RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 HYDINQ4G0P3 5121 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 KIAA1109Q2LD37 5005 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 K7EQZ3 153 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 SAA2P0DJI9 122 aaPredicted RBP-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 KRTDAPP60985 99 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 GTF2H5Q6ZYL4 71 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 LINC01600Q96MT4 127 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 C12orf57Q99622 126 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 LINC00846Q9NV44 126 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 FAM135AQ9P2D6 1515 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 TEP1Q99973 2627 aaKnown RBP-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 HERC1Q15751 4861 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 KDM5AP29375 1690 aaKnown RBP-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 NRKQ7Z2Y5 1582 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 ADGRL2O95490 1459 aa-0.16□□□□□ -2.43
TRAPPC11-210ENST00000513600 HECTD4Q9Y4D8 3996 aa-0.16□□□□□ -2.43
TRAPPC11-210ENST00000513600 PDZD2O15018 2839 aa-0.16□□□□□ -2.43
TRAPPC11-210ENST00000513600 ARHGAP5Q13017 1502 aa-0.16□□□□□ -2.43
TRAPPC11-210ENST00000513600 KNL1Q8NG31 2342 aa-0.16□□□□□ -2.43
TRAPPC11-210ENST00000513600 LINC00959A0A1B0GUT2 108 aa-0.16□□□□□ -2.44
TRAPPC11-210ENST00000513600 A0A1B0GWA3 101 aa-0.16□□□□□ -2.44
TRAPPC11-210ENST00000513600 FAM223BA6NKX1 122 aa-0.16□□□□□ -2.44
TRAPPC11-210ENST00000513600 TMEM262E9PQX1 116 aa-0.16□□□□□ -2.44
TRAPPC11-210ENST00000513600 HSD52Q0P140 79 aa-0.16□□□□□ -2.44
TRAPPC11-210ENST00000513600 SFTA2Q6UW10 78 aa-0.16□□□□□ -2.44
TRAPPC11-210ENST00000513600 FDCSPQ8NFU4 85 aa-0.16□□□□□ -2.44
TRAPPC11-210ENST00000513600 TSC2P49815 1807 aa-0.16□□□□□ -2.44
TRAPPC11-210ENST00000513600 PRKDCP78527 4128 aaKnown RBP-0.16□□□□□ -2.44
TRAPPC11-210ENST00000513600 TGP01266 2768 aa-0.16□□□□□ -2.44
TRAPPC11-210ENST00000513600 SETBP1Q9Y6X0 1596 aa-0.16□□□□□ -2.44
TRAPPC11-210ENST00000513600 SPTBN4Q9H254 2564 aa-0.16□□□□□ -2.44
TRAPPC11-210ENST00000513600 CRYM-AS1A6NIL9 109 aa-0.17□□□□□ -2.44
TRAPPC11-210ENST00000513600 SPINK4O60575 86 aa-0.17□□□□□ -2.44
TRAPPC11-210ENST00000513600 SNCAP37840 140 aa-0.17□□□□□ -2.44
TRAPPC11-210ENST00000513600 UBR4Q5T4S7 5183 aa-0.17□□□□□ -2.44
TRAPPC11-210ENST00000513600 CGREF1Q99674 301 aa-0.17□□□□□ -2.44
TRAPPC11-210ENST00000513600 ITPR3Q14573 2671 aa-0.17□□□□□ -2.44
TRAPPC11-210ENST00000513600 C1orf167Q5SNV9 1468 aa-0.17□□□□□ -2.44
TRAPPC11-210ENST00000513600 DSPP15924 2871 aaKnown RBP-0.17□□□□□ -2.44
TRAPPC11-210ENST00000513600 PRRC2CQ9Y520 2896 aaKnown RBP-0.17□□□□□ -2.44
TRAPPC11-210ENST00000513600 PCNX1Q96RV3 2341 aa-0.18□□□□□ -2.44
TRAPPC11-210ENST00000513600 SPHKAPQ2M3C7 1700 aa-0.18□□□□□ -2.44
TRAPPC11-210ENST00000513600 hADV29S1A0JD25 119 aa-0.18□□□□□ -2.44
TRAPPC11-210ENST00000513600 C20orf202A1L168 122 aa-0.18□□□□□ -2.44
TRAPPC11-210ENST00000513600 USMG5Q96IX5 58 aa-0.18□□□□□ -2.44
TRAPPC11-210ENST00000513600 RYR1P21817 5038 aa-0.18□□□□□ -2.44
TRAPPC11-210ENST00000513600 RNF213Q63HN8 5207 aa-0.19□□□□□ -2.44
TRAPPC11-210ENST00000513600 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.19□□□□□ -2.44
TRAPPC11-210ENST00000513600 NCOA3Q9Y6Q9 1424 aa-0.19□□□□□ -2.44
TRAPPC11-210ENST00000513600 COX8AP10176 69 aa-0.19□□□□□ -2.44
TRAPPC11-210ENST00000513600 SPRR2BP35325 72 aa-0.19□□□□□ -2.44
TRAPPC11-210ENST00000513600 SEC11AP67812 179 aa-0.19□□□□□ -2.44
TRAPPC11-210ENST00000513600 KRTAP20-2Q3LI61 65 aa-0.19□□□□□ -2.44
TRAPPC11-210ENST00000513600 LCN9Q8WX39 176 aa-0.19□□□□□ -2.44
TRAPPC11-210ENST00000513600 USP9XQ93008 2570 aaPredicted RBP-0.19□□□□□ -2.44
TRAPPC11-210ENST00000513600 NBASA2RRP1 2371 aa-0.19□□□□□ -2.44
TRAPPC11-210ENST00000513600 EPPK1P58107 5090 aaKnown RBP-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 KIAA0556O60303 1618 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 ABCC5O15440 1437 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 FASNP49327 2511 aaKnown RBP-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 PDCD11Q14690 1871 aaKnown RBP-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 SCN7AQ01118 1682 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 COL4A6Q14031 1691 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 MXRA5Q9NR99 2828 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 PLEKHH2Q8IVE3 1493 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 A0A0G2JMZ2 1700 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 SYS1-DBNDD2H3BUS1 97 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 NDUFC1O43677 76 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 S100PP25815 95 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 MT4P47944 62 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 KRTAP19-7Q3SYF9 63 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 LRP1BQ9NZR2 4599 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 FAT1Q14517 4588 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 TOP2BQ02880 1626 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 USH2AO75445 5202 aa-0.2□□□□□ -2.44
TRAPPC11-210ENST00000513600 XRN1Q8IZH2 1706 aaKnown RBP-0.21□□□□□ -2.44
TRAPPC11-210ENST00000513600 WDR87Q6ZQQ6 2873 aa-0.21□□□□□ -2.44
TRAPPC11-210ENST00000513600 ZFYVE16Q7Z3T8 1539 aa-0.21□□□□□ -2.44
TRAPPC11-210ENST00000513600 A0A087WVE0 104 aa-0.21□□□□□ -2.44
TRAPPC11-210ENST00000513600 C7orf77A4D0Y5 90 aa-0.21□□□□□ -2.44
TRAPPC11-210ENST00000513600 LOC730098B7Z3J9 87 aa-0.21□□□□□ -2.44
TRAPPC11-210ENST00000513600 DEFB105AQ8NG35 78 aa-0.21□□□□□ -2.44
TRAPPC11-210ENST00000513600 VAMP8Q9BV40 100 aa-0.21□□□□□ -2.44
TRAPPC11-210ENST00000513600 FXYD6Q9H0Q3 95 aa-0.21□□□□□ -2.44
TRAPPC11-210ENST00000513600 RIF1Q5UIP0 2472 aaKnown RBP-0.21□□□□□ -2.44
TRAPPC11-210ENST00000513600 PDE4DIPQ5VU43 2346 aa-0.21□□□□□ -2.44
TRAPPC11-210ENST00000513600 NUP188Q5SRE5 1749 aa-0.21□□□□□ -2.44
TRAPPC11-210ENST00000513600 CCDC141Q6ZP82 1450 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 REV3LO60673 3130 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 CC2D2AQ9P2K1 1620 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 TRBV25-1A0A075B6N4 114 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 A0A1B0GU69 56 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 TMEM218A2RU14 115 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 H3BQF6 201 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 GNGT2O14610 69 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 PMCHL1Q16048 86 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 KRTAP19-8Q3LI54 63 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 CACFD1Q9UGQ2 172 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 TOPAZ1Q8N9V7 1692 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 SPG11Q96JI7 2443 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms