RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 LINC01546A6NGU7 62 aa15.13■□□□□ 0.01
SNF8-213ENST00000514929 NDUFC2-KCTD14E9PQ53 114 aa15.12■□□□□ 0.01
SNF8-213ENST00000514929 SRSF9Q13242 221 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNF8-213ENST00000514929 REG3GQ6UW15 175 aa15.12■□□□□ 0.01
SNF8-213ENST00000514929 FAM19A5Q7Z5A7 132 aaPredicted RBP15.12■□□□□ 0.01
SNF8-213ENST00000514929 Q8IZM0 81 aa15.12■□□□□ 0.01
SNF8-213ENST00000514929 LINC01600Q96MT4 127 aa15.11■□□□□ 0.01
SNF8-213ENST00000514929 LINC00469Q8N7U9 141 aa15.1■□□□□ 0.01
SNF8-213ENST00000514929 PLA2G2DQ9UNK4 145 aa15.1■□□□□ 0.01
SNF8-213ENST00000514929 APOC3P02656 99 aa15.09■□□□□ 0.01
SNF8-213ENST00000514929 C1orf137Q5JT78 98 aa15.09■□□□□ 0.01
SNF8-213ENST00000514929 NDUFA5Q16718 116 aa15.08■□□□□ 0
SNF8-213ENST00000514929 TRAPPC1Q9Y5R8 145 aa15.08■□□□□ 0
SNF8-213ENST00000514929 TINCRA0A1B0GVN0 87 aa15.07■□□□□ 0
SNF8-213ENST00000514929 CST9LQ9H4G1 147 aa15.07■□□□□ 0
SNF8-213ENST00000514929 HMCN2Q8NDA2 5059 aa15.05■□□□□ 0
SNF8-213ENST00000514929 M0QXV9 152 aa15.05■□□□□ -0
SNF8-213ENST00000514929 SNAPINO95295 136 aa15.05■□□□□ -0
SNF8-213ENST00000514929 PMVKQ15126 192 aa15.05■□□□□ -0
SNF8-213ENST00000514929 F8VRH5 84 aa15.04■□□□□ -0
SNF8-213ENST00000514929 C9orf129Q5T035 196 aaKnown RBP15.04■□□□□ -0
SNF8-213ENST00000514929 SVBPQ8N300 66 aa15.04■□□□□ -0
SNF8-213ENST00000514929 SMIM1B2RUZ4 78 aa15.03■□□□□ -0
SNF8-213ENST00000514929 KRTAP7-1Q8IUC3 87 aa15.03■□□□□ -0
SNF8-213ENST00000514929 CXCL5P42830 114 aa15.02■□□□□ -0
SNF8-213ENST00000514929 PDZD11Q5EBL8 140 aa15.02■□□□□ -0
SNF8-213ENST00000514929 C18orf32Q8TCD1 76 aa15.02■□□□□ -0
SNF8-213ENST00000514929 IGLV5-45A0A087WSX0 123 aa15.01□□□□□ -0.01
SNF8-213ENST00000514929 UBE2BP63146 152 aa15.01□□□□□ -0.01
SNF8-213ENST00000514929 LINC00614P0C842 121 aa15□□□□□ -0.01
SNF8-213ENST00000514929 KRTAP11-1Q8IUC1 163 aa15□□□□□ -0.01
SNF8-213ENST00000514929 COX7B2Q8TF08 81 aa15□□□□□ -0.01
SNF8-213ENST00000514929 IGLV7-43P04211 117 aa14.99□□□□□ -0.01
SNF8-213ENST00000514929 SPINK8P0C7L1 97 aa14.98□□□□□ -0.01
SNF8-213ENST00000514929 NDUFA6P56556 154 aa14.98□□□□□ -0.01
SNF8-213ENST00000514929 URB1-AS1Q96HZ7 61 aa14.98□□□□□ -0.01
SNF8-213ENST00000514929 XAGE1AQ9HD64 81 aa14.98□□□□□ -0.01
SNF8-213ENST00000514929 TNXBP22105 4242 aa14.98□□□□□ -0.01
SNF8-213ENST00000514929 A0A096LNJ9 63 aa14.97□□□□□ -0.01
SNF8-213ENST00000514929 H3BRM9 83 aa14.96□□□□□ -0.01
SNF8-213ENST00000514929 HBDP02042 147 aa14.96□□□□□ -0.01
SNF8-213ENST00000514929 KRTAP10-8P60410 259 aa14.96□□□□□ -0.01
SNF8-213ENST00000514929 RAB5BP61020 215 aa14.95□□□□□ -0.02
SNF8-213ENST00000514929 DIRC1Q969H9 104 aa14.95□□□□□ -0.02
SNF8-213ENST00000514929 PMCHL1Q16048 86 aa14.94□□□□□ -0.02
SNF8-213ENST00000514929 IGLC3P0DOY3 106 aa14.92□□□□□ -0.02
SNF8-213ENST00000514929 C22orf24Q9Y442 160 aa14.92□□□□□ -0.02
SNF8-213ENST00000514929 ATP5LO75964 103 aa14.9□□□□□ -0.02
SNF8-213ENST00000514929 ODF1Q14990 250 aa14.9□□□□□ -0.02
SNF8-213ENST00000514929 LBHQ53QV2 105 aaPredicted RBP14.9□□□□□ -0.02
SNF8-213ENST00000514929 H0Y9J4 135 aa14.88□□□□□ -0.03
SNF8-213ENST00000514929 YPEL4Q96NS1 127 aa14.88□□□□□ -0.03
SNF8-213ENST00000514929 ZNF22P17026 224 aaPredicted RBP14.87□□□□□ -0.03
SNF8-213ENST00000514929 BAGE3Q86Y29 109 aa14.86□□□□□ -0.03
SNF8-213ENST00000514929 IGLV5-39A0A0G2JS06 123 aa14.85□□□□□ -0.03
SNF8-213ENST00000514929 MRPL55Q7Z7F7 128 aaKnown RBP14.85□□□□□ -0.03
SNF8-213ENST00000514929 TP73-AS1Q9UF72 201 aa14.85□□□□□ -0.03
SNF8-213ENST00000514929 NUPR1O60356 82 aa14.82□□□□□ -0.04
SNF8-213ENST00000514929 TMEM170BQ5T4T1 132 aa14.82□□□□□ -0.04
SNF8-213ENST00000514929 CHCHD1Q96BP2 118 aaKnown RBP14.82□□□□□ -0.04
SNF8-213ENST00000514929 C11orf86A6NJI1 115 aa14.81□□□□□ -0.04
SNF8-213ENST00000514929 CBLN2Q8IUK8 224 aa14.81□□□□□ -0.04
SNF8-213ENST00000514929 PFN2P35080 140 aa14.8□□□□□ -0.04
SNF8-213ENST00000514929 PRR26Q8N8Z3 221 aa14.8□□□□□ -0.04
SNF8-213ENST00000514929 CHTOPQ9Y3Y2 248 aaKnown RBP14.79□□□□□ -0.04
SNF8-213ENST00000514929 ZNF861PO60384 105 aa14.78□□□□□ -0.04
SNF8-213ENST00000514929 NKAPP1Q8N9T2 125 aa14.77□□□□□ -0.05
SNF8-213ENST00000514929 LINC00167Q96N53 147 aa14.77□□□□□ -0.05
SNF8-213ENST00000514929 GAGE10A6NGK3 116 aa14.76□□□□□ -0.05
SNF8-213ENST00000514929 RPL37AP8A6NKH3 93 aa14.76□□□□□ -0.05
SNF8-213ENST00000514929 IFI27L1Q96BM0 104 aa14.76□□□□□ -0.05
SNF8-213ENST00000514929 ERG28Q9UKR5 140 aa14.76□□□□□ -0.05
SNF8-213ENST00000514929 UBR4Q5T4S7 5183 aa14.76□□□□□ -0.05
SNF8-213ENST00000514929 IGLV5-37A0A075B6J1 123 aa14.75□□□□□ -0.05
SNF8-213ENST00000514929 ZNF625Q96I27 306 aaPredicted RBP14.75□□□□□ -0.05
SNF8-213ENST00000514929 HSBP1O75506 76 aa14.74□□□□□ -0.05
SNF8-213ENST00000514929 KRTAP1-4P0C5Y4 121 aa14.74□□□□□ -0.05
SNF8-213ENST00000514929 SFTA2Q6UW10 78 aa14.74□□□□□ -0.05
SNF8-213ENST00000514929 IGLV1-50A0A075B6I6 118 aa14.73□□□□□ -0.05
SNF8-213ENST00000514929 TRAV12-1A0A0B4J245 112 aa14.73□□□□□ -0.05
SNF8-213ENST00000514929 BCE1O60756 84 aa14.73□□□□□ -0.05
SNF8-213ENST00000514929 COX17Q14061 63 aa14.72□□□□□ -0.05
SNF8-213ENST00000514929 RPL28P46779 137 aaKnown RBP14.71□□□□□ -0.05
SNF8-213ENST00000514929 FAM19A2Q8N3H0 131 aa14.71□□□□□ -0.05
SNF8-213ENST00000514929 SND1-IT1Q9HBX3 110 aa14.71□□□□□ -0.05
SNF8-213ENST00000514929 TRGC2P03986 189 aa14.7□□□□□ -0.06
SNF8-213ENST00000514929 SLC7A5P1Q8MH63 180 aa14.7□□□□□ -0.06
SNF8-213ENST00000514929 TMEM223A0PJW6 202 aa14.68□□□□□ -0.06
SNF8-213ENST00000514929 SCO1O75880 301 aa14.67□□□□□ -0.06
SNF8-213ENST00000514929 RPL13AP40429 203 aaKnown RBP14.66□□□□□ -0.06
SNF8-213ENST00000514929 RPL24P83731 157 aaKnown RBP14.66□□□□□ -0.06
SNF8-213ENST00000514929 IGKV2-28A0A075B6P5 120 aa14.65□□□□□ -0.06
SNF8-213ENST00000514929 IGKV2D-28P01615 120 aa14.65□□□□□ -0.06
SNF8-213ENST00000514929 VPREB1P12018 145 aa14.65□□□□□ -0.06
SNF8-213ENST00000514929 LINC00158P58513 81 aa14.64□□□□□ -0.07
SNF8-213ENST00000514929 H0Y8G0 127 aa14.63□□□□□ -0.07
SNF8-213ENST00000514929 UBE2AP49459 152 aa14.63□□□□□ -0.07
SNF8-213ENST00000514929 SERF1AO75920 110 aa14.62□□□□□ -0.07
SNF8-213ENST00000514929 LEPROTL1O95214 131 aa14.62□□□□□ -0.07
SNF8-213ENST00000514929 A0A0U1RRA0 63 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms