RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 CARHSP1Q9Y2V2 147 aaKnown RBP14.35□□□□□ -0.11
CCND3-221ENST00000514588 HERVK_113P63121 156 aa14.34□□□□□ -0.11
CCND3-221ENST00000514588 F8VRH5 84 aa14.33□□□□□ -0.12
CCND3-221ENST00000514588 NUPR1O60356 82 aa14.33□□□□□ -0.12
CCND3-221ENST00000514588 SEC11AP67812 179 aa14.33□□□□□ -0.12
CCND3-221ENST00000514588 LBHQ53QV2 105 aaPredicted RBP14.33□□□□□ -0.12
CCND3-221ENST00000514588 PAPPA-AS1Q5QFB9 102 aa14.32□□□□□ -0.12
CCND3-221ENST00000514588 CTDSP1Q9GZU7 261 aa14.32□□□□□ -0.12
CCND3-221ENST00000514588 GEMIN7Q9H840 131 aaKnown RBP14.32□□□□□ -0.12
CCND3-221ENST00000514588 PRR4Q16378 134 aa14.31□□□□□ -0.12
CCND3-221ENST00000514588 TIMM17AQ99595 171 aa14.31□□□□□ -0.12
CCND3-221ENST00000514588 TOMM6Q96B49 74 aa14.3□□□□□ -0.12
CCND3-221ENST00000514588 G0S2P27469 103 aa14.29□□□□□ -0.12
CCND3-221ENST00000514588 TP73-AS1Q9UF72 201 aa14.29□□□□□ -0.12
CCND3-221ENST00000514588 MRPL55Q7Z7F7 128 aaKnown RBP14.28□□□□□ -0.12
CCND3-221ENST00000514588 CXCL5P42830 114 aa14.26□□□□□ -0.13
CCND3-221ENST00000514588 KIAA1644Q3SXP7 199 aa14.26□□□□□ -0.13
CCND3-221ENST00000514588 SMIM1B2RUZ4 78 aa14.25□□□□□ -0.13
CCND3-221ENST00000514588 ERASQ7Z444 233 aa14.25□□□□□ -0.13
CCND3-221ENST00000514588 BCE1O60756 84 aa14.24□□□□□ -0.13
CCND3-221ENST00000514588 RPL28P46779 137 aaKnown RBP14.24□□□□□ -0.13
CCND3-221ENST00000514588 RAB14P61106 215 aa14.24□□□□□ -0.13
CCND3-221ENST00000514588 SCGB3A1Q96QR1 104 aa14.24□□□□□ -0.13
CCND3-221ENST00000514588 ADCYAP1P18509 176 aa14.23□□□□□ -0.13
CCND3-221ENST00000514588 A0A087X002 238 aa14.22□□□□□ -0.13
CCND3-221ENST00000514588 PDZD11Q5EBL8 140 aa14.22□□□□□ -0.13
CCND3-221ENST00000514588 COX7B2Q8TF08 81 aa14.22□□□□□ -0.13
CCND3-221ENST00000514588 LINC00167Q96N53 147 aa14.22□□□□□ -0.13
CCND3-221ENST00000514588 IGLV5-45A0A087WSX0 123 aa14.21□□□□□ -0.13
CCND3-221ENST00000514588 TINCRA0A1B0GVN0 87 aa14.21□□□□□ -0.13
CCND3-221ENST00000514588 TSPAN13O95857 204 aa14.21□□□□□ -0.13
CCND3-221ENST00000514588 RPL37AP8A6NKH3 93 aa14.2□□□□□ -0.14
CCND3-221ENST00000514588 GAGE10A6NGK3 116 aa14.17□□□□□ -0.14
CCND3-221ENST00000514588 CST9LQ9H4G1 147 aa14.17□□□□□ -0.14
CCND3-221ENST00000514588 MUC2Q02817 5179 aa14.17□□□□□ -0.14
CCND3-221ENST00000514588 LINC01546A6NGU7 62 aa14.16□□□□□ -0.14
CCND3-221ENST00000514588 SPINK8P0C7L1 97 aa14.16□□□□□ -0.14
CCND3-221ENST00000514588 CRYGAP11844 174 aa14.16□□□□□ -0.14
CCND3-221ENST00000514588 IGLV5-37A0A075B6J1 123 aa14.15□□□□□ -0.14
CCND3-221ENST00000514588 TRAV9-1A0A075B6T8 112 aa14.15□□□□□ -0.14
CCND3-221ENST00000514588 RAB5BP61020 215 aa14.15□□□□□ -0.14
CCND3-221ENST00000514588 TYMSOSQ8TAI1 123 aa14.15□□□□□ -0.14
CCND3-221ENST00000514588 LINC01549A6NIU2 74 aa14.14□□□□□ -0.15
CCND3-221ENST00000514588 CLLU1Q5K131 121 aa14.13□□□□□ -0.15
CCND3-221ENST00000514588 KRTAP13-1Q8IUC0 172 aa14.13□□□□□ -0.15
CCND3-221ENST00000514588 ANAPC11Q9NYG5 84 aa14.13□□□□□ -0.15
CCND3-221ENST00000514588 PMVKQ15126 192 aa14.12□□□□□ -0.15
CCND3-221ENST00000514588 GNB1LQ9BYB4 327 aa14.12□□□□□ -0.15
CCND3-221ENST00000514588 NKAPP1Q8N9T2 125 aa14.11□□□□□ -0.15
CCND3-221ENST00000514588 MRPL18Q9H0U6 180 aaKnown RBP14.1□□□□□ -0.15
CCND3-221ENST00000514588 UBE2AP49459 152 aa14.09□□□□□ -0.15
CCND3-221ENST00000514588 KRTAP13-2Q52LG2 175 aa14.09□□□□□ -0.15
CCND3-221ENST00000514588 TMEM218A2RU14 115 aa14.08□□□□□ -0.16
CCND3-221ENST00000514588 SCO1O75880 301 aa14.08□□□□□ -0.16
CCND3-221ENST00000514588 H3BRM9 83 aa14.07□□□□□ -0.16
CCND3-221ENST00000514588 ATP5LO75964 103 aa14.07□□□□□ -0.16
CCND3-221ENST00000514588 UQCC3Q6UW78 93 aa14.07□□□□□ -0.16
CCND3-221ENST00000514588 IGKV2-28A0A075B6P5 120 aa14.06□□□□□ -0.16
CCND3-221ENST00000514588 IGKV2D-28P01615 120 aa14.06□□□□□ -0.16
CCND3-221ENST00000514588 S100PP25815 95 aa14.06□□□□□ -0.16
CCND3-221ENST00000514588 FA2HQ7L5A8 372 aa14.06□□□□□ -0.16
CCND3-221ENST00000514588 IGLV5-39A0A0G2JS06 123 aa14.04□□□□□ -0.16
CCND3-221ENST00000514588 PFN2P35080 140 aa14.04□□□□□ -0.16
CCND3-221ENST00000514588 SMCO4Q9NRQ5 59 aa14.04□□□□□ -0.16
CCND3-221ENST00000514588 IGLC3P0DOY3 106 aa14.03□□□□□ -0.16
CCND3-221ENST00000514588 FAM229BQ4G0N7 80 aa14.03□□□□□ -0.16
CCND3-221ENST00000514588 FABP9Q0Z7S8 132 aa14.01□□□□□ -0.17
CCND3-221ENST00000514588 COX19Q49B96 90 aa14.01□□□□□ -0.17
CCND3-221ENST00000514588 SEC11CQ9BY50 192 aa14.01□□□□□ -0.17
CCND3-221ENST00000514588 A0A0U1RQV1 116 aa14□□□□□ -0.17
CCND3-221ENST00000514588 VPREB1P12018 145 aa14□□□□□ -0.17
CCND3-221ENST00000514588 SND1-IT1Q9HBX3 110 aa14□□□□□ -0.17
CCND3-221ENST00000514588 A0A096LNJ9 63 aa13.99□□□□□ -0.17
CCND3-221ENST00000514588 ZNF22P17026 224 aaPredicted RBP13.99□□□□□ -0.17
CCND3-221ENST00000514588 PRLHP81277 87 aa13.99□□□□□ -0.17
CCND3-221ENST00000514588 LINC00304Q8N9R0 145 aa13.99□□□□□ -0.17
CCND3-221ENST00000514588 RETNLBQ9BQ08 111 aa13.99□□□□□ -0.17
CCND3-221ENST00000514588 ERG28Q9UKR5 140 aa13.99□□□□□ -0.17
CCND3-221ENST00000514588 NDUFA6P56556 154 aa13.98□□□□□ -0.17
CCND3-221ENST00000514588 TMEM126AQ9H061 195 aa13.98□□□□□ -0.17
CCND3-221ENST00000514588 TMEM238C9JI98 176 aa13.97□□□□□ -0.17
CCND3-221ENST00000514588 FAM19A1Q7Z5A9 133 aa13.96□□□□□ -0.17
CCND3-221ENST00000514588 IGKV2D-26A0A0A0MRZ7 120 aa13.95□□□□□ -0.18
CCND3-221ENST00000514588 Q8NDZ9 215 aa13.95□□□□□ -0.18
CCND3-221ENST00000514588 URB1-AS1Q96HZ7 61 aa13.95□□□□□ -0.18
CCND3-221ENST00000514588 M0R378 163 aa13.94□□□□□ -0.18
CCND3-221ENST00000514588 RPL24P83731 157 aaKnown RBP13.94□□□□□ -0.18
CCND3-221ENST00000514588 IFITM2Q01629 132 aa13.94□□□□□ -0.18
CCND3-221ENST00000514588 COX17Q14061 63 aa13.94□□□□□ -0.18
CCND3-221ENST00000514588 ZNF625Q96I27 306 aaPredicted RBP13.94□□□□□ -0.18
CCND3-221ENST00000514588 C18orf32Q8TCD1 76 aa13.91□□□□□ -0.18
CCND3-221ENST00000514588 C11orf86A6NJI1 115 aa13.9□□□□□ -0.18
CCND3-221ENST00000514588 HBDP02042 147 aa13.9□□□□□ -0.18
CCND3-221ENST00000514588 LINC00614P0C842 121 aa13.9□□□□□ -0.18
CCND3-221ENST00000514588 PMCHL1Q16048 86 aa13.9□□□□□ -0.18
CCND3-221ENST00000514588 PLEKHB2Q96CS7 222 aa13.9□□□□□ -0.18
CCND3-221ENST00000514588 RPS10P5Q9NQ39 176 aa13.89□□□□□ -0.19
CCND3-221ENST00000514588 RHEBQ15382 184 aa13.88□□□□□ -0.19
CCND3-221ENST00000514588 C10orf91Q5T1B1 145 aa13.88□□□□□ -0.19
CCND3-221ENST00000514588 TPRXLQ17RH7 258 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms