 C9orf129Q5T035 196 aaKnown RBP13.21□□□□□ -0.29
HOXA3-206ENST00000522788 FAM19A5Q7Z5A7 132 aaPredicted RBP13.21□□□□□ -0.29
HOXA3-206ENST00000522788 GEMIN7Q9H840 131 aaKnown RBP13.21□□□□□ -0.29
HOXA3-206ENST00000522788 C6orf226Q5I0X4 101 aa13.2□□□□□ -0.3
HOXA3-206ENST00000522788 LINC01549A6NIU2 74 aa13.19□□□□□ -0.3
HOXA3-206ENST00000522788 KRTAP10-8P60410 259 aa13.19□□□□□ -0.3
HOXA3-206ENST00000522788 C1orf137Q5JT78 98 aa13.19□□□□□ -0.3
HOXA3-206ENST00000522788 REG3GQ6UW15 175 aa13.19□□□□□ -0.3
HOXA3-206ENST00000522788 FA2HQ7L5A8 372 aa13.19□□□□□ -0.3
HOXA3-206ENST00000522788 IGLV5-45A0A087WSX0 123 aa13.18□□□□□ -0.3
HOXA3-206ENST00000522788 CKS1BP61024 79 aa13.18□□□□□ -0.3
HOXA3-206ENST00000522788 CST9LQ9H4G1 147 aa13.18□□□□□ -0.3
HOXA3-206ENST00000522788 TINCRA0A1B0GVN0 87 aa13.17□□□□□ -0.3
HOXA3-206ENST00000522788 SMIM1B2RUZ4 78 aa13.17□□□□□ -0.3
HOXA3-206ENST00000522788 LINC00469Q8N7U9 141 aa13.17□□□□□ -0.3
HOXA3-206ENST00000522788 URB1-AS1Q96HZ7 61 aa13.17□□□□□ -0.3
HOXA3-206ENST00000522788 SMCO4Q9NRQ5 59 aa13.16□□□□□ -0.3
HOXA3-206ENST00000522788 UBR4Q5T4S7 5183 aa13.16□□□□□ -0.3
HOXA3-206ENST00000522788 A0A096LNJ9 63 aa13.15□□□□□ -0.3
HOXA3-206ENST00000522788 M0QXV9 152 aa13.15□□□□□ -0.3
HOXA3-206ENST00000522788 APOC3P02656 99 aa13.15□□□□□ -0.3
HOXA3-206ENST00000522788 ODF1Q14990 250 aa13.15□□□□□ -0.3
HOXA3-206ENST00000522788 TRAPPC1Q9Y5R8 145 aa13.15□□□□□ -0.3
HOXA3-206ENST00000522788 IGLV7-43P04211 117 aa13.14□□□□□ -0.31
HOXA3-206ENST00000522788 PMVKQ15126 192 aa13.14□□□□□ -0.31
HOXA3-206ENST00000522788 F8VRH5 84 aa13.13□□□□□ -0.31
HOXA3-206ENST00000522788 PDZD11Q5EBL8 140 aa13.13□□□□□ -0.31
HOXA3-206ENST00000522788 C18orf32Q8TCD1 76 aa13.13□□□□□ -0.31
HOXA3-206ENST00000522788 CXCL5P42830 114 aa13.12□□□□□ -0.31
HOXA3-206ENST00000522788 XAGE1AQ9HD64 81 aa13.11□□□□□ -0.31
HOXA3-206ENST00000522788 SNAPINO95295 136 aa13.1□□□□□ -0.31
HOXA3-206ENST00000522788 LINC00614P0C842 121 aa13.1□□□□□ -0.31
HOXA3-206ENST00000522788 SVBPQ8N300 66 aa13.1□□□□□ -0.31
HOXA3-206ENST00000522788 COX7B2Q8TF08 81 aa13.1□□□□□ -0.31
HOXA3-206ENST00000522788 SPINK8P0C7L1 97 aa13.09□□□□□ -0.31
HOXA3-206ENST00000522788 UBE2BP63146 152 aa13.08□□□□□ -0.32
HOXA3-206ENST00000522788 YPEL4Q96NS1 127 aa13.08□□□□□ -0.32
HOXA3-206ENST00000522788 IGLC3P0DOY3 106 aa13.07□□□□□ -0.32
HOXA3-206ENST00000522788 NDUFA5Q16718 116 aa13.07□□□□□ -0.32
HOXA3-206ENST00000522788 C22orf24Q9Y442 160 aa13.07□□□□□ -0.32
HOXA3-206ENST00000522788 HBDP02042 147 aa13.06□□□□□ -0.32
HOXA3-206ENST00000522788 PMCHL1Q16048 86 aa13.06□□□□□ -0.32
HOXA3-206ENST00000522788 DIRC1Q969H9 104 aa13.06□□□□□ -0.32
HOXA3-206ENST00000522788 LRP2P98164 4655 aa13.06□□□□□ -0.32
HOXA3-206ENST00000522788 H0Y9J4 135 aa13.04□□□□□ -0.32
HOXA3-206ENST00000522788 IGLV5-39A0A0G2JS06 123 aa13.02□□□□□ -0.33
HOXA3-206ENST00000522788 H3BRM9 83 aa13.02□□□□□ -0.33
HOXA3-206ENST00000522788 ZNF22P17026 224 aaPredicted RBP13.02□□□□□ -0.33
HOXA3-206ENST00000522788 NDUFA6P56556 154 aa13.02□□□□□ -0.33
HOXA3-206ENST00000522788 RAB5BP61020 215 aa13.01□□□□□ -0.33
HOXA3-206ENST00000522788 TP73-AS1Q9UF72 201 aa13.01□□□□□ -0.33
HOXA3-206ENST00000522788 KRTAP1-4P0C5Y4 121 aa13□□□□□ -0.33
HOXA3-206ENST00000522788 LBHQ53QV2 105 aaPredicted RBP13□□□□□ -0.33
HOXA3-206ENST00000522788 ATP5LO75964 103 aa12.98□□□□□ -0.33
HOXA3-206ENST00000522788 MRPL55Q7Z7F7 128 aaKnown RBP12.98□□□□□ -0.33
HOXA3-206ENST00000522788 PRR26Q8N8Z3 221 aa12.98□□□□□ -0.33
HOXA3-206ENST00000522788 C11orf86A6NJI1 115 aa12.97□□□□□ -0.33
HOXA3-206ENST00000522788 BAGE3Q86Y29 109 aa12.97□□□□□ -0.33
HOXA3-206ENST00000522788 NUPR1O60356 82 aa12.96□□□□□ -0.33
HOXA3-206ENST00000522788 ZNF861PO60384 105 aa12.95□□□□□ -0.34
HOXA3-206ENST00000522788 LINC00167Q96N53 147 aa12.95□□□□□ -0.34
HOXA3-206ENST00000522788 IGLV5-37A0A075B6J1 123 aa12.94□□□□□ -0.34
HOXA3-206ENST00000522788 CBLN2Q8IUK8 224 aa12.94□□□□□ -0.34
HOXA3-206ENST00000522788 CHCHD1Q96BP2 118 aaKnown RBP12.94□□□□□ -0.34
HOXA3-206ENST00000522788 RPL37AP8A6NKH3 93 aa12.91□□□□□ -0.34
HOXA3-206ENST00000522788 PFN2P35080 140 aa12.91□□□□□ -0.34
HOXA3-206ENST00000522788 CHTOPQ9Y3Y2 248 aaKnown RBP12.91□□□□□ -0.34
HOXA3-206ENST00000522788 IGLV1-50A0A075B6I6 118 aa12.9□□□□□ -0.34
HOXA3-206ENST00000522788 TMEM170BQ5T4T1 132 aa12.9□□□□□ -0.34
HOXA3-206ENST00000522788 GAGE10A6NGK3 116 aa12.89□□□□□ -0.35
HOXA3-206ENST00000522788 BCE1O60756 84 aa12.89□□□□□ -0.35
HOXA3-206ENST00000522788 ERG28Q9UKR5 140 aa12.89□□□□□ -0.35
HOXA3-206ENST00000522788 TRAV12-1A0A0B4J245 112 aa12.88□□□□□ -0.35
HOXA3-206ENST00000522788 IFI27L1Q96BM0 104 aa12.88□□□□□ -0.35
HOXA3-206ENST00000522788 SCO1O75880 301 aa12.87□□□□□ -0.35
HOXA3-206ENST00000522788 ZNF625Q96I27 306 aaPredicted RBP12.87□□□□□ -0.35
HOXA3-206ENST00000522788 SND1-IT1Q9HBX3 110 aa12.87□□□□□ -0.35
HOXA3-206ENST00000522788 COX17Q14061 63 aa12.86□□□□□ -0.35
HOXA3-206ENST00000522788 TMEM223A0PJW6 202 aa12.85□□□□□ -0.35
HOXA3-206ENST00000522788 TRGC2P03986 189 aa12.85□□□□□ -0.35
HOXA3-206ENST00000522788 VPREB1P12018 145 aa12.85□□□□□ -0.35
HOXA3-206ENST00000522788 NKAPP1Q8N9T2 125 aa12.85□□□□□ -0.35
HOXA3-206ENST00000522788 LPAP08519 4548 aa12.84□□□□□ -0.35
HOXA3-206ENST00000522788 RPL28P46779 137 aaKnown RBP12.84□□□□□ -0.35
HOXA3-206ENST00000522788 SLC7A5P1Q8MH63 180 aa12.84□□□□□ -0.35
HOXA3-206ENST00000522788 FAM19A2Q8N3H0 131 aa12.84□□□□□ -0.35
HOXA3-206ENST00000522788 Q8NDZ9 215 aa12.84□□□□□ -0.35
HOXA3-206ENST00000522788 SFTA2Q6UW10 78 aa12.83□□□□□ -0.36
HOXA3-206ENST00000522788 KRTAP13-1Q8IUC0 172 aa12.83□□□□□ -0.36
HOXA3-206ENST00000522788 HSBP1O75506 76 aa12.82□□□□□ -0.36
HOXA3-206ENST00000522788 LINC00310P59036 64 aa12.82□□□□□ -0.36
HOXA3-206ENST00000522788 IGKV2-28A0A075B6P5 120 aa12.8□□□□□ -0.36
HOXA3-206ENST00000522788 IGKV2D-28P01615 120 aa12.8□□□□□ -0.36
HOXA3-206ENST00000522788 RPL13AP40429 203 aaKnown RBP12.8□□□□□ -0.36
HOXA3-206ENST00000522788 SERF1AO75920 110 aa12.77□□□□□ -0.37
HOXA3-206ENST00000522788 RPL24P83731 157 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms