RNA–Protein interactions for RNA: ENST00000515478.1

CENPE-207, Transcript of centromere protein E, humanhuman

TSL 5

Gene CENPE, Length 291 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-207ENST00000515478 C12orf57Q99622 126 aa-1.08□□□□□ -2.58
CENPE-207ENST00000515478 SCN7AQ01118 1682 aa-1.09□□□□□ -2.58
CENPE-207ENST00000515478 DIP2CQ9Y2E4 1556 aa-1.09□□□□□ -2.58
CENPE-207ENST00000515478 NALCNQ8IZF0 1738 aa-1.09□□□□□ -2.58
CENPE-207ENST00000515478 TCHHQ07283 1943 aa-1.1□□□□□ -2.59
CENPE-207ENST00000515478 A0A1B0GV90 55 aa-1.1□□□□□ -2.59
CENPE-207ENST00000515478 CPSF4LA6NMK7 179 aaKnown RBP-1.1□□□□□ -2.59
CENPE-207ENST00000515478 DLEU1O43261 78 aa-1.1□□□□□ -2.59
CENPE-207ENST00000515478 MT4P47944 62 aa-1.1□□□□□ -2.59
CENPE-207ENST00000515478 GNG4P50150 75 aa-1.1□□□□□ -2.59
CENPE-207ENST00000515478 SEC11AP67812 179 aa-1.1□□□□□ -2.59
CENPE-207ENST00000515478 CREBBPQ92793 2442 aa-1.1□□□□□ -2.59
CENPE-207ENST00000515478 SAA2P0DJI9 122 aaPredicted RBP-1.11□□□□□ -2.59
CENPE-207ENST00000515478 PPP3R1P63098 170 aa-1.11□□□□□ -2.59
CENPE-207ENST00000515478 A0A0G2JMZ2 1700 aa-1.12□□□□□ -2.59
CENPE-207ENST00000515478 LINC00846Q9NV44 126 aa-1.12□□□□□ -2.59
CENPE-207ENST00000515478 PKHD1P08F94 4074 aa-1.12□□□□□ -2.59
CENPE-207ENST00000515478 TOP2BQ02880 1626 aa-1.12□□□□□ -2.59
CENPE-207ENST00000515478 XRN1Q8IZH2 1706 aaKnown RBP-1.12□□□□□ -2.59
CENPE-207ENST00000515478 PLEKHH2Q8IVE3 1493 aa-1.12□□□□□ -2.59
CENPE-207ENST00000515478 NLRP1Q9C000 1473 aa-1.12□□□□□ -2.59
CENPE-207ENST00000515478 NBEAL1Q6ZS30 2694 aa-1.12□□□□□ -2.59
CENPE-207ENST00000515478 URB1O60287 2271 aaKnown RBP-1.13□□□□□ -2.59
CENPE-207ENST00000515478 HYDINQ4G0P3 5121 aa-1.13□□□□□ -2.59
CENPE-207ENST00000515478 EFCAB10A6NFE3 127 aa-1.13□□□□□ -2.59
CENPE-207ENST00000515478 CRYM-AS1A6NIL9 109 aa-1.13□□□□□ -2.59
CENPE-207ENST00000515478 FMN2Q9NZ56 1722 aa-1.13□□□□□ -2.59
CENPE-207ENST00000515478 MRC2Q9UBG0 1479 aa-1.13□□□□□ -2.59
CENPE-207ENST00000515478 RYR1P21817 5038 aa-1.13□□□□□ -2.59
CENPE-207ENST00000515478 NF1P21359 2839 aa-1.14□□□□□ -2.59
CENPE-207ENST00000515478 FLGP20930 4061 aaPredicted RBP-1.14□□□□□ -2.59
CENPE-207ENST00000515478 CORTO00230 105 aa-1.14□□□□□ -2.59
CENPE-207ENST00000515478 STARD9Q9P2P6 4700 aa-1.15□□□□□ -2.59
CENPE-207ENST00000515478 SNCAP37840 140 aa-1.15□□□□□ -2.59
CENPE-207ENST00000515478 CNOT1A5YKK6 2376 aaKnown RBP-1.15□□□□□ -2.59
CENPE-207ENST00000515478 USH2AO75445 5202 aa-1.15□□□□□ -2.59
CENPE-207ENST00000515478 DOPEY1Q5JWR5 2465 aa-1.16□□□□□ -2.59
CENPE-207ENST00000515478 H3BQ15 152 aa-1.16□□□□□ -2.6
CENPE-207ENST00000515478 S100A1P23297 94 aa-1.16□□□□□ -2.6
CENPE-207ENST00000515478 ARHGAP5Q13017 1502 aa-1.16□□□□□ -2.6
CENPE-207ENST00000515478 NUP188Q5SRE5 1749 aa-1.17□□□□□ -2.6
CENPE-207ENST00000515478 DNAJC13O75165 2243 aa-1.17□□□□□ -2.6
CENPE-207ENST00000515478 A0A087WVE0 104 aa-1.17□□□□□ -2.6
CENPE-207ENST00000515478 A0A1B0GU69 56 aa-1.17□□□□□ -2.6
CENPE-207ENST00000515478 SPRR2AP35326 72 aa-1.17□□□□□ -2.6
CENPE-207ENST00000515478 DEFB135Q30KP9 77 aa-1.17□□□□□ -2.6
CENPE-207ENST00000515478 CRIPTQ9P021 101 aa-1.17□□□□□ -2.6
CENPE-207ENST00000515478 NRKQ7Z2Y5 1582 aa-1.17□□□□□ -2.6
CENPE-207ENST00000515478 CCDC141Q6ZP82 1450 aa-1.18□□□□□ -2.6
CENPE-207ENST00000515478 KRTDAPP60985 99 aa-1.18□□□□□ -2.6
CENPE-207ENST00000515478 KRTAP6-2Q3LI66 62 aa-1.18□□□□□ -2.6
CENPE-207ENST00000515478 SVEP1Q4LDE5 3571 aa-1.18□□□□□ -2.6
CENPE-207ENST00000515478 STAB2Q8WWQ8 2551 aa-1.19□□□□□ -2.6
CENPE-207ENST00000515478 H1FX-AS1Q4G0G2 97 aa-1.19□□□□□ -2.6
CENPE-207ENST00000515478 C6orf201Q7Z4U5 140 aa-1.2□□□□□ -2.6
CENPE-207ENST00000515478 CGREF1Q99674 301 aa-1.2□□□□□ -2.6
CENPE-207ENST00000515478 GNG8Q9UK08 70 aa-1.2□□□□□ -2.6
CENPE-207ENST00000515478 PZPP20742 1482 aa-1.2□□□□□ -2.6
CENPE-207ENST00000515478 NKTRP30414 1462 aaKnown RBP-1.2□□□□□ -2.6
CENPE-207ENST00000515478 KIAA1109Q2LD37 5005 aa-1.2□□□□□ -2.6
CENPE-207ENST00000515478 MAPKBP1O60336 1514 aa-1.2□□□□□ -2.6
CENPE-207ENST00000515478 C7orf77A4D0Y5 90 aa-1.21□□□□□ -2.6
CENPE-207ENST00000515478 UBR4Q5T4S7 5183 aa-1.22□□□□□ -2.6
CENPE-207ENST00000515478 hADV29S1A0JD25 119 aa-1.22□□□□□ -2.6
CENPE-207ENST00000515478 TMEM262E9PQX1 116 aa-1.22□□□□□ -2.6
CENPE-207ENST00000515478 I3L3M4 83 aa-1.22□□□□□ -2.6
CENPE-207ENST00000515478 HSD52Q0P140 79 aa-1.22□□□□□ -2.6
CENPE-207ENST00000515478 VAMP8Q9BV40 100 aa-1.22□□□□□ -2.6
CENPE-207ENST00000515478 EIF4G3O43432 1585 aaKnown RBP-1.22□□□□□ -2.61
CENPE-207ENST00000515478 PCNX1Q96RV3 2341 aa-1.22□□□□□ -2.61
CENPE-207ENST00000515478 CC2D2AQ9P2K1 1620 aa-1.23□□□□□ -2.61
CENPE-207ENST00000515478 SPHKAPQ2M3C7 1700 aa-1.23□□□□□ -2.61
CENPE-207ENST00000515478 MARF1Q9Y4F3 1742 aaKnown RBP-1.23□□□□□ -2.61
CENPE-207ENST00000515478 PAPPA2Q9BXP8 1791 aa-1.24□□□□□ -2.61
CENPE-207ENST00000515478 H3BQF6 201 aa-1.24□□□□□ -2.61
CENPE-207ENST00000515478 C2orf88Q9BSF0 95 aa-1.24□□□□□ -2.61
CENPE-207ENST00000515478 SETD2Q9BYW2 2564 aaPredicted RBP-1.24□□□□□ -2.61
CENPE-207ENST00000515478 EDC4Q6P2E9 1401 aaKnown RBP-1.24□□□□□ -2.61
CENPE-207ENST00000515478 HIVEP1P15822 2718 aa-1.25□□□□□ -2.61
CENPE-207ENST00000515478 TMEM203Q969S6 136 aa-1.25□□□□□ -2.61
CENPE-207ENST00000515478 COL4A6Q14031 1691 aa-1.26□□□□□ -2.61
CENPE-207ENST00000515478 MRPS10P82664 201 aaKnown RBP-1.26□□□□□ -2.61
CENPE-207ENST00000515478 GTF2H5Q6ZYL4 71 aa-1.26□□□□□ -2.61
CENPE-207ENST00000515478 DEFB107AQ8IZN7 70 aa-1.26□□□□□ -2.61
CENPE-207ENST00000515478 A0A0G2JND7 137 aa-1.27□□□□□ -2.61
CENPE-207ENST00000515478 H0Y9P7 68 aa-1.27□□□□□ -2.61
CENPE-207ENST00000515478 ASIPP42127 132 aa-1.27□□□□□ -2.61
CENPE-207ENST00000515478 EPPK1P58107 5090 aaKnown RBP-1.27□□□□□ -2.61
CENPE-207ENST00000515478 SPRR2EP22531 72 aa-1.28□□□□□ -2.61
CENPE-207ENST00000515478 GNGT1P63211 74 aa-1.28□□□□□ -2.61
CENPE-207ENST00000515478 C9orf62Q8N4C0 152 aa-1.28□□□□□ -2.61
CENPE-207ENST00000515478 CACFD1Q9UGQ2 172 aa-1.28□□□□□ -2.61
CENPE-207ENST00000515478 SLIT1O75093 1534 aa-1.29□□□□□ -2.62
CENPE-207ENST00000515478 LINC00587B1AMM8 73 aa-1.29□□□□□ -2.62
CENPE-207ENST00000515478 BIRC6Q9NR09 4857 aa-1.29□□□□□ -2.62
CENPE-207ENST00000515478 CHD1O14646 1710 aa-1.29□□□□□ -2.62
CENPE-207ENST00000515478 ABCC5O15440 1437 aa-1.3□□□□□ -2.62
CENPE-207ENST00000515478 PSMG4Q5JS54 123 aa-1.3□□□□□ -2.62
CENPE-207ENST00000515478 TOPAZ1Q8N9V7 1692 aa-1.3□□□□□ -2.62
CENPE-207ENST00000515478 TGP01266 2768 aa-1.31□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms