RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 BIVM-ERCC5R4GMW8 1640 aa0.45□□□□□ -2.34
SCARNA15.2-201ENST00000516409 MON2Q7Z3U7 1717 aa0.44□□□□□ -2.34
SCARNA15.2-201ENST00000516409 TULP4Q9NRJ4 1543 aa0.44□□□□□ -2.34
SCARNA15.2-201ENST00000516409 DNAJC13O75165 2243 aa0.44□□□□□ -2.34
SCARNA15.2-201ENST00000516409 ATP10BO94823 1461 aa0.44□□□□□ -2.34
SCARNA15.2-201ENST00000516409 C2CD3Q4AC94 2353 aa0.44□□□□□ -2.34
SCARNA15.2-201ENST00000516409 K7EP34 96 aa0.44□□□□□ -2.34
SCARNA15.2-201ENST00000516409 WFDC2Q14508 124 aa0.44□□□□□ -2.34
SCARNA15.2-201ENST00000516409 HMGN3Q15651 99 aa0.44□□□□□ -2.34
SCARNA15.2-201ENST00000516409 TENM3Q9P273 2699 aa0.44□□□□□ -2.34
SCARNA15.2-201ENST00000516409 ABCC2Q92887 1545 aa0.43□□□□□ -2.34
SCARNA15.2-201ENST00000516409 CHD9Q3L8U1 2897 aa0.43□□□□□ -2.34
SCARNA15.2-201ENST00000516409 CLTCQ00610 1675 aaKnown RBP0.43□□□□□ -2.34
SCARNA15.2-201ENST00000516409 PVALEFA0A1B0GWK0 134 aa0.43□□□□□ -2.34
SCARNA15.2-201ENST00000516409 PEA15Q15121 130 aa0.43□□□□□ -2.34
SCARNA15.2-201ENST00000516409 DEFB123Q8N688 67 aa0.43□□□□□ -2.34
SCARNA15.2-201ENST00000516409 S100A16Q96FQ6 103 aaKnown RBP0.43□□□□□ -2.34
SCARNA15.2-201ENST00000516409 XRN1Q8IZH2 1706 aaKnown RBP0.43□□□□□ -2.34
SCARNA15.2-201ENST00000516409 EPRSP07814 1512 aaKnown RBP0.43□□□□□ -2.34
SCARNA15.2-201ENST00000516409 CYB5AP00167 134 aa0.42□□□□□ -2.34
SCARNA15.2-201ENST00000516409 SMIM11AP58511 58 aa0.42□□□□□ -2.34
SCARNA15.2-201ENST00000516409 USP24Q9UPU5 2620 aa0.42□□□□□ -2.34
SCARNA15.2-201ENST00000516409 LRP1Q07954 4544 aaKnown RBP0.42□□□□□ -2.34
SCARNA15.2-201ENST00000516409 FANCAO15360 1455 aa0.41□□□□□ -2.34
SCARNA15.2-201ENST00000516409 USF3Q68DE3 2245 aa0.41□□□□□ -2.34
SCARNA15.2-201ENST00000516409 ZNF292O60281 2723 aa0.41□□□□□ -2.34
SCARNA15.2-201ENST00000516409 K7EQZ3 153 aa0.41□□□□□ -2.34
SCARNA15.2-201ENST00000516409 ALKAL2Q6UX46 152 aa0.41□□□□□ -2.34
SCARNA15.2-201ENST00000516409 NHSL1Q5SYE7 1610 aa0.41□□□□□ -2.34
SCARNA15.2-201ENST00000516409 SETBP1Q9Y6X0 1596 aa0.4□□□□□ -2.34
SCARNA15.2-201ENST00000516409 HMGN2P05204 90 aaKnown RBP0.4□□□□□ -2.35
SCARNA15.2-201ENST00000516409 COX6B1P14854 86 aa0.4□□□□□ -2.35
SCARNA15.2-201ENST00000516409 SPRR1AP35321 89 aa0.4□□□□□ -2.35
SCARNA15.2-201ENST00000516409 CRIPTQ9P021 101 aa0.4□□□□□ -2.35
SCARNA15.2-201ENST00000516409 CSMD3Q7Z407 3707 aa0.4□□□□□ -2.35
SCARNA15.2-201ENST00000516409 PAPPA2Q9BXP8 1791 aa0.4□□□□□ -2.35
SCARNA15.2-201ENST00000516409 CEP162Q5TB80 1403 aa0.39□□□□□ -2.35
SCARNA15.2-201ENST00000516409 TARBP1Q13395 1621 aaKnown RBP0.39□□□□□ -2.35
SCARNA15.2-201ENST00000516409 FAT4Q6V0I7 4981 aa0.39□□□□□ -2.35
SCARNA15.2-201ENST00000516409 IGLC2P0DOY2 106 aa0.39□□□□□ -2.35
SCARNA15.2-201ENST00000516409 IGLC3P0DOY3 106 aa0.39□□□□□ -2.35
SCARNA15.2-201ENST00000516409 SPRR1BP22528 89 aa0.39□□□□□ -2.35
SCARNA15.2-201ENST00000516409 DEFB109BQ30KR1 87 aa0.39□□□□□ -2.35
SCARNA15.2-201ENST00000516409 Q5VSD8 79 aa0.39□□□□□ -2.35
SCARNA15.2-201ENST00000516409 PLIN4Q96Q06 1357 aa0.39□□□□□ -2.35
SCARNA15.2-201ENST00000516409 ANKRD17O75179 2603 aaKnown RBP0.39□□□□□ -2.35
SCARNA15.2-201ENST00000516409 A0A0G2JMZ2 1700 aa0.38□□□□□ -2.35
SCARNA15.2-201ENST00000516409 KIAA1551Q9HCM1 1747 aa0.38□□□□□ -2.35
SCARNA15.2-201ENST00000516409 OTOGQ6ZRI0 2925 aa0.38□□□□□ -2.35
SCARNA15.2-201ENST00000516409 TDRG1Q3Y452 100 aa0.38□□□□□ -2.35
SCARNA15.2-201ENST00000516409 UBE2D4Q9Y2X8 147 aa0.38□□□□□ -2.35
SCARNA15.2-201ENST00000516409 U3KQA8 63 aa0.38□□□□□ -2.35
SCARNA15.2-201ENST00000516409 ZFYVE26Q68DK2 2539 aa0.38□□□□□ -2.35
SCARNA15.2-201ENST00000516409 SLIT1O75093 1534 aa0.38□□□□□ -2.35
SCARNA15.2-201ENST00000516409 NEXMIFQ5QGS0 1516 aa0.38□□□□□ -2.35
SCARNA15.2-201ENST00000516409 IGF2RP11717 2491 aa0.38□□□□□ -2.35
SCARNA15.2-201ENST00000516409 IQCF6A8MYZ5 107 aa0.37□□□□□ -2.35
SCARNA15.2-201ENST00000516409 NMSQ5H8A3 153 aa0.37□□□□□ -2.35
SCARNA15.2-201ENST00000516409 USMG5Q96IX5 58 aa0.37□□□□□ -2.35
SCARNA15.2-201ENST00000516409 AHNAK2Q8IVF2 5795 aa0.37□□□□□ -2.35
SCARNA15.2-201ENST00000516409 NAV2Q8IVL1 2488 aa0.37□□□□□ -2.35
SCARNA15.2-201ENST00000516409 SHPRHQ149N8 1683 aa0.37□□□□□ -2.35
SCARNA15.2-201ENST00000516409 DOPEY2Q9Y3R5 2298 aa0.36□□□□□ -2.35
SCARNA15.2-201ENST00000516409 IQSEC2Q5JU85 1478 aa0.36□□□□□ -2.35
SCARNA15.2-201ENST00000516409 PTPRQQ9UMZ3 2332 aa0.36□□□□□ -2.35
SCARNA15.2-201ENST00000516409 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
SCARNA15.2-201ENST00000516409 ABCC3O15438 1527 aa0.36□□□□□ -2.35
SCARNA15.2-201ENST00000516409 CUX1P39880 1505 aa0.36□□□□□ -2.35
SCARNA15.2-201ENST00000516409 PPRC1Q5VV67 1664 aaKnown RBP0.36□□□□□ -2.35
SCARNA15.2-201ENST00000516409 MYH4Q9Y623 1939 aa0.36□□□□□ -2.35
SCARNA15.2-201ENST00000516409 RGPD4Q7Z3J3 1758 aa0.35□□□□□ -2.35
SCARNA15.2-201ENST00000516409 PTPRZ1P23471 2315 aaPredicted RBP0.35□□□□□ -2.35
SCARNA15.2-201ENST00000516409 C5P01031 1676 aa0.35□□□□□ -2.35
SCARNA15.2-201ENST00000516409 SNRPFP62306 86 aaKnown RBP0.35□□□□□ -2.35
SCARNA15.2-201ENST00000516409 DEFB112Q30KQ8 113 aa0.35□□□□□ -2.35
SCARNA15.2-201ENST00000516409 FXYD6Q9H0Q3 95 aa0.35□□□□□ -2.35
SCARNA15.2-201ENST00000516409 SAMD9Q5K651 1589 aa0.35□□□□□ -2.35
SCARNA15.2-201ENST00000516409 AKAP6Q13023 2319 aa0.35□□□□□ -2.35
SCARNA15.2-201ENST00000516409 MYO3AQ8NEV4 1616 aa0.35□□□□□ -2.35
SCARNA15.2-201ENST00000516409 MYMXA0A1B0GTQ4 84 aa0.34□□□□□ -2.36
SCARNA15.2-201ENST00000516409 COX8AP10176 69 aa0.34□□□□□ -2.36
SCARNA15.2-201ENST00000516409 PLGLAQ15195 96 aa0.34□□□□□ -2.36
SCARNA15.2-201ENST00000516409 RABAC1Q9UI14 185 aa0.34□□□□□ -2.36
SCARNA15.2-201ENST00000516409 KIAA0556O60303 1618 aa0.34□□□□□ -2.36
SCARNA15.2-201ENST00000516409 PIEZO2Q9H5I5 2752 aa0.34□□□□□ -2.36
SCARNA15.2-201ENST00000516409 UBR1Q8IWV7 1749 aa0.33□□□□□ -2.36
SCARNA15.2-201ENST00000516409 RB1CC1Q8TDY2 1594 aa0.33□□□□□ -2.36
SCARNA15.2-201ENST00000516409 URB1O60287 2271 aaKnown RBP0.33□□□□□ -2.36
SCARNA15.2-201ENST00000516409 RGPD3A6NKT7 1758 aaPredicted RBP0.33□□□□□ -2.36
SCARNA15.2-201ENST00000516409 CPSF4LA6NMK7 179 aaKnown RBP0.33□□□□□ -2.36
SCARNA15.2-201ENST00000516409 LINC00643Q86TS7 51 aa0.33□□□□□ -2.36
SCARNA15.2-201ENST00000516409 CRYBG1Q9Y4K1 1723 aa0.33□□□□□ -2.36
SCARNA15.2-201ENST00000516409 PKDREJQ9NTG1 2253 aa0.33□□□□□ -2.36
SCARNA15.2-201ENST00000516409 SPTBN1Q01082 2364 aaKnown RBP0.32□□□□□ -2.36
SCARNA15.2-201ENST00000516409 A0A1B0GUT8 65 aa0.32□□□□□ -2.36
SCARNA15.2-201ENST00000516409 I3L3M4 83 aa0.32□□□□□ -2.36
SCARNA15.2-201ENST00000516409 KLK9Q2XQG4 91 aa0.32□□□□□ -2.36
SCARNA15.2-201ENST00000516409 APLNQ9ULZ1 77 aa0.32□□□□□ -2.36
SCARNA15.2-201ENST00000516409 ANKRD36A6QL64 1941 aa0.32□□□□□ -2.36
SCARNA15.2-201ENST00000516409 UNC79Q9P2D8 2635 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms