RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 ZFHX3Q15911 3703 aa-1.25□□□□□ -2.61
RNU6-1028P-201ENST00000517164 NUP188Q5SRE5 1749 aa-1.25□□□□□ -2.61
RNU6-1028P-201ENST00000517164 PCNX1Q96RV3 2341 aa-1.25□□□□□ -2.61
RNU6-1028P-201ENST00000517164 DIP2CQ9Y2E4 1556 aa-1.25□□□□□ -2.61
RNU6-1028P-201ENST00000517164 HERC2O95714 4834 aa-1.26□□□□□ -2.61
RNU6-1028P-201ENST00000517164 A0A0G2JMZ2 1700 aa-1.26□□□□□ -2.61
RNU6-1028P-201ENST00000517164 XRN1Q8IZH2 1706 aaKnown RBP-1.26□□□□□ -2.61
RNU6-1028P-201ENST00000517164 A0A1B0GV90 55 aa-1.26□□□□□ -2.61
RNU6-1028P-201ENST00000517164 NAP1L6A6NFF2 107 aa-1.26□□□□□ -2.61
RNU6-1028P-201ENST00000517164 SVBPQ8N300 66 aa-1.26□□□□□ -2.61
RNU6-1028P-201ENST00000517164 FAT1Q14517 4588 aa-1.26□□□□□ -2.61
RNU6-1028P-201ENST00000517164 TOP2BQ02880 1626 aa-1.26□□□□□ -2.61
RNU6-1028P-201ENST00000517164 CPSF4LA6NMK7 179 aaKnown RBP-1.27□□□□□ -2.61
RNU6-1028P-201ENST00000517164 DLEU1O43261 78 aa-1.27□□□□□ -2.61
RNU6-1028P-201ENST00000517164 C12orf57Q99622 126 aa-1.27□□□□□ -2.61
RNU6-1028P-201ENST00000517164 SEC11AP67812 179 aa-1.28□□□□□ -2.61
RNU6-1028P-201ENST00000517164 KRTAP20-2Q3LI61 65 aa-1.28□□□□□ -2.61
RNU6-1028P-201ENST00000517164 RYR3Q15413 4870 aa-1.28□□□□□ -2.61
RNU6-1028P-201ENST00000517164 PLEKHH2Q8IVE3 1493 aa-1.29□□□□□ -2.62
RNU6-1028P-201ENST00000517164 NLRP1Q9C000 1473 aa-1.29□□□□□ -2.62
RNU6-1028P-201ENST00000517164 GNG4P50150 75 aa-1.29□□□□□ -2.62
RNU6-1028P-201ENST00000517164 PPP3R1P63098 170 aa-1.29□□□□□ -2.62
RNU6-1028P-201ENST00000517164 SVEP1Q4LDE5 3571 aa-1.29□□□□□ -2.62
RNU6-1028P-201ENST00000517164 MRC2Q9UBG0 1479 aa-1.3□□□□□ -2.62
RNU6-1028P-201ENST00000517164 SAA2P0DJI9 122 aaPredicted RBP-1.3□□□□□ -2.62
RNU6-1028P-201ENST00000517164 PRKDCP78527 4128 aaKnown RBP-1.31□□□□□ -2.62
RNU6-1028P-201ENST00000517164 CORTO00230 105 aa-1.31□□□□□ -2.62
RNU6-1028P-201ENST00000517164 LINC00846Q9NV44 126 aa-1.31□□□□□ -2.62
RNU6-1028P-201ENST00000517164 CRYM-AS1A6NIL9 109 aa-1.32□□□□□ -2.62
RNU6-1028P-201ENST00000517164 PAPPA2Q9BXP8 1791 aa-1.32□□□□□ -2.62
RNU6-1028P-201ENST00000517164 NRKQ7Z2Y5 1582 aa-1.33□□□□□ -2.62
RNU6-1028P-201ENST00000517164 EFCAB10A6NFE3 127 aa-1.33□□□□□ -2.62
RNU6-1028P-201ENST00000517164 SNCAP37840 140 aa-1.33□□□□□ -2.62
RNU6-1028P-201ENST00000517164 CRIPTQ9P021 101 aa-1.33□□□□□ -2.62
RNU6-1028P-201ENST00000517164 MARF1Q9Y4F3 1742 aaKnown RBP-1.33□□□□□ -2.62
RNU6-1028P-201ENST00000517164 SETD2Q9BYW2 2564 aaPredicted RBP-1.33□□□□□ -2.62
RNU6-1028P-201ENST00000517164 PDCD11Q14690 1871 aaKnown RBP-1.33□□□□□ -2.62
RNU6-1028P-201ENST00000517164 ARHGAP5Q13017 1502 aa-1.34□□□□□ -2.62
RNU6-1028P-201ENST00000517164 A0A1B0GU69 56 aa-1.34□□□□□ -2.62
RNU6-1028P-201ENST00000517164 S100A1P23297 94 aa-1.34□□□□□ -2.62
RNU6-1028P-201ENST00000517164 KRTAP6-2Q3LI66 62 aa-1.34□□□□□ -2.62
RNU6-1028P-201ENST00000517164 A0A087WVE0 104 aa-1.35□□□□□ -2.63
RNU6-1028P-201ENST00000517164 KRTAP19-8Q3LI54 63 aa-1.35□□□□□ -2.63
RNU6-1028P-201ENST00000517164 H3BQ15 152 aa-1.36□□□□□ -2.63
RNU6-1028P-201ENST00000517164 SPRR2AP35326 72 aa-1.36□□□□□ -2.63
RNU6-1028P-201ENST00000517164 DEFB135Q30KP9 77 aa-1.36□□□□□ -2.63
RNU6-1028P-201ENST00000517164 CC2D2AQ9P2K1 1620 aa-1.37□□□□□ -2.63
RNU6-1028P-201ENST00000517164 SPHKAPQ2M3C7 1700 aa-1.37□□□□□ -2.63
RNU6-1028P-201ENST00000517164 NF1P21359 2839 aa-1.37□□□□□ -2.63
RNU6-1028P-201ENST00000517164 H1FX-AS1Q4G0G2 97 aa-1.37□□□□□ -2.63
RNU6-1028P-201ENST00000517164 COL4A6Q14031 1691 aa-1.37□□□□□ -2.63
RNU6-1028P-201ENST00000517164 HYDINQ4G0P3 5121 aa-1.37□□□□□ -2.63
RNU6-1028P-201ENST00000517164 MT4P47944 62 aa-1.38□□□□□ -2.63
RNU6-1028P-201ENST00000517164 PZPP20742 1482 aa-1.38□□□□□ -2.63
RNU6-1028P-201ENST00000517164 NKTRP30414 1462 aaKnown RBP-1.38□□□□□ -2.63
RNU6-1028P-201ENST00000517164 MAPKBP1O60336 1514 aa-1.39□□□□□ -2.63
RNU6-1028P-201ENST00000517164 CHD1O14646 1710 aa-1.39□□□□□ -2.63
RNU6-1028P-201ENST00000517164 KRTDAPP60985 99 aa-1.39□□□□□ -2.63
RNU6-1028P-201ENST00000517164 GNG8Q9UK08 70 aa-1.39□□□□□ -2.63
RNU6-1028P-201ENST00000517164 CCDC141Q6ZP82 1450 aa-1.39□□□□□ -2.63
RNU6-1028P-201ENST00000517164 FLGP20930 4061 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1028P-201ENST00000517164 hADV29S1A0JD25 119 aa-1.4□□□□□ -2.63
RNU6-1028P-201ENST00000517164 C7orf77A4D0Y5 90 aa-1.4□□□□□ -2.63
RNU6-1028P-201ENST00000517164 HSD52Q0P140 79 aa-1.4□□□□□ -2.63
RNU6-1028P-201ENST00000517164 C6orf201Q7Z4U5 140 aa-1.4□□□□□ -2.63
RNU6-1028P-201ENST00000517164 CGREF1Q99674 301 aa-1.4□□□□□ -2.63
RNU6-1028P-201ENST00000517164 EIF4G3O43432 1585 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1028P-201ENST00000517164 TGP01266 2768 aa-1.41□□□□□ -2.63
RNU6-1028P-201ENST00000517164 RYR1P21817 5038 aa-1.41□□□□□ -2.63
RNU6-1028P-201ENST00000517164 USH2AO75445 5202 aa-1.41□□□□□ -2.64
RNU6-1028P-201ENST00000517164 ANKRD36A6QL64 1941 aa-1.41□□□□□ -2.64
RNU6-1028P-201ENST00000517164 LAMA5O15230 3695 aa-1.42□□□□□ -2.64
RNU6-1028P-201ENST00000517164 I3L3M4 83 aa-1.42□□□□□ -2.64
RNU6-1028P-201ENST00000517164 TMEM262E9PQX1 116 aa-1.43□□□□□ -2.64
RNU6-1028P-201ENST00000517164 C2orf88Q9BSF0 95 aa-1.43□□□□□ -2.64
RNU6-1028P-201ENST00000517164 VAMP8Q9BV40 100 aa-1.43□□□□□ -2.64
RNU6-1028P-201ENST00000517164 UBR4Q5T4S7 5183 aa-1.44□□□□□ -2.64
RNU6-1028P-201ENST00000517164 KNDC1Q76NI1 1749 aa-1.44□□□□□ -2.64
RNU6-1028P-201ENST00000517164 PKHD1P08F94 4074 aa-1.44□□□□□ -2.64
RNU6-1028P-201ENST00000517164 TOPAZ1Q8N9V7 1692 aa-1.45□□□□□ -2.64
RNU6-1028P-201ENST00000517164 EDC4Q6P2E9 1401 aaKnown RBP-1.45□□□□□ -2.64
RNU6-1028P-201ENST00000517164 DEFB107AQ8IZN7 70 aa-1.45□□□□□ -2.64
RNU6-1028P-201ENST00000517164 H3BQF6 201 aa-1.46□□□□□ -2.64
RNU6-1028P-201ENST00000517164 ASIPP42127 132 aa-1.46□□□□□ -2.64
RNU6-1028P-201ENST00000517164 TMEM203Q969S6 136 aa-1.46□□□□□ -2.64
RNU6-1028P-201ENST00000517164 ABCA3Q99758 1704 aa-1.46□□□□□ -2.64
RNU6-1028P-201ENST00000517164 HIVEP1P15822 2718 aa-1.47□□□□□ -2.64
RNU6-1028P-201ENST00000517164 LINC00587B1AMM8 73 aa-1.47□□□□□ -2.64
RNU6-1028P-201ENST00000517164 SPRR2EP22531 72 aa-1.47□□□□□ -2.64
RNU6-1028P-201ENST00000517164 MRPS10P82664 201 aaKnown RBP-1.47□□□□□ -2.64
RNU6-1028P-201ENST00000517164 GTF2H5Q6ZYL4 71 aa-1.47□□□□□ -2.64
RNU6-1028P-201ENST00000517164 SLIT1O75093 1534 aa-1.47□□□□□ -2.64
RNU6-1028P-201ENST00000517164 A0A0G2JND7 137 aa-1.48□□□□□ -2.65
RNU6-1028P-201ENST00000517164 H0Y9P7 68 aa-1.48□□□□□ -2.65
RNU6-1028P-201ENST00000517164 C9orf62Q8N4C0 152 aa-1.48□□□□□ -2.65
RNU6-1028P-201ENST00000517164 CACFD1Q9UGQ2 172 aa-1.48□□□□□ -2.65
RNU6-1028P-201ENST00000517164 KIAA1109Q2LD37 5005 aa-1.48□□□□□ -2.65
RNU6-1028P-201ENST00000517164 ABCC5O15440 1437 aa-1.49□□□□□ -2.65
RNU6-1028P-201ENST00000517164 TARBP1Q13395 1621 aaKnown RBP-1.49□□□□□ -2.65
RNU6-1028P-201ENST00000517164 GNGT1P63211 74 aa-1.5□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms