RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 NOTCH2Q04721 2471 aa8.12□□□□□ -1.11
LAMA4-219ENST00000522006 LINC01556Q5JQF7 62 aa8.12□□□□□ -1.11
LAMA4-219ENST00000522006 SMR3AQ99954 134 aa8.12□□□□□ -1.11
LAMA4-219ENST00000522006 SPINK1P00995 79 aa8.12□□□□□ -1.11
LAMA4-219ENST00000522006 IGLV1-51P01701 117 aa8.11□□□□□ -1.11
LAMA4-219ENST00000522006 A0A096LNJ9 63 aa8.11□□□□□ -1.11
LAMA4-219ENST00000522006 Q6ZTC4 211 aa8.11□□□□□ -1.11
LAMA4-219ENST00000522006 A0A087WSZ3 146 aa8.11□□□□□ -1.11
LAMA4-219ENST00000522006 ANKHD1Q8IWZ3 2542 aaKnown RBP8.1□□□□□ -1.11
LAMA4-219ENST00000522006 HCG22E2RYF7 251 aa8.09□□□□□ -1.11
LAMA4-219ENST00000522006 CRYGAP11844 174 aa8.09□□□□□ -1.11
LAMA4-219ENST00000522006 COX8CQ7Z4L0 72 aa8.09□□□□□ -1.11
LAMA4-219ENST00000522006 A8MTW9 85 aa8.09□□□□□ -1.11
LAMA4-219ENST00000522006 F8WDY8 70 aa8.08□□□□□ -1.12
LAMA4-219ENST00000522006 SBSPONQ8IVN8 264 aa8.08□□□□□ -1.12
LAMA4-219ENST00000522006 RAI1Q7Z5J4 1906 aaPredicted RBP8.08□□□□□ -1.12
LAMA4-219ENST00000522006 LINC00846Q9NV44 126 aa8.08□□□□□ -1.12
LAMA4-219ENST00000522006 TMEM254Q8TBM7 123 aa8.08□□□□□ -1.12
LAMA4-219ENST00000522006 OTOGLQ3ZCN5 2332 aa8.08□□□□□ -1.12
LAMA4-219ENST00000522006 C2orf48Q96LS8 159 aa8.07□□□□□ -1.12
LAMA4-219ENST00000522006 CACNA1AO00555 2505 aa8.07□□□□□ -1.12
LAMA4-219ENST00000522006 A0A1B0GUV1 79 aa8.06□□□□□ -1.12
LAMA4-219ENST00000522006 LYPD5Q6UWN5 251 aa8.06□□□□□ -1.12
LAMA4-219ENST00000522006 ARHGAP32A7KAX9 2087 aa8.06□□□□□ -1.12
LAMA4-219ENST00000522006 PLA2G2AP14555 144 aa8.06□□□□□ -1.12
LAMA4-219ENST00000522006 LINC01561Q8N1V8 128 aa8.05□□□□□ -1.12
LAMA4-219ENST00000522006 PRR14LQ5THK1 2151 aa8.05□□□□□ -1.12
LAMA4-219ENST00000522006 HIVEP2P31629 2446 aa8.05□□□□□ -1.12
LAMA4-219ENST00000522006 CPAMD8Q8IZJ3 1885 aa8.05□□□□□ -1.12
LAMA4-219ENST00000522006 KRTAP10-9P60411 292 aa8.05□□□□□ -1.12
LAMA4-219ENST00000522006 C16orf95Q9H693 158 aa8.05□□□□□ -1.12
LAMA4-219ENST00000522006 LRP4O75096 1905 aa8.05□□□□□ -1.12
LAMA4-219ENST00000522006 CSPG4Q6UVK1 2322 aa8.05□□□□□ -1.12
LAMA4-219ENST00000522006 Q6ZRU5 148 aa8.04□□□□□ -1.12
LAMA4-219ENST00000522006 LINC00337Q8N6G1 96 aa8.04□□□□□ -1.12
LAMA4-219ENST00000522006 PRLHP81277 87 aa8.04□□□□□ -1.12
LAMA4-219ENST00000522006 hDV103S1A0JD37 113 aa8.03□□□□□ -1.12
LAMA4-219ENST00000522006 CXCL6P80162 114 aa8.03□□□□□ -1.12
LAMA4-219ENST00000522006 PLXNB1O43157 2135 aa8.03□□□□□ -1.12
LAMA4-219ENST00000522006 PTPRSQ13332 1948 aa8.03□□□□□ -1.12
LAMA4-219ENST00000522006 C1orf64Q8NEQ6 169 aa8.02□□□□□ -1.13
LAMA4-219ENST00000522006 Q9UF83 564 aa8.02□□□□□ -1.13
LAMA4-219ENST00000522006 SMIM29Q86T20 159 aa8.02□□□□□ -1.13
LAMA4-219ENST00000522006 CDIP1Q9H305 208 aa8.02□□□□□ -1.13
LAMA4-219ENST00000522006 PTPN13Q12923 2485 aa8.02□□□□□ -1.13
LAMA4-219ENST00000522006 PRO0628Q9UI54 55 aa8.01□□□□□ -1.13
LAMA4-219ENST00000522006 SMCR5Q8TEV8 140 aa8□□□□□ -1.13
LAMA4-219ENST00000522006 C22orf24Q9Y442 160 aa8□□□□□ -1.13
LAMA4-219ENST00000522006 C1orf134Q5TEV5 83 aa8□□□□□ -1.13
LAMA4-219ENST00000522006 LIMD2Q9BT23 127 aa7.99□□□□□ -1.13
LAMA4-219ENST00000522006 KIAA0087Q14695 138 aa7.99□□□□□ -1.13
LAMA4-219ENST00000522006 EXPH5Q8NEV8 1989 aa7.99□□□□□ -1.13
LAMA4-219ENST00000522006 C7orf65Q6ZTY9 151 aa7.99□□□□□ -1.13
LAMA4-219ENST00000522006 LINC01546A6NGU7 62 aa7.98□□□□□ -1.13
LAMA4-219ENST00000522006 SPATA3Q8NHX4 192 aa7.97□□□□□ -1.13
LAMA4-219ENST00000522006 COL5A1P20908 1838 aaPredicted RBP7.97□□□□□ -1.13
LAMA4-219ENST00000522006 IGKV2D-30A0A075B6S6 120 aa7.97□□□□□ -1.13
LAMA4-219ENST00000522006 IGKV2-30P06310 120 aa7.97□□□□□ -1.13
LAMA4-219ENST00000522006 KIF25-AS1Q9Y6Z4 181 aa7.96□□□□□ -1.13
LAMA4-219ENST00000522006 ATRXP46100 2492 aa7.96□□□□□ -1.13
LAMA4-219ENST00000522006 A0A1W2PPR1 153 aa7.96□□□□□ -1.13
LAMA4-219ENST00000522006 IGLV5-39A0A0G2JS06 123 aa7.96□□□□□ -1.14
LAMA4-219ENST00000522006 Q8N2B8 174 aa7.96□□□□□ -1.14
LAMA4-219ENST00000522006 C10orf142B7Z368 130 aa7.95□□□□□ -1.14
LAMA4-219ENST00000522006 NCOR2Q9Y618 2525 aa7.95□□□□□ -1.14
LAMA4-219ENST00000522006 WNK1Q9H4A3 2382 aa7.95□□□□□ -1.14
LAMA4-219ENST00000522006 C11orf72Q8NBR9 251 aa7.95□□□□□ -1.14
LAMA4-219ENST00000522006 SONP18583 2426 aaKnown RBP7.95□□□□□ -1.14
LAMA4-219ENST00000522006 A0A1B0GU69 56 aa7.94□□□□□ -1.14
LAMA4-219ENST00000522006 PIEZO1Q92508 2521 aa7.94□□□□□ -1.14
LAMA4-219ENST00000522006 ADAMTS20P59510 1910 aa7.94□□□□□ -1.14
LAMA4-219ENST00000522006 FSHBP01225 129 aa7.93□□□□□ -1.14
LAMA4-219ENST00000522006 SORL1Q92673 2214 aa7.92□□□□□ -1.14
LAMA4-219ENST00000522006 IGF2RP11717 2491 aa7.92□□□□□ -1.14
LAMA4-219ENST00000522006 PIEZO2Q9H5I5 2752 aa7.92□□□□□ -1.14
LAMA4-219ENST00000522006 SMCPP49901 116 aaPredicted RBP7.91□□□□□ -1.14
LAMA4-219ENST00000522006 FHL3Q13643 280 aa7.91□□□□□ -1.14
LAMA4-219ENST00000522006 FAM218AQ96MZ4 157 aa7.91□□□□□ -1.14
LAMA4-219ENST00000522006 ACYP2P14621 99 aa7.9□□□□□ -1.14
LAMA4-219ENST00000522006 LINC00167Q96N53 147 aa7.9□□□□□ -1.14
LAMA4-219ENST00000522006 MOBPQ13875 183 aa7.9□□□□□ -1.15
LAMA4-219ENST00000522006 TP53AIP1Q9HCN2 124 aa7.9□□□□□ -1.15
LAMA4-219ENST00000522006 C6orf48Q9UBA6 75 aa7.9□□□□□ -1.15
LAMA4-219ENST00000522006 IGHV3OR16-9A0A0B4J2B5 98 aa7.9□□□□□ -1.15
LAMA4-219ENST00000522006 C4orf26Q17RF5 130 aa7.9□□□□□ -1.15
LAMA4-219ENST00000522006 AGRNO00468 2067 aa7.9□□□□□ -1.15
LAMA4-219ENST00000522006 SPAG11AQ6PDA7 123 aa7.89□□□□□ -1.15
LAMA4-219ENST00000522006 FAM19A4Q96LR4 140 aa7.89□□□□□ -1.15
LAMA4-219ENST00000522006 NAV2Q8IVL1 2488 aa7.89□□□□□ -1.15
LAMA4-219ENST00000522006 SPACA4Q8TDM5 124 aa7.88□□□□□ -1.15
LAMA4-219ENST00000522006 CCDC168Q8NDH2 2452 aa7.88□□□□□ -1.15
LAMA4-219ENST00000522006 LINC00315P59091 139 aa7.88□□□□□ -1.15
LAMA4-219ENST00000522006 ELOF1P60002 83 aaKnown RBP7.88□□□□□ -1.15
LAMA4-219ENST00000522006 RPS28P62857 69 aaKnown RBP7.88□□□□□ -1.15
LAMA4-219ENST00000522006 HIVEP3Q5T1R4 2406 aa7.87□□□□□ -1.15
LAMA4-219ENST00000522006 Q6ZQT0 140 aa7.86□□□□□ -1.15
LAMA4-219ENST00000522006 WDR87Q6ZQQ6 2873 aa7.86□□□□□ -1.15
LAMA4-219ENST00000522006 BCE1O60756 84 aa7.86□□□□□ -1.15
LAMA4-219ENST00000522006 MDFIQ99750 246 aa7.85□□□□□ -1.15
LAMA4-219ENST00000522006 IGLV5-45A0A087WSX0 123 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms