RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 CRYBA4P53673 196 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 COTL1Q14019 142 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 RRN3P1Q2M238 152 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 RNASE13Q5GAN3 156 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 NTM-AS1Q6ZSK4 140 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 HIST1H4GQ99525 98 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 C1QTNF4Q9BXJ3 329 aa4.87□□□□□ -1.63
CTNNA1-227ENST00000521387 TRBV10-1A0A0K0K1A3 114 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 LOC100131303A0A0U1RQF7 123 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 GAGE12JA6NER3 117 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 H3BS24 57 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 K7ERJ3 54 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 UBE2D3P61077 147 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 UBE2D2P62837 147 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 MRPS36P82909 103 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 RPL36AP83881 106 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 GAGE4Q13068 117 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 GAGE5Q13069 117 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 GAGE13Q4V321 117 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 Q6ZUT4 128 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 SLC25A29Q8N8R3 303 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 OR5A1Q8NGJ0 315 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 RPL36ALQ969Q0 106 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 SPANXA1Q9NS26 97 aa4.86□□□□□ -1.63
CTNNA1-227ENST00000521387 IGHV3-64A0A075B6Q5 118 aa4.85□□□□□ -1.63
CTNNA1-227ENST00000521387 A0A0J9YY99 117 aa4.85□□□□□ -1.63
CTNNA1-227ENST00000521387 J3QQQ9 107 aa4.85□□□□□ -1.63
CTNNA1-227ENST00000521387 FHL2Q14192 279 aa4.85□□□□□ -1.63
CTNNA1-227ENST00000521387 UPK3BQ9BT76 320 aa4.85□□□□□ -1.63
CTNNA1-227ENST00000521387 TIMM21Q9BVV7 248 aa4.85□□□□□ -1.63
CTNNA1-227ENST00000521387 NHP2Q9NX24 153 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-227ENST00000521387 TRGV2A0A075B6R0 118 aa4.84□□□□□ -1.63
CTNNA1-227ENST00000521387 IGLV5-52A0A0A0MRZ9 124 aa4.84□□□□□ -1.63
CTNNA1-227ENST00000521387 A0A0U1RQV1 116 aa4.84□□□□□ -1.63
CTNNA1-227ENST00000521387 TINCRA0A1B0GVN0 87 aa4.84□□□□□ -1.63
CTNNA1-227ENST00000521387 A0A1B0GWB2 263 aa4.84□□□□□ -1.63
CTNNA1-227ENST00000521387 LINC00694P0DN24 101 aa4.84□□□□□ -1.63
CTNNA1-227ENST00000521387 LGALS3P17931 250 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-227ENST00000521387 UBE2D1P51668 147 aa4.84□□□□□ -1.63
CTNNA1-227ENST00000521387 SCGB1D4Q6XE38 83 aa4.84□□□□□ -1.63
CTNNA1-227ENST00000521387 TRAV8-3A0A0A6YYJ7 113 aa4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 TRGV4A0A0C4DH28 118 aa4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 A0A1W2PPM0 123 aa4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 GAGE10A6NGK3 116 aa4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 CIDEAO60543 219 aa4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 TIRAPP58753 221 aa4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 COX6A2Q02221 97 aa4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 SRSF9Q13242 221 aaKnown RBP eCLIP4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 ESRGQ1W209 222 aa4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 SCXQ7RTU7 201 aa4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 DAZ4Q86SG3 579 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 LINC00612Q8N6U2 182 aa4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 DAZ3Q9NR90 486 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 SPANXB1Q9NS25 103 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-227ENST00000521387 IGHV1-58A0A0C4DH39 117 aa4.82□□□□□ -1.64
CTNNA1-227ENST00000521387 TRBV6-4A0A1B0GX49 114 aa4.82□□□□□ -1.64
CTNNA1-227ENST00000521387 K7EP34 96 aa4.82□□□□□ -1.64
CTNNA1-227ENST00000521387 IGHV3-30P01768 117 aa4.82□□□□□ -1.64
CTNNA1-227ENST00000521387 SPINK8P0C7L1 97 aa4.82□□□□□ -1.64
CTNNA1-227ENST00000521387 IGHV3-30-3P0DP02 117 aa4.82□□□□□ -1.64
CTNNA1-227ENST00000521387 IGHV3-30-5P0DP03 117 aa4.82□□□□□ -1.64
CTNNA1-227ENST00000521387 DGAT2L7PQ6IED9 249 aa4.82□□□□□ -1.64
CTNNA1-227ENST00000521387 TMEM243Q9BU79 118 aa4.82□□□□□ -1.64
CTNNA1-227ENST00000521387 GTSF1LQ9H1H1 148 aa4.82□□□□□ -1.64
CTNNA1-227ENST00000521387 A0A0J9YXY3 114 aa4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 SMIM9A6NGZ8 99 aa4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 DEFB130BP0DP73 79 aa4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 DEFB130AP0DP74 79 aa4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 GTF2H5Q6ZYL4 71 aa4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 FAM19A3Q7Z5A8 133 aa4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 C10orf126Q8N4M7 172 aa4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 VSIG2Q96IQ7 327 aa4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 GEMIN7Q9H840 131 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 CDC42SE2Q9NRR3 84 aa4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 CDKN2A-AS1Q9UH64 79 aa4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 CSDC2Q9Y534 153 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 SPCS1Q9Y6A9 102 aa4.81□□□□□ -1.64
CTNNA1-227ENST00000521387 IGLV5-45A0A087WSX0 123 aa4.8□□□□□ -1.64
CTNNA1-227ENST00000521387 LRCOL1A6NCL2 159 aa4.8□□□□□ -1.64
CTNNA1-227ENST00000521387 CFC1BP0CG36 223 aa4.8□□□□□ -1.64
CTNNA1-227ENST00000521387 CFC1P0CG37 223 aa4.8□□□□□ -1.64
CTNNA1-227ENST00000521387 FABP2P12104 132 aa4.8□□□□□ -1.64
CTNNA1-227ENST00000521387 DAD1P61803 113 aa4.8□□□□□ -1.64
CTNNA1-227ENST00000521387 GAGE6Q13070 117 aa4.8□□□□□ -1.64
CTNNA1-227ENST00000521387 LINC00242Q5T6M2 205 aa4.8□□□□□ -1.64
CTNNA1-227ENST00000521387 TMEM101Q96IK0 257 aa4.8□□□□□ -1.64
CTNNA1-227ENST00000521387 TEX48A0A1B0GUV7 120 aa4.79□□□□□ -1.64
CTNNA1-227ENST00000521387 TMEM238LA0A1B0GVL6 79 aa4.79□□□□□ -1.64
CTNNA1-227ENST00000521387 H7C423 109 aa4.79□□□□□ -1.64
CTNNA1-227ENST00000521387 APOMO95445 188 aa4.79□□□□□ -1.64
CTNNA1-227ENST00000521387 SMAGPQ0VAQ4 97 aa4.79□□□□□ -1.64
CTNNA1-227ENST00000521387 MUSTN1Q8IVN3 82 aa4.79□□□□□ -1.64
CTNNA1-227ENST00000521387 LITAFQ99732 161 aa4.79□□□□□ -1.64
CTNNA1-227ENST00000521387 NDUFA12Q9UI09 145 aa4.79□□□□□ -1.64
CTNNA1-227ENST00000521387 IGLV4-60A0A075B6I1 120 aa4.78□□□□□ -1.64
CTNNA1-227ENST00000521387 TRAV13-1A0A0B4J241 112 aa4.78□□□□□ -1.64
CTNNA1-227ENST00000521387 F5H768 121 aa4.78□□□□□ -1.64
CTNNA1-227ENST00000521387 UBE2L6O14933 153 aa4.78□□□□□ -1.64
CTNNA1-227ENST00000521387 GYPEP15421 78 aa4.78□□□□□ -1.64
CTNNA1-227ENST00000521387 HERVK_113P63121 156 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms