RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 FAM19A5Q7Z5A7 132 aaPredicted RBP12.96□□□□□ -0.33
ARFGEF1-206ENST00000519436 Q8IZM0 81 aa12.96□□□□□ -0.33
ARFGEF1-206ENST00000519436 C6orf226Q5I0X4 101 aa12.95□□□□□ -0.34
ARFGEF1-206ENST00000519436 SCGB3A1Q96QR1 104 aa12.95□□□□□ -0.34
ARFGEF1-206ENST00000519436 IGLV7-43P04211 117 aa12.94□□□□□ -0.34
ARFGEF1-206ENST00000519436 TOMM7Q9P0U1 55 aa12.94□□□□□ -0.34
ARFGEF1-206ENST00000519436 PRSS2P07478 247 aa12.93□□□□□ -0.34
ARFGEF1-206ENST00000519436 CKS1BP61024 79 aa12.93□□□□□ -0.34
ARFGEF1-206ENST00000519436 COX19Q49B96 90 aa12.93□□□□□ -0.34
ARFGEF1-206ENST00000519436 GEMIN7Q9H840 131 aaKnown RBP12.93□□□□□ -0.34
ARFGEF1-206ENST00000519436 CARHSP1Q9Y2V2 147 aaKnown RBP12.93□□□□□ -0.34
ARFGEF1-206ENST00000519436 LRP2P98164 4655 aa12.91□□□□□ -0.34
ARFGEF1-206ENST00000519436 IGLV5-45A0A087WSX0 123 aa12.91□□□□□ -0.34
ARFGEF1-206ENST00000519436 M0QXV9 152 aa12.91□□□□□ -0.34
ARFGEF1-206ENST00000519436 MRPL18Q9H0U6 180 aaKnown RBP12.91□□□□□ -0.34
ARFGEF1-206ENST00000519436 TINCRA0A1B0GVN0 87 aa12.9□□□□□ -0.34
ARFGEF1-206ENST00000519436 LINC01549A6NIU2 74 aa12.9□□□□□ -0.34
ARFGEF1-206ENST00000519436 RHEBQ15382 184 aa12.9□□□□□ -0.34
ARFGEF1-206ENST00000519436 CST9LQ9H4G1 147 aa12.9□□□□□ -0.34
ARFGEF1-206ENST00000519436 SMIM1B2RUZ4 78 aa12.89□□□□□ -0.35
ARFGEF1-206ENST00000519436 FABP9Q0Z7S8 132 aa12.89□□□□□ -0.35
ARFGEF1-206ENST00000519436 RPS10P5Q9NQ39 176 aa12.89□□□□□ -0.35
ARFGEF1-206ENST00000519436 LINC00469Q8N7U9 141 aa12.88□□□□□ -0.35
ARFGEF1-206ENST00000519436 F8VRH5 84 aa12.87□□□□□ -0.35
ARFGEF1-206ENST00000519436 PDZD11Q5EBL8 140 aa12.87□□□□□ -0.35
ARFGEF1-206ENST00000519436 DIRC1Q969H9 104 aa12.87□□□□□ -0.35
ARFGEF1-206ENST00000519436 FA2HQ7L5A8 372 aa12.86□□□□□ -0.35
ARFGEF1-206ENST00000519436 XAGE1AQ9HD64 81 aa12.86□□□□□ -0.35
ARFGEF1-206ENST00000519436 CXCL5P42830 114 aa12.85□□□□□ -0.35
ARFGEF1-206ENST00000519436 UBE2BP63146 152 aa12.85□□□□□ -0.35
ARFGEF1-206ENST00000519436 H0Y9J4 135 aa12.84□□□□□ -0.35
ARFGEF1-206ENST00000519436 PMVKQ15126 192 aa12.84□□□□□ -0.35
ARFGEF1-206ENST00000519436 URB1-AS1Q96HZ7 61 aa12.84□□□□□ -0.35
ARFGEF1-206ENST00000519436 C22orf24Q9Y442 160 aa12.84□□□□□ -0.35
ARFGEF1-206ENST00000519436 A0A096LNJ9 63 aa12.83□□□□□ -0.36
ARFGEF1-206ENST00000519436 COX7B2Q8TF08 81 aa12.83□□□□□ -0.36
ARFGEF1-206ENST00000519436 SMCO4Q9NRQ5 59 aa12.82□□□□□ -0.36
ARFGEF1-206ENST00000519436 KRTAP1-4P0C5Y4 121 aa12.81□□□□□ -0.36
ARFGEF1-206ENST00000519436 SPINK8P0C7L1 97 aa12.8□□□□□ -0.36
ARFGEF1-206ENST00000519436 PRR26Q8N8Z3 221 aa12.8□□□□□ -0.36
ARFGEF1-206ENST00000519436 C18orf32Q8TCD1 76 aa12.8□□□□□ -0.36
ARFGEF1-206ENST00000519436 TRAPPC1Q9Y5R8 145 aa12.79□□□□□ -0.36
ARFGEF1-206ENST00000519436 LINC00614P0C842 121 aa12.78□□□□□ -0.36
ARFGEF1-206ENST00000519436 LBHQ53QV2 105 aaPredicted RBP12.78□□□□□ -0.36
ARFGEF1-206ENST00000519436 TP73-AS1Q9UF72 201 aa12.78□□□□□ -0.36
ARFGEF1-206ENST00000519436 IGLC3P0DOY3 106 aa12.77□□□□□ -0.37
ARFGEF1-206ENST00000519436 APOC3P02656 99 aa12.76□□□□□ -0.37
ARFGEF1-206ENST00000519436 IGLV5-39A0A0G2JS06 123 aa12.75□□□□□ -0.37
ARFGEF1-206ENST00000519436 ZNF861PO60384 105 aa12.75□□□□□ -0.37
ARFGEF1-206ENST00000519436 H3BRM9 83 aa12.74□□□□□ -0.37
ARFGEF1-206ENST00000519436 NUPR1O60356 82 aa12.74□□□□□ -0.37
ARFGEF1-206ENST00000519436 MRPL55Q7Z7F7 128 aaKnown RBP12.74□□□□□ -0.37
ARFGEF1-206ENST00000519436 IGLV1-50A0A075B6I6 118 aa12.73□□□□□ -0.37
ARFGEF1-206ENST00000519436 HBDP02042 147 aa12.73□□□□□ -0.37
ARFGEF1-206ENST00000519436 SNAPINO95295 136 aa12.72□□□□□ -0.37
ARFGEF1-206ENST00000519436 ZNF22P17026 224 aaPredicted RBP12.72□□□□□ -0.37
ARFGEF1-206ENST00000519436 RAB5BP61020 215 aa12.72□□□□□ -0.37
ARFGEF1-206ENST00000519436 PMCHL1Q16048 86 aa12.72□□□□□ -0.37
ARFGEF1-206ENST00000519436 SVBPQ8N300 66 aa12.72□□□□□ -0.37
ARFGEF1-206ENST00000519436 YPEL4Q96NS1 127 aa12.72□□□□□ -0.37
ARFGEF1-206ENST00000519436 LINC00167Q96N53 147 aa12.71□□□□□ -0.37
ARFGEF1-206ENST00000519436 IGLV5-37A0A075B6J1 123 aa12.7□□□□□ -0.38
ARFGEF1-206ENST00000519436 NDUFA6P56556 154 aa12.7□□□□□ -0.38
ARFGEF1-206ENST00000519436 ATP5LO75964 103 aa12.68□□□□□ -0.38
ARFGEF1-206ENST00000519436 BCE1O60756 84 aa12.67□□□□□ -0.38
ARFGEF1-206ENST00000519436 NDUFA5Q16718 116 aa12.67□□□□□ -0.38
ARFGEF1-206ENST00000519436 LPAP08519 4548 aa12.66□□□□□ -0.38
ARFGEF1-206ENST00000519436 C11orf86A6NJI1 115 aa12.66□□□□□ -0.38
ARFGEF1-206ENST00000519436 RPL37AP8A6NKH3 93 aa12.66□□□□□ -0.38
ARFGEF1-206ENST00000519436 BAGE3Q86Y29 109 aa12.66□□□□□ -0.38
ARFGEF1-206ENST00000519436 GAGE10A6NGK3 116 aa12.64□□□□□ -0.39
ARFGEF1-206ENST00000519436 PFN2P35080 140 aa12.64□□□□□ -0.39
ARFGEF1-206ENST00000519436 RPL13AP40429 203 aaKnown RBP12.62□□□□□ -0.39
ARFGEF1-206ENST00000519436 RPL28P46779 137 aaKnown RBP12.62□□□□□ -0.39
ARFGEF1-206ENST00000519436 SND1-IT1Q9HBX3 110 aa12.62□□□□□ -0.39
ARFGEF1-206ENST00000519436 ERG28Q9UKR5 140 aa12.62□□□□□ -0.39
ARFGEF1-206ENST00000519436 KRTAP13-1Q8IUC0 172 aa12.61□□□□□ -0.39
ARFGEF1-206ENST00000519436 CHCHD1Q96BP2 118 aaKnown RBP12.61□□□□□ -0.39
ARFGEF1-206ENST00000519436 RNF213Q63HN8 5207 aa12.61□□□□□ -0.39
ARFGEF1-206ENST00000519436 SCO1O75880 301 aa12.6□□□□□ -0.39
ARFGEF1-206ENST00000519436 COX17Q14061 63 aa12.6□□□□□ -0.39
ARFGEF1-206ENST00000519436 TMEM170BQ5T4T1 132 aa12.6□□□□□ -0.39
ARFGEF1-206ENST00000519436 ZNF625Q96I27 306 aaPredicted RBP12.6□□□□□ -0.39
ARFGEF1-206ENST00000519436 VPREB1P12018 145 aa12.59□□□□□ -0.39
ARFGEF1-206ENST00000519436 NKAPP1Q8N9T2 125 aa12.59□□□□□ -0.39
ARFGEF1-206ENST00000519436 CHTOPQ9Y3Y2 248 aaKnown RBP12.59□□□□□ -0.39
ARFGEF1-206ENST00000519436 TRAV12-1A0A0B4J245 112 aa12.57□□□□□ -0.4
ARFGEF1-206ENST00000519436 Q8NDZ9 215 aa12.57□□□□□ -0.4
ARFGEF1-206ENST00000519436 A0A087X002 238 aa12.56□□□□□ -0.4
ARFGEF1-206ENST00000519436 SFTA2Q6UW10 78 aa12.56□□□□□ -0.4
ARFGEF1-206ENST00000519436 IFI27L1Q96BM0 104 aa12.56□□□□□ -0.4
ARFGEF1-206ENST00000519436 IGKV2-28A0A075B6P5 120 aa12.55□□□□□ -0.4
ARFGEF1-206ENST00000519436 TMEM223A0PJW6 202 aa12.55□□□□□ -0.4
ARFGEF1-206ENST00000519436 IGKV2D-28P01615 120 aa12.55□□□□□ -0.4
ARFGEF1-206ENST00000519436 CBLN2Q8IUK8 224 aa12.54□□□□□ -0.4
ARFGEF1-206ENST00000519436 RPL24P83731 157 aaKnown RBP12.52□□□□□ -0.41
ARFGEF1-206ENST00000519436 UBE2AP49459 152 aa12.51□□□□□ -0.41
ARFGEF1-206ENST00000519436 FAM19A2Q8N3H0 131 aa12.51□□□□□ -0.41
ARFGEF1-206ENST00000519436 ANAPC11Q9NYG5 84 aa12.51□□□□□ -0.41
ARFGEF1-206ENST00000519436 CRYGAP11844 174 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms