RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 WNK3Q9BYP7 1800 aa0.96□□□□□ -2.26
SGCB-203ENST00000514133 ABCA10Q8WWZ4 1543 aa0.96□□□□□ -2.26
SGCB-203ENST00000514133 POLR1AO95602 1720 aaPredicted RBP0.96□□□□□ -2.26
SGCB-203ENST00000514133 NAP1L6A6NFF2 107 aa0.96□□□□□ -2.26
SGCB-203ENST00000514133 ACBD7Q8N6N7 88 aa0.96□□□□□ -2.26
SGCB-203ENST00000514133 C10orf95Q9H7T3 257 aa0.96□□□□□ -2.26
SGCB-203ENST00000514133 SHPRHQ149N8 1683 aa0.96□□□□□ -2.26
SGCB-203ENST00000514133 PLXNB2O15031 1838 aa0.96□□□□□ -2.26
SGCB-203ENST00000514133 SPTA1P02549 2419 aa0.96□□□□□ -2.26
SGCB-203ENST00000514133 RIF1Q5UIP0 2472 aaKnown RBP0.95□□□□□ -2.26
SGCB-203ENST00000514133 ATP10BO94823 1461 aa0.95□□□□□ -2.26
SGCB-203ENST00000514133 FAT4Q6V0I7 4981 aa0.95□□□□□ -2.26
SGCB-203ENST00000514133 F8VRH5 84 aa0.95□□□□□ -2.26
SGCB-203ENST00000514133 H3BQ15 152 aa0.95□□□□□ -2.26
SGCB-203ENST00000514133 Q0VG73 95 aa0.95□□□□□ -2.26
SGCB-203ENST00000514133 Q5VV11 94 aa0.95□□□□□ -2.26
SGCB-203ENST00000514133 SMIM4Q8WVI0 70 aa0.95□□□□□ -2.26
SGCB-203ENST00000514133 TLN2Q9Y4G6 2542 aa0.95□□□□□ -2.26
SGCB-203ENST00000514133 WDR87Q6ZQQ6 2873 aa0.95□□□□□ -2.26
SGCB-203ENST00000514133 CELSR1Q9NYQ6 3014 aa0.95□□□□□ -2.26
SGCB-203ENST00000514133 MXRA5Q9NR99 2828 aa0.95□□□□□ -2.26
SGCB-203ENST00000514133 TOP2AP11388 1531 aaKnown RBP0.94□□□□□ -2.26
SGCB-203ENST00000514133 MAP3K1Q13233 1512 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.94□□□□□ -2.26
SGCB-203ENST00000514133 ZC3H13Q5T200 1668 aaKnown RBP0.94□□□□□ -2.26
SGCB-203ENST00000514133 TNRC6CQ9HCJ0 1690 aaKnown RBP0.94□□□□□ -2.26
SGCB-203ENST00000514133 FANCAO15360 1455 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 OTOGQ6ZRI0 2925 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 ABCA9Q8IUA7 1624 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 LOC285095A0A1B0GVY8 99 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 CRYM-AS1A6NIL9 109 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 G3V318 75 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 NMBP08949 121 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 SPINK7P58062 85 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 NCMAPQ5T1S8 102 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 CADP27708 2225 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 ARHGEF5Q12774 1597 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 CEP170BQ9Y4F5 1589 aaPredicted RBP0.94□□□□□ -2.26
SGCB-203ENST00000514133 SSPOA2VEC9 5147 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 IGF2RP11717 2491 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 CROCC2H7BZ55 1655 aa0.94□□□□□ -2.26
SGCB-203ENST00000514133 CLTCQ00610 1675 aaKnown RBP0.94□□□□□ -2.26
SGCB-203ENST00000514133 PRRC2CQ9Y520 2896 aaKnown RBP0.94□□□□□ -2.26
SGCB-203ENST00000514133 MYO3AQ8NEV4 1616 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 XIRP2A4UGR9 3374 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 TGP01266 2768 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 LRBAP50851 2863 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 ANKRD26Q9UPS8 1709 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 ABCA8O94911 1581 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 IGLC7A0M8Q6 106 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 S100A8P05109 93 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 KRTDAPP60985 99 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 TMEM170BQ5T4T1 132 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 BAGE2Q86Y30 109 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 CDH23Q9H251 3354 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 MROH2AA6NES4 1674 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 IQGAP1P46940 1657 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 SCN7AQ01118 1682 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 ITSN2Q9NZM3 1697 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 EFCAB5A4FU69 1503 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 ERICH3Q5RHP9 1530 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 HERC2O95714 4834 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 FRYQ5TBA9 3013 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 KDM3BQ7LBC6 1761 aa0.93□□□□□ -2.26
SGCB-203ENST00000514133 NIPBLQ6KC79 2804 aaeCLIP0.93□□□□□ -2.26
SGCB-203ENST00000514133 LRRC37A2A6NM11 1700 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 NUP188Q5SRE5 1749 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 MARF1Q9Y4F3 1742 aaKnown RBP0.92□□□□□ -2.26
SGCB-203ENST00000514133 VPS8Q8N3P4 1428 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 M0R143 59 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 UQCR11O14957 56 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 APOC3P02656 99 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 SPATA8Q6RVD6 105 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 SFTA2Q6UW10 78 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 UBE2DNLQ8IWF7 75 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 FAM167A-AS1Q96KT0 104 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 AMELXQ99217 191 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 PROK2Q9HC23 129 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 ABCC1P33527 1531 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 VPS13AQ96RL7 3174 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 TENM2Q9NT68 2774 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 DEPDC5O75140 1603 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 PREX2Q70Z35 1606 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 ABCA6Q8N139 1617 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 MAGI2Q86UL8 1455 aa0.92□□□□□ -2.26
SGCB-203ENST00000514133 DIP2CQ9Y2E4 1556 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 MAST1Q9Y2H9 1570 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 MGAM2Q2M2H8 2515 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 FAM186AA6NE01 2351 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 ABCC5O15440 1437 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 SLIT1O75093 1534 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 AGLP35573 1532 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 PDCD11Q14690 1871 aaKnown RBP0.91□□□□□ -2.26
SGCB-203ENST00000514133 TENM3Q9P273 2699 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 TRAV22A0A0B4J277 110 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 hADV29S1A0JD25 119 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 GNGT2O14610 69 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 SFT2D2O95562 160 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 CDC42SE2Q9NRR3 84 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 AP4S1Q9Y587 144 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms