RNA–Protein interactions for RNA: ENST00000521588.3

R3HCC1-207, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene R3HCC1, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-207ENST00000521588 COX19Q49B96 90 aa11.8□□□□□ -0.52
R3HCC1-207ENST00000521588 C6orf226Q5I0X4 101 aa11.8□□□□□ -0.52
R3HCC1-207ENST00000521588 C9orf129Q5T035 196 aaKnown RBP11.8□□□□□ -0.52
R3HCC1-207ENST00000521588 FAM19A5Q7Z5A7 132 aaPredicted RBP11.8□□□□□ -0.52
R3HCC1-207ENST00000521588 SCGB3A1Q96QR1 104 aa11.8□□□□□ -0.52
R3HCC1-207ENST00000521588 ODF1Q14990 250 aa11.79□□□□□ -0.52
R3HCC1-207ENST00000521588 TOMM7Q9P0U1 55 aa11.79□□□□□ -0.52
R3HCC1-207ENST00000521588 CARHSP1Q9Y2V2 147 aaKnown RBP11.79□□□□□ -0.52
R3HCC1-207ENST00000521588 LINC01549A6NIU2 74 aa11.78□□□□□ -0.52
R3HCC1-207ENST00000521588 IGLV7-43P04211 117 aa11.78□□□□□ -0.52
R3HCC1-207ENST00000521588 CKS1BP61024 79 aa11.78□□□□□ -0.52
R3HCC1-207ENST00000521588 GEMIN7Q9H840 131 aaKnown RBP11.78□□□□□ -0.52
R3HCC1-207ENST00000521588 LRP2P98164 4655 aa11.77□□□□□ -0.52
R3HCC1-207ENST00000521588 RHEBQ15382 184 aa11.76□□□□□ -0.53
R3HCC1-207ENST00000521588 MRPL18Q9H0U6 180 aaKnown RBP11.76□□□□□ -0.53
R3HCC1-207ENST00000521588 TINCRA0A1B0GVN0 87 aa11.75□□□□□ -0.53
R3HCC1-207ENST00000521588 M0QXV9 152 aa11.75□□□□□ -0.53
R3HCC1-207ENST00000521588 FABP9Q0Z7S8 132 aa11.75□□□□□ -0.53
R3HCC1-207ENST00000521588 RPS10P5Q9NQ39 176 aa11.75□□□□□ -0.53
R3HCC1-207ENST00000521588 IGLV5-45A0A087WSX0 123 aa11.74□□□□□ -0.53
R3HCC1-207ENST00000521588 CST9LQ9H4G1 147 aa11.74□□□□□ -0.53
R3HCC1-207ENST00000521588 SMIM1B2RUZ4 78 aa11.73□□□□□ -0.53
R3HCC1-207ENST00000521588 F8VRH5 84 aa11.73□□□□□ -0.53
R3HCC1-207ENST00000521588 LINC00469Q8N7U9 141 aa11.73□□□□□ -0.53
R3HCC1-207ENST00000521588 DIRC1Q969H9 104 aa11.73□□□□□ -0.53
R3HCC1-207ENST00000521588 PDZD11Q5EBL8 140 aa11.72□□□□□ -0.53
R3HCC1-207ENST00000521588 FA2HQ7L5A8 372 aa11.72□□□□□ -0.53
R3HCC1-207ENST00000521588 CXCL5P42830 114 aa11.71□□□□□ -0.53
R3HCC1-207ENST00000521588 PMVKQ15126 192 aa11.71□□□□□ -0.53
R3HCC1-207ENST00000521588 H0Y9J4 135 aa11.7□□□□□ -0.54
R3HCC1-207ENST00000521588 UBE2BP63146 152 aa11.7□□□□□ -0.54
R3HCC1-207ENST00000521588 XAGE1AQ9HD64 81 aa11.7□□□□□ -0.54
R3HCC1-207ENST00000521588 SMCO4Q9NRQ5 59 aa11.7□□□□□ -0.54
R3HCC1-207ENST00000521588 COX7B2Q8TF08 81 aa11.69□□□□□ -0.54
R3HCC1-207ENST00000521588 URB1-AS1Q96HZ7 61 aa11.69□□□□□ -0.54
R3HCC1-207ENST00000521588 C22orf24Q9Y442 160 aa11.69□□□□□ -0.54
R3HCC1-207ENST00000521588 A0A096LNJ9 63 aa11.67□□□□□ -0.54
R3HCC1-207ENST00000521588 C18orf32Q8TCD1 76 aa11.66□□□□□ -0.54
R3HCC1-207ENST00000521588 TRAPPC1Q9Y5R8 145 aa11.66□□□□□ -0.54
R3HCC1-207ENST00000521588 SPINK8P0C7L1 97 aa11.65□□□□□ -0.54
R3HCC1-207ENST00000521588 PRR26Q8N8Z3 221 aa11.65□□□□□ -0.54
R3HCC1-207ENST00000521588 KRTAP1-4P0C5Y4 121 aa11.64□□□□□ -0.55
R3HCC1-207ENST00000521588 LINC00614P0C842 121 aa11.64□□□□□ -0.55
R3HCC1-207ENST00000521588 LBHQ53QV2 105 aaPredicted RBP11.64□□□□□ -0.55
R3HCC1-207ENST00000521588 TP73-AS1Q9UF72 201 aa11.64□□□□□ -0.55
R3HCC1-207ENST00000521588 APOC3P02656 99 aa11.63□□□□□ -0.55
R3HCC1-207ENST00000521588 IGLC3P0DOY3 106 aa11.63□□□□□ -0.55
R3HCC1-207ENST00000521588 IGLV5-39A0A0G2JS06 123 aa11.61□□□□□ -0.55
R3HCC1-207ENST00000521588 H3BRM9 83 aa11.61□□□□□ -0.55
R3HCC1-207ENST00000521588 NUPR1O60356 82 aa11.61□□□□□ -0.55
R3HCC1-207ENST00000521588 MRPL55Q7Z7F7 128 aaKnown RBP11.61□□□□□ -0.55
R3HCC1-207ENST00000521588 IGLV1-50A0A075B6I6 118 aa11.6□□□□□ -0.55
R3HCC1-207ENST00000521588 ZNF861PO60384 105 aa11.6□□□□□ -0.55
R3HCC1-207ENST00000521588 SNAPINO95295 136 aa11.6□□□□□ -0.55
R3HCC1-207ENST00000521588 HBDP02042 147 aa11.6□□□□□ -0.55
R3HCC1-207ENST00000521588 RAB5BP61020 215 aa11.59□□□□□ -0.55
R3HCC1-207ENST00000521588 SVBPQ8N300 66 aa11.59□□□□□ -0.55
R3HCC1-207ENST00000521588 ZNF22P17026 224 aaPredicted RBP11.58□□□□□ -0.56
R3HCC1-207ENST00000521588 NDUFA6P56556 154 aa11.58□□□□□ -0.56
R3HCC1-207ENST00000521588 PMCHL1Q16048 86 aa11.58□□□□□ -0.56
R3HCC1-207ENST00000521588 LINC00167Q96N53 147 aa11.58□□□□□ -0.56
R3HCC1-207ENST00000521588 IGLV5-37A0A075B6J1 123 aa11.57□□□□□ -0.56
R3HCC1-207ENST00000521588 NDUFA5Q16718 116 aa11.57□□□□□ -0.56
R3HCC1-207ENST00000521588 YPEL4Q96NS1 127 aa11.57□□□□□ -0.56
R3HCC1-207ENST00000521588 ATP5LO75964 103 aa11.56□□□□□ -0.56
R3HCC1-207ENST00000521588 BCE1O60756 84 aa11.54□□□□□ -0.56
R3HCC1-207ENST00000521588 BAGE3Q86Y29 109 aa11.54□□□□□ -0.56
R3HCC1-207ENST00000521588 C11orf86A6NJI1 115 aa11.53□□□□□ -0.56
R3HCC1-207ENST00000521588 RPL37AP8A6NKH3 93 aa11.53□□□□□ -0.56
R3HCC1-207ENST00000521588 LPAP08519 4548 aa11.52□□□□□ -0.56
R3HCC1-207ENST00000521588 RNF213Q63HN8 5207 aa11.52□□□□□ -0.57
R3HCC1-207ENST00000521588 GAGE10A6NGK3 116 aa11.51□□□□□ -0.57
R3HCC1-207ENST00000521588 PFN2P35080 140 aa11.51□□□□□ -0.57
R3HCC1-207ENST00000521588 RPL13AP40429 203 aaKnown RBP11.51□□□□□ -0.57
R3HCC1-207ENST00000521588 RPL28P46779 137 aaKnown RBP11.51□□□□□ -0.57
R3HCC1-207ENST00000521588 ERG28Q9UKR5 140 aa11.5□□□□□ -0.57
R3HCC1-207ENST00000521588 COX17Q14061 63 aa11.49□□□□□ -0.57
R3HCC1-207ENST00000521588 NKAPP1Q8N9T2 125 aa11.49□□□□□ -0.57
R3HCC1-207ENST00000521588 CHCHD1Q96BP2 118 aaKnown RBP11.49□□□□□ -0.57
R3HCC1-207ENST00000521588 TMEM170BQ5T4T1 132 aa11.48□□□□□ -0.57
R3HCC1-207ENST00000521588 SND1-IT1Q9HBX3 110 aa11.48□□□□□ -0.57
R3HCC1-207ENST00000521588 CHTOPQ9Y3Y2 248 aaKnown RBP11.48□□□□□ -0.57
R3HCC1-207ENST00000521588 SCO1O75880 301 aa11.47□□□□□ -0.57
R3HCC1-207ENST00000521588 KRTAP13-1Q8IUC0 172 aa11.47□□□□□ -0.57
R3HCC1-207ENST00000521588 ZNF625Q96I27 306 aaPredicted RBP11.47□□□□□ -0.57
R3HCC1-207ENST00000521588 TRAV12-1A0A0B4J245 112 aa11.46□□□□□ -0.57
R3HCC1-207ENST00000521588 VPREB1P12018 145 aa11.46□□□□□ -0.57
R3HCC1-207ENST00000521588 SFTA2Q6UW10 78 aa11.46□□□□□ -0.57
R3HCC1-207ENST00000521588 IFI27L1Q96BM0 104 aa11.44□□□□□ -0.58
R3HCC1-207ENST00000521588 TMEM223A0PJW6 202 aa11.43□□□□□ -0.58
R3HCC1-207ENST00000521588 IGKV2-28A0A075B6P5 120 aa11.42□□□□□ -0.58
R3HCC1-207ENST00000521588 A0A087X002 238 aa11.42□□□□□ -0.58
R3HCC1-207ENST00000521588 IGKV2D-28P01615 120 aa11.42□□□□□ -0.58
R3HCC1-207ENST00000521588 RPL24P83731 157 aaKnown RBP11.42□□□□□ -0.58
R3HCC1-207ENST00000521588 CBLN2Q8IUK8 224 aa11.42□□□□□ -0.58
R3HCC1-207ENST00000521588 Q8NDZ9 215 aa11.42□□□□□ -0.58
R3HCC1-207ENST00000521588 UBE2AP49459 152 aa11.4□□□□□ -0.58
R3HCC1-207ENST00000521588 CRYGAP11844 174 aa11.39□□□□□ -0.59
R3HCC1-207ENST00000521588 FAM19A2Q8N3H0 131 aa11.39□□□□□ -0.59
R3HCC1-207ENST00000521588 HSBP1O75506 76 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms