RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 PACRGQ96M98 296 aaPredicted RBP13.23□□□□□ -0.29
HOXA3-204ENST00000521401 TOMM7Q9P0U1 55 aa13.23□□□□□ -0.29
HOXA3-204ENST00000521401 PLA2G2DQ9UNK4 145 aa13.23□□□□□ -0.29
HOXA3-204ENST00000521401 PRSS2P07478 247 aa13.21□□□□□ -0.29
HOXA3-204ENST00000521401 C9orf129Q5T035 196 aaKnown RBP13.21□□□□□ -0.29
HOXA3-204ENST00000521401 FAM19A5Q7Z5A7 132 aaPredicted RBP13.21□□□□□ -0.29
HOXA3-204ENST00000521401 GEMIN7Q9H840 131 aaKnown RBP13.21□□□□□ -0.29
HOXA3-204ENST00000521401 C6orf226Q5I0X4 101 aa13.2□□□□□ -0.3
HOXA3-204ENST00000521401 LINC01549A6NIU2 74 aa13.19□□□□□ -0.3
HOXA3-204ENST00000521401 KRTAP10-8P60410 259 aa13.19□□□□□ -0.3
HOXA3-204ENST00000521401 C1orf137Q5JT78 98 aa13.19□□□□□ -0.3
HOXA3-204ENST00000521401 REG3GQ6UW15 175 aa13.19□□□□□ -0.3
HOXA3-204ENST00000521401 FA2HQ7L5A8 372 aa13.19□□□□□ -0.3
HOXA3-204ENST00000521401 IGLV5-45A0A087WSX0 123 aa13.18□□□□□ -0.3
HOXA3-204ENST00000521401 CKS1BP61024 79 aa13.18□□□□□ -0.3
HOXA3-204ENST00000521401 CST9LQ9H4G1 147 aa13.18□□□□□ -0.3
HOXA3-204ENST00000521401 TINCRA0A1B0GVN0 87 aa13.17□□□□□ -0.3
HOXA3-204ENST00000521401 SMIM1B2RUZ4 78 aa13.17□□□□□ -0.3
HOXA3-204ENST00000521401 LINC00469Q8N7U9 141 aa13.17□□□□□ -0.3
HOXA3-204ENST00000521401 URB1-AS1Q96HZ7 61 aa13.17□□□□□ -0.3
HOXA3-204ENST00000521401 SMCO4Q9NRQ5 59 aa13.16□□□□□ -0.3
HOXA3-204ENST00000521401 UBR4Q5T4S7 5183 aa13.16□□□□□ -0.3
HOXA3-204ENST00000521401 A0A096LNJ9 63 aa13.15□□□□□ -0.3
HOXA3-204ENST00000521401 M0QXV9 152 aa13.15□□□□□ -0.3
HOXA3-204ENST00000521401 APOC3P02656 99 aa13.15□□□□□ -0.3
HOXA3-204ENST00000521401 ODF1Q14990 250 aa13.15□□□□□ -0.3
HOXA3-204ENST00000521401 TRAPPC1Q9Y5R8 145 aa13.15□□□□□ -0.3
HOXA3-204ENST00000521401 IGLV7-43P04211 117 aa13.14□□□□□ -0.31
HOXA3-204ENST00000521401 PMVKQ15126 192 aa13.14□□□□□ -0.31
HOXA3-204ENST00000521401 F8VRH5 84 aa13.13□□□□□ -0.31
HOXA3-204ENST00000521401 PDZD11Q5EBL8 140 aa13.13□□□□□ -0.31
HOXA3-204ENST00000521401 C18orf32Q8TCD1 76 aa13.13□□□□□ -0.31
HOXA3-204ENST00000521401 CXCL5P42830 114 aa13.12□□□□□ -0.31
HOXA3-204ENST00000521401 XAGE1AQ9HD64 81 aa13.11□□□□□ -0.31
HOXA3-204ENST00000521401 SNAPINO95295 136 aa13.1□□□□□ -0.31
HOXA3-204ENST00000521401 LINC00614P0C842 121 aa13.1□□□□□ -0.31
HOXA3-204ENST00000521401 SVBPQ8N300 66 aa13.1□□□□□ -0.31
HOXA3-204ENST00000521401 COX7B2Q8TF08 81 aa13.1□□□□□ -0.31
HOXA3-204ENST00000521401 SPINK8P0C7L1 97 aa13.09□□□□□ -0.31
HOXA3-204ENST00000521401 UBE2BP63146 152 aa13.08□□□□□ -0.32
HOXA3-204ENST00000521401 YPEL4Q96NS1 127 aa13.08□□□□□ -0.32
HOXA3-204ENST00000521401 IGLC3P0DOY3 106 aa13.07□□□□□ -0.32
HOXA3-204ENST00000521401 NDUFA5Q16718 116 aa13.07□□□□□ -0.32
HOXA3-204ENST00000521401 C22orf24Q9Y442 160 aa13.07□□□□□ -0.32
HOXA3-204ENST00000521401 HBDP02042 147 aa13.06□□□□□ -0.32
HOXA3-204ENST00000521401 PMCHL1Q16048 86 aa13.06□□□□□ -0.32
HOXA3-204ENST00000521401 DIRC1Q969H9 104 aa13.06□□□□□ -0.32
HOXA3-204ENST00000521401 LRP2P98164 4655 aa13.06□□□□□ -0.32
HOXA3-204ENST00000521401 H0Y9J4 135 aa13.04□□□□□ -0.32
HOXA3-204ENST00000521401 IGLV5-39A0A0G2JS06 123 aa13.02□□□□□ -0.33
HOXA3-204ENST00000521401 H3BRM9 83 aa13.02□□□□□ -0.33
HOXA3-204ENST00000521401 ZNF22P17026 224 aaPredicted RBP13.02□□□□□ -0.33
HOXA3-204ENST00000521401 NDUFA6P56556 154 aa13.02□□□□□ -0.33
HOXA3-204ENST00000521401 RAB5BP61020 215 aa13.01□□□□□ -0.33
HOXA3-204ENST00000521401 TP73-AS1Q9UF72 201 aa13.01□□□□□ -0.33
HOXA3-204ENST00000521401 KRTAP1-4P0C5Y4 121 aa13□□□□□ -0.33
HOXA3-204ENST00000521401 LBHQ53QV2 105 aaPredicted RBP13□□□□□ -0.33
HOXA3-204ENST00000521401 ATP5LO75964 103 aa12.98□□□□□ -0.33
HOXA3-204ENST00000521401 MRPL55Q7Z7F7 128 aaKnown RBP12.98□□□□□ -0.33
HOXA3-204ENST00000521401 PRR26Q8N8Z3 221 aa12.98□□□□□ -0.33
HOXA3-204ENST00000521401 C11orf86A6NJI1 115 aa12.97□□□□□ -0.33
HOXA3-204ENST00000521401 BAGE3Q86Y29 109 aa12.97□□□□□ -0.33
HOXA3-204ENST00000521401 NUPR1O60356 82 aa12.96□□□□□ -0.33
HOXA3-204ENST00000521401 ZNF861PO60384 105 aa12.95□□□□□ -0.34
HOXA3-204ENST00000521401 LINC00167Q96N53 147 aa12.95□□□□□ -0.34
HOXA3-204ENST00000521401 IGLV5-37A0A075B6J1 123 aa12.94□□□□□ -0.34
HOXA3-204ENST00000521401 CBLN2Q8IUK8 224 aa12.94□□□□□ -0.34
HOXA3-204ENST00000521401 CHCHD1Q96BP2 118 aaKnown RBP12.94□□□□□ -0.34
HOXA3-204ENST00000521401 RPL37AP8A6NKH3 93 aa12.91□□□□□ -0.34
HOXA3-204ENST00000521401 PFN2P35080 140 aa12.91□□□□□ -0.34
HOXA3-204ENST00000521401 CHTOPQ9Y3Y2 248 aaKnown RBP12.91□□□□□ -0.34
HOXA3-204ENST00000521401 IGLV1-50A0A075B6I6 118 aa12.9□□□□□ -0.34
HOXA3-204ENST00000521401 TMEM170BQ5T4T1 132 aa12.9□□□□□ -0.34
HOXA3-204ENST00000521401 GAGE10A6NGK3 116 aa12.89□□□□□ -0.35
HOXA3-204ENST00000521401 BCE1O60756 84 aa12.89□□□□□ -0.35
HOXA3-204ENST00000521401 ERG28Q9UKR5 140 aa12.89□□□□□ -0.35
HOXA3-204ENST00000521401 TRAV12-1A0A0B4J245 112 aa12.88□□□□□ -0.35
HOXA3-204ENST00000521401 IFI27L1Q96BM0 104 aa12.88□□□□□ -0.35
HOXA3-204ENST00000521401 SCO1O75880 301 aa12.87□□□□□ -0.35
HOXA3-204ENST00000521401 ZNF625Q96I27 306 aaPredicted RBP12.87□□□□□ -0.35
HOXA3-204ENST00000521401 SND1-IT1Q9HBX3 110 aa12.87□□□□□ -0.35
HOXA3-204ENST00000521401 COX17Q14061 63 aa12.86□□□□□ -0.35
HOXA3-204ENST00000521401 TMEM223A0PJW6 202 aa12.85□□□□□ -0.35
HOXA3-204ENST00000521401 TRGC2P03986 189 aa12.85□□□□□ -0.35
HOXA3-204ENST00000521401 VPREB1P12018 145 aa12.85□□□□□ -0.35
HOXA3-204ENST00000521401 NKAPP1Q8N9T2 125 aa12.85□□□□□ -0.35
HOXA3-204ENST00000521401 LPAP08519 4548 aa12.84□□□□□ -0.35
HOXA3-204ENST00000521401 RPL28P46779 137 aaKnown RBP12.84□□□□□ -0.35
HOXA3-204ENST00000521401 SLC7A5P1Q8MH63 180 aa12.84□□□□□ -0.35
HOXA3-204ENST00000521401 FAM19A2Q8N3H0 131 aa12.84□□□□□ -0.35
HOXA3-204ENST00000521401 Q8NDZ9 215 aa12.84□□□□□ -0.35
HOXA3-204ENST00000521401 SFTA2Q6UW10 78 aa12.83□□□□□ -0.36
HOXA3-204ENST00000521401 KRTAP13-1Q8IUC0 172 aa12.83□□□□□ -0.36
HOXA3-204ENST00000521401 HSBP1O75506 76 aa12.82□□□□□ -0.36
HOXA3-204ENST00000521401 LINC00310P59036 64 aa12.82□□□□□ -0.36
HOXA3-204ENST00000521401 IGKV2-28A0A075B6P5 120 aa12.8□□□□□ -0.36
HOXA3-204ENST00000521401 IGKV2D-28P01615 120 aa12.8□□□□□ -0.36
HOXA3-204ENST00000521401 RPL13AP40429 203 aaKnown RBP12.8□□□□□ -0.36
HOXA3-204ENST00000521401 SERF1AO75920 110 aa12.77□□□□□ -0.37
HOXA3-204ENST00000521401 RPL24P83731 157 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms