RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 NUPR1O60356 82 aa12□□□□□ -0.49
PABPC1-217ENST00000521067 MT-ND4LP03901 98 aa12□□□□□ -0.49
PABPC1-217ENST00000521067 A0A087X002 238 aa11.99□□□□□ -0.49
PABPC1-217ENST00000521067 F8VRH5 84 aa11.99□□□□□ -0.49
PABPC1-217ENST00000521067 K7EMI3 77 aa11.99□□□□□ -0.49
PABPC1-217ENST00000521067 HERVK_113P63121 156 aa11.99□□□□□ -0.49
PABPC1-217ENST00000521067 PNRC1Q12796 327 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-217ENST00000521067 LBHQ53QV2 105 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-217ENST00000521067 TSPAN13O95857 204 aa11.98□□□□□ -0.49
PABPC1-217ENST00000521067 NXT2Q9NPJ8 142 aaKnown RBP11.98□□□□□ -0.49
PABPC1-217ENST00000521067 MRPL55Q7Z7F7 128 aaKnown RBP11.97□□□□□ -0.49
PABPC1-217ENST00000521067 TOMM6Q96B49 74 aa11.97□□□□□ -0.49
PABPC1-217ENST00000521067 TIMM17AQ99595 171 aa11.97□□□□□ -0.49
PABPC1-217ENST00000521067 TP73-AS1Q9UF72 201 aa11.97□□□□□ -0.49
PABPC1-217ENST00000521067 SEC11AP67812 179 aa11.96□□□□□ -0.49
PABPC1-217ENST00000521067 KIAA1644Q3SXP7 199 aa11.96□□□□□ -0.49
PABPC1-217ENST00000521067 GEMIN7Q9H840 131 aaKnown RBP11.96□□□□□ -0.49
PABPC1-217ENST00000521067 ADCYAP1P18509 176 aa11.95□□□□□ -0.5
PABPC1-217ENST00000521067 LINC00167Q96N53 147 aa11.95□□□□□ -0.5
PABPC1-217ENST00000521067 RPL37AP8A6NKH3 93 aa11.94□□□□□ -0.5
PABPC1-217ENST00000521067 SMIM1B2RUZ4 78 aa11.94□□□□□ -0.5
PABPC1-217ENST00000521067 BCE1O60756 84 aa11.94□□□□□ -0.5
PABPC1-217ENST00000521067 PAPPA-AS1Q5QFB9 102 aa11.94□□□□□ -0.5
PABPC1-217ENST00000521067 ANAPC11Q9NYG5 84 aa11.93□□□□□ -0.5
PABPC1-217ENST00000521067 ERASQ7Z444 233 aa11.92□□□□□ -0.5
PABPC1-217ENST00000521067 CXCL5P42830 114 aa11.91□□□□□ -0.5
PABPC1-217ENST00000521067 RPL28P46779 137 aaKnown RBP11.91□□□□□ -0.5
PABPC1-217ENST00000521067 SCGB3A1Q96QR1 104 aa11.91□□□□□ -0.5
PABPC1-217ENST00000521067 FAT4Q6V0I7 4981 aa11.9□□□□□ -0.5
PABPC1-217ENST00000521067 IGLV5-45A0A087WSX0 123 aa11.9□□□□□ -0.5
PABPC1-217ENST00000521067 GAGE10A6NGK3 116 aa11.9□□□□□ -0.5
PABPC1-217ENST00000521067 G0S2P27469 103 aa11.9□□□□□ -0.5
PABPC1-217ENST00000521067 PDZD11Q5EBL8 140 aa11.9□□□□□ -0.5
PABPC1-217ENST00000521067 COX7B2Q8TF08 81 aa11.9□□□□□ -0.5
PABPC1-217ENST00000521067 TINCRA0A1B0GVN0 87 aa11.89□□□□□ -0.51
PABPC1-217ENST00000521067 CRYGAP11844 174 aa11.88□□□□□ -0.51
PABPC1-217ENST00000521067 RAB5BP61020 215 aa11.88□□□□□ -0.51
PABPC1-217ENST00000521067 KRTAP13-1Q8IUC0 172 aa11.88□□□□□ -0.51
PABPC1-217ENST00000521067 TYMSOSQ8TAI1 123 aa11.88□□□□□ -0.51
PABPC1-217ENST00000521067 SPINK8P0C7L1 97 aa11.87□□□□□ -0.51
PABPC1-217ENST00000521067 KRTAP13-2Q52LG2 175 aa11.87□□□□□ -0.51
PABPC1-217ENST00000521067 CST9LQ9H4G1 147 aa11.87□□□□□ -0.51
PABPC1-217ENST00000521067 IGLV5-37A0A075B6J1 123 aa11.86□□□□□ -0.51
PABPC1-217ENST00000521067 LINC01546A6NGU7 62 aa11.86□□□□□ -0.51
PABPC1-217ENST00000521067 SCO1O75880 301 aa11.85□□□□□ -0.51
PABPC1-217ENST00000521067 MUC17Q685J3 4493 aa11.85□□□□□ -0.51
PABPC1-217ENST00000521067 RAB14P61106 215 aa11.84□□□□□ -0.51
PABPC1-217ENST00000521067 IGKV2-28A0A075B6P5 120 aa11.8□□□□□ -0.52
PABPC1-217ENST00000521067 IGKV2D-28P01615 120 aa11.8□□□□□ -0.52
PABPC1-217ENST00000521067 UBE2AP49459 152 aa11.8□□□□□ -0.52
PABPC1-217ENST00000521067 PMVKQ15126 192 aa11.8□□□□□ -0.52
PABPC1-217ENST00000521067 NKAPP1Q8N9T2 125 aa11.79□□□□□ -0.52
PABPC1-217ENST00000521067 RETNLBQ9BQ08 111 aa11.79□□□□□ -0.52
PABPC1-217ENST00000521067 GNB1LQ9BYB4 327 aa11.79□□□□□ -0.52
PABPC1-217ENST00000521067 TRAV9-1A0A075B6T8 112 aa11.78□□□□□ -0.52
PABPC1-217ENST00000521067 CLLU1Q5K131 121 aa11.78□□□□□ -0.52
PABPC1-217ENST00000521067 TMEM218A2RU14 115 aa11.77□□□□□ -0.53
PABPC1-217ENST00000521067 PFN2P35080 140 aa11.77□□□□□ -0.53
PABPC1-217ENST00000521067 MRPL18Q9H0U6 180 aaKnown RBP11.77□□□□□ -0.53
PABPC1-217ENST00000521067 IGLV5-39A0A0G2JS06 123 aa11.76□□□□□ -0.53
PABPC1-217ENST00000521067 LINC01549A6NIU2 74 aa11.76□□□□□ -0.53
PABPC1-217ENST00000521067 ATP5LO75964 103 aa11.76□□□□□ -0.53
PABPC1-217ENST00000521067 FAM229BQ4G0N7 80 aa11.76□□□□□ -0.53
PABPC1-217ENST00000521067 VPREB1P12018 145 aa11.75□□□□□ -0.53
PABPC1-217ENST00000521067 PRLHP81277 87 aa11.75□□□□□ -0.53
PABPC1-217ENST00000521067 Q8NDZ9 215 aa11.75□□□□□ -0.53
PABPC1-217ENST00000521067 TMEM238C9JI98 176 aa11.74□□□□□ -0.53
PABPC1-217ENST00000521067 H3BRM9 83 aa11.74□□□□□ -0.53
PABPC1-217ENST00000521067 IGLC3P0DOY3 106 aa11.74□□□□□ -0.53
PABPC1-217ENST00000521067 LCE2AQ5TA79 106 aaPredicted RBP11.74□□□□□ -0.53
PABPC1-217ENST00000521067 FA2HQ7L5A8 372 aa11.74□□□□□ -0.53
PABPC1-217ENST00000521067 LINC00304Q8N9R0 145 aa11.74□□□□□ -0.53
PABPC1-217ENST00000521067 SND1-IT1Q9HBX3 110 aa11.74□□□□□ -0.53
PABPC1-217ENST00000521067 A0A096LNJ9 63 aa11.73□□□□□ -0.53
PABPC1-217ENST00000521067 A0A0U1RQV1 116 aa11.73□□□□□ -0.53
PABPC1-217ENST00000521067 ZNF22P17026 224 aaPredicted RBP11.72□□□□□ -0.53
PABPC1-217ENST00000521067 TMEM126AQ9H061 195 aa11.72□□□□□ -0.53
PABPC1-217ENST00000521067 FABP9Q0Z7S8 132 aa11.71□□□□□ -0.53
PABPC1-217ENST00000521067 UQCC3Q6UW78 93 aa11.71□□□□□ -0.53
PABPC1-217ENST00000521067 URB1-AS1Q96HZ7 61 aa11.71□□□□□ -0.53
PABPC1-217ENST00000521067 KRTAP9-2Q9BYQ4 174 aa11.71□□□□□ -0.53
PABPC1-217ENST00000521067 ERG28Q9UKR5 140 aa11.71□□□□□ -0.53
PABPC1-217ENST00000521067 M0R378 163 aa11.7□□□□□ -0.54
PABPC1-217ENST00000521067 FAM19A1Q7Z5A9 133 aa11.7□□□□□ -0.54
PABPC1-217ENST00000521067 ZNF625Q96I27 306 aaPredicted RBP11.7□□□□□ -0.54
PABPC1-217ENST00000521067 SMCO4Q9NRQ5 59 aa11.7□□□□□ -0.54
PABPC1-217ENST00000521067 IGKV2D-26A0A0A0MRZ7 120 aa11.69□□□□□ -0.54
PABPC1-217ENST00000521067 S100PP25815 95 aa11.69□□□□□ -0.54
PABPC1-217ENST00000521067 NDUFA6P56556 154 aa11.69□□□□□ -0.54
PABPC1-217ENST00000521067 PLEKHB2Q96CS7 222 aa11.69□□□□□ -0.54
PABPC1-217ENST00000521067 SEC11CQ9BY50 192 aa11.68□□□□□ -0.54
PABPC1-217ENST00000521067 IFITM2Q01629 132 aa11.67□□□□□ -0.54
PABPC1-217ENST00000521067 C3orf22Q8N5N4 141 aa11.67□□□□□ -0.54
PABPC1-217ENST00000521067 IGLV7-46A0A075B6I9 117 aa11.66□□□□□ -0.54
PABPC1-217ENST00000521067 COX19Q49B96 90 aa11.66□□□□□ -0.54
PABPC1-217ENST00000521067 RPL24P83731 157 aaKnown RBP11.65□□□□□ -0.54
PABPC1-217ENST00000521067 COX17Q14061 63 aa11.65□□□□□ -0.54
PABPC1-217ENST00000521067 PMCHL1Q16048 86 aa11.65□□□□□ -0.54
PABPC1-217ENST00000521067 TPRXLQ17RH7 258 aa11.65□□□□□ -0.54
PABPC1-217ENST00000521067 C11orf86A6NJI1 115 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms