RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 PRIMA1Q86XR5 153 aa4.62□□□□□ -1.67
CTNNA1-228ENST00000521640 MUC7Q8TAX7 377 aa4.62□□□□□ -1.67
CTNNA1-228ENST00000521640 COX7B2Q8TF08 81 aa4.62□□□□□ -1.67
CTNNA1-228ENST00000521640 NAA38Q9BRA0 125 aaKnown RBP4.62□□□□□ -1.67
CTNNA1-228ENST00000521640 NOTCH3Q9UM47 2321 aa4.62□□□□□ -1.67
CTNNA1-228ENST00000521640 F8P00451 2351 aa4.62□□□□□ -1.67
CTNNA1-228ENST00000521640 IBA57-AS1B1ANH7 110 aa4.61□□□□□ -1.67
CTNNA1-228ENST00000521640 CXCL5P42830 114 aa4.61□□□□□ -1.67
CTNNA1-228ENST00000521640 ADAMTSL4-AS1Q5T5F5 129 aa4.61□□□□□ -1.67
CTNNA1-228ENST00000521640 Q8IZM0 81 aa4.61□□□□□ -1.67
CTNNA1-228ENST00000521640 LINC00308Q8TCZ7 52 aa4.61□□□□□ -1.67
CTNNA1-228ENST00000521640 NTN5Q8WTR8 489 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-228ENST00000521640 PRO0461Q9UI25 63 aa4.61□□□□□ -1.67
CTNNA1-228ENST00000521640 CELA1Q9UNI1 258 aa4.61□□□□□ -1.67
CTNNA1-228ENST00000521640 TEP1Q99973 2627 aaKnown RBP4.6□□□□□ -1.67
CTNNA1-228ENST00000521640 J3QR89 54 aa4.6□□□□□ -1.67
CTNNA1-228ENST00000521640 PRSS2P07478 247 aa4.6□□□□□ -1.67
CTNNA1-228ENST00000521640 COX6CP09669 75 aa4.6□□□□□ -1.67
CTNNA1-228ENST00000521640 KRTAP10-11P60412 298 aa4.6□□□□□ -1.67
CTNNA1-228ENST00000521640 MEIG1Q5JSS6 88 aa4.6□□□□□ -1.67
CTNNA1-228ENST00000521640 CD164L2Q6UWJ8 174 aa4.6□□□□□ -1.67
CTNNA1-228ENST00000521640 A0A096LPF7 62 aa4.59□□□□□ -1.67
CTNNA1-228ENST00000521640 LOC107984156A0A0G2JMH3 177 aa4.59□□□□□ -1.67
CTNNA1-228ENST00000521640 TMEM262E9PQX1 116 aa4.59□□□□□ -1.67
CTNNA1-228ENST00000521640 H3BMG7 143 aa4.59□□□□□ -1.67
CTNNA1-228ENST00000521640 ARL17AQ8IVW1 177 aa4.59□□□□□ -1.67
CTNNA1-228ENST00000521640 PRR34Q9NV39 138 aa4.59□□□□□ -1.67
CTNNA1-228ENST00000521640 TRAV8-4A0A0B4J246 113 aa4.58□□□□□ -1.68
CTNNA1-228ENST00000521640 G3V4G9 280 aa4.58□□□□□ -1.68
CTNNA1-228ENST00000521640 PSMB2P49721 201 aa4.58□□□□□ -1.68
CTNNA1-228ENST00000521640 COX17Q14061 63 aa4.58□□□□□ -1.68
CTNNA1-228ENST00000521640 ATXN8Q156A1 80 aa4.58□□□□□ -1.68
CTNNA1-228ENST00000521640 CBY1Q9Y3M2 126 aa4.58□□□□□ -1.68
CTNNA1-228ENST00000521640 ATRQ13535 2644 aa4.58□□□□□ -1.68
CTNNA1-228ENST00000521640 TRAV13-2A0A0B4J235 113 aa4.57□□□□□ -1.68
CTNNA1-228ENST00000521640 COX7A2LO14548 114 aa4.57□□□□□ -1.68
CTNNA1-228ENST00000521640 DEFB4AO15263 64 aa4.57□□□□□ -1.68
CTNNA1-228ENST00000521640 TCL1BO95988 128 aa4.57□□□□□ -1.68
CTNNA1-228ENST00000521640 SCGB1C2P0DMR2 95 aa4.57□□□□□ -1.68
CTNNA1-228ENST00000521640 REG3AQ06141 175 aa4.57□□□□□ -1.68
CTNNA1-228ENST00000521640 Q1RN00 199 aa4.57□□□□□ -1.68
CTNNA1-228ENST00000521640 KPRPQ5T749 579 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-228ENST00000521640 H3BT86 120 aa4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 ANGP03950 147 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 RPL13AP40429 203 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 XCL1P47992 114 aa4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 WFDC2Q14508 124 aa4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 LYPD5Q6UWN5 251 aa4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 SOSTDC1Q6X4U4 206 aa4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 TEN1Q86WV5 123 aa4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 LINC00269Q8N2A0 174 aa4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 CHCHD10Q8WYQ3 142 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 KLK5Q9Y337 293 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 NIPBLQ6KC79 2804 aaeCLIP4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 TENM1Q9UKZ4 2725 aa4.56□□□□□ -1.68
CTNNA1-228ENST00000521640 IGKV3OR2-268A0A0C4DH90 116 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 F8WDY8 70 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 LST1O00453 97 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 NDUFC2O95298 119 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 PCP4P48539 62 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 KIAA0087Q14695 138 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 LINC01620Q4KN68 170 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 C6orf226Q5I0X4 101 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 C5orf38Q86SI9 138 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 MIR7-3HGQ8N6C7 128 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 CARD19Q96LW7 228 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 TM2D3Q9BRN9 247 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 TOMM7Q9P0U1 55 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 VWFP04275 2813 aa4.55□□□□□ -1.68
CTNNA1-228ENST00000521640 GVQW2A0A096LPI5 108 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 TRBV10-2A0A0K0K1G8 114 aa4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 SLC25A20O43772 301 aa4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 CRPP02741 224 aa4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 HTN3P15516 51 aa4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 RPL28P46779 137 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 CKS1BP61024 79 aa4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 ETDBQ3ZM63 59 aa4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 DAND5Q8N907 189 aa4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 C15orf53Q8NAA6 179 aa4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 C11orf45Q8TAV5 145 aa4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 PPDPFLQ8WWR9 84 aa4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 SND1-IT1Q9HBX3 110 aa4.54□□□□□ -1.68
CTNNA1-228ENST00000521640 TRAV10A0A0B4J240 114 aa4.53□□□□□ -1.68
CTNNA1-228ENST00000521640 A0A0J9YWU9 116 aa4.53□□□□□ -1.68
CTNNA1-228ENST00000521640 TRACP01848 142 aa4.53□□□□□ -1.68
CTNNA1-228ENST00000521640 LINC00158P58513 81 aa4.53□□□□□ -1.68
CTNNA1-228ENST00000521640 LINC01556Q5JQF7 62 aa4.53□□□□□ -1.68
CTNNA1-228ENST00000521640 Q6ZTC4 211 aa4.53□□□□□ -1.68
CTNNA1-228ENST00000521640 ANKRD29Q8N6D5 301 aa4.53□□□□□ -1.68
CTNNA1-228ENST00000521640 VPS25Q9BRG1 176 aa4.53□□□□□ -1.68
CTNNA1-228ENST00000521640 DEFB131BA0A096LNP1 70 aa4.52□□□□□ -1.69
CTNNA1-228ENST00000521640 C9JAW5 83 aa4.52□□□□□ -1.69
CTNNA1-228ENST00000521640 H0YGX0 51 aa4.52□□□□□ -1.69
CTNNA1-228ENST00000521640 H7C2G1 150 aa4.52□□□□□ -1.69
CTNNA1-228ENST00000521640 CCL18P55774 89 aa4.52□□□□□ -1.69
CTNNA1-228ENST00000521640 NPC2P61916 151 aa4.52□□□□□ -1.69
CTNNA1-228ENST00000521640 ENHOQ6UWT2 76 aa4.52□□□□□ -1.69
CTNNA1-228ENST00000521640 RETNQ9HD89 108 aa4.52□□□□□ -1.69
CTNNA1-228ENST00000521640 IGKV2-28A0A075B6P5 120 aa4.51□□□□□ -1.69
CTNNA1-228ENST00000521640 A0A1B0GX51 115 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms