RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 ESRGQ1W209 222 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 DEFB114Q30KQ6 69 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 RNASE13Q5GAN3 156 aaKnown RBP2.39□□□□□ -2.03
CSMD3-209ENST00000519485 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.39□□□□□ -2.03
CSMD3-209ENST00000519485 Q6ZQT0 140 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 Q6ZR54 194 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 NTM-AS1Q6ZSK4 140 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 PRR15Q8IV56 129 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 C1orf158Q8N1D5 194 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 C6orf223Q8N319 242 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 DEFB124Q8NES8 71 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 TOMM7Q9P0U1 55 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 NACAE9PAV3 2078 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 TRGV1A0A0A0MS02 117 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 H3BUX3 64 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 DEFB131AP59861 70 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 NREPQ16612 68 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 LINC00575Q6W349 94 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 Q6ZVQ6 151 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.38□□□□□ -2.03
CSMD3-209ENST00000519485 TMEM254Q8TBM7 123 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 DEFB104AQ8WTQ1 72 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 C16orf74Q96GX8 76 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 PKIGQ9Y2B9 76 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 UTRNP46939 3433 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 CHD7Q9P2D1 2997 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 ARHGAP32A7KAX9 2087 aa2.38□□□□□ -2.03
CSMD3-209ENST00000519485 PLCE1Q9P212 2302 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 CADP27708 2225 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 SDK1Q7Z5N4 2213 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 ABCA1O95477 2261 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 TRGV2A0A075B6R0 118 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 TRBV6-8A0A0A6YYG3 113 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 IGHV3OR16-9A0A0B4J2B5 98 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 TRGV4A0A0C4DH28 118 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 IGHV3-38A0A0C4DH36 116 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 A0A0U1RQV1 116 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 B4DSR2 109 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 BPY2O14599 106 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 DAD1P61803 113 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 CD164Q04900 197 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 Q1T7F1 81 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 FAM19A1Q7Z5A9 133 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 C11orf72Q8NBR9 251 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 BPESC1Q9GZL8 116 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 AHCTF1Q8WYP5 2266 aa2.37□□□□□ -2.03
CSMD3-209ENST00000519485 WDR87Q6ZQQ6 2873 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 SVILO95425 2214 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 TRBV7-4A0A0J9YYF1 115 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 LINC00959A0A1B0GUT2 108 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 OXTP01178 125 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 MSMBP08118 114 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 COX7BP24311 80 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 DEFB1P60022 68 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 LY6EQ16553 131 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 Q6ZRU5 148 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 WFDC11Q8NEX6 87 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 DIRC1Q969H9 104 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 CYSTM1Q9H1C7 97 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 C16orf95Q9H693 158 aa2.36□□□□□ -2.03
CSMD3-209ENST00000519485 ICE1Q9Y2F5 2266 aa2.35□□□□□ -2.03
CSMD3-209ENST00000519485 NDUFS5O43920 106 aa2.35□□□□□ -2.03
CSMD3-209ENST00000519485 UBE2BP63146 152 aa2.35□□□□□ -2.03
CSMD3-209ENST00000519485 C6orf99Q4VX62 202 aa2.35□□□□□ -2.03
CSMD3-209ENST00000519485 CD164L2Q6UWJ8 174 aa2.35□□□□□ -2.03
CSMD3-209ENST00000519485 FP248Q71RG6 208 aaPredicted RBP2.35□□□□□ -2.03
CSMD3-209ENST00000519485 MRPL55Q7Z7F7 128 aaKnown RBP2.35□□□□□ -2.03
CSMD3-209ENST00000519485 C4orf3Q8WVX3 66 aa2.35□□□□□ -2.03
CSMD3-209ENST00000519485 RMI2Q96E14 147 aa2.35□□□□□ -2.03
CSMD3-209ENST00000519485 SNURFQ9Y675 71 aa2.35□□□□□ -2.03
CSMD3-209ENST00000519485 URB1O60287 2271 aaKnown RBP2.35□□□□□ -2.03
CSMD3-209ENST00000519485 CUL9Q8IWT3 2517 aa2.35□□□□□ -2.03
CSMD3-209ENST00000519485 C5orf42Q9H799 3197 aa2.34□□□□□ -2.03
CSMD3-209ENST00000519485 H3BPC8 53 aa2.34□□□□□ -2.03
CSMD3-209ENST00000519485 LY6HO94772 140 aa2.34□□□□□ -2.03
CSMD3-209ENST00000519485 ELOF1P60002 83 aaKnown RBP2.34□□□□□ -2.03
CSMD3-209ENST00000519485 BRD3OSQ6XYD6 125 aa2.34□□□□□ -2.03
CSMD3-209ENST00000519485 TYMSOSQ8TAI1 123 aa2.34□□□□□ -2.03
CSMD3-209ENST00000519485 LIMD2Q9BT23 127 aa2.34□□□□□ -2.03
CSMD3-209ENST00000519485 OCR1Q9BZK8 76 aa2.34□□□□□ -2.03
CSMD3-209ENST00000519485 CYP4F30PQ9H0H9 118 aa2.34□□□□□ -2.03
CSMD3-209ENST00000519485 PRO3102Q9H379 93 aa2.34□□□□□ -2.03
CSMD3-209ENST00000519485 GVQW2A0A096LPI5 108 aaPredicted RBP2.33□□□□□ -2.04
CSMD3-209ENST00000519485 TRAV10A0A0B4J240 114 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 hDV103S1A0JD37 113 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 IGLV6-57P01721 117 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 UBE2AP49459 152 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 MP68P56378 58 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 C9orf129Q5T035 196 aaKnown RBP2.33□□□□□ -2.04
CSMD3-209ENST00000519485 REG3GQ6UW15 175 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 Q6ZQY7 126 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 WFDC9Q8NEX5 89 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 CCL19Q99731 98 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 ESM1Q9NQ30 184 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 BRCA2P51587 3418 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 ABCA4P78363 2273 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 WNK2Q9Y3S1 2297 aa2.33□□□□□ -2.04
CSMD3-209ENST00000519485 IGKV3OR2-268A0A0C4DH90 116 aa2.32□□□□□ -2.04
CSMD3-209ENST00000519485 ETDCA0A1B0GVM5 59 aa2.32□□□□□ -2.04
CSMD3-209ENST00000519485 M0R378 163 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms