RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 C2orf88Q9BSF0 95 aa-0.39□□□□□ -2.47
SMN1-208ENST00000513228 FXYD6Q9H0Q3 95 aa-0.39□□□□□ -2.47
SMN1-208ENST00000513228 NUP188Q5SRE5 1749 aa-0.39□□□□□ -2.47
SMN1-208ENST00000513228 NLRP1Q9C000 1473 aa-0.4□□□□□ -2.47
SMN1-208ENST00000513228 CHD1O14646 1710 aa-0.4□□□□□ -2.47
SMN1-208ENST00000513228 XRN1Q8IZH2 1706 aaKnown RBP-0.4□□□□□ -2.47
SMN1-208ENST00000513228 NAP1L6A6NFF2 107 aa-0.4□□□□□ -2.47
SMN1-208ENST00000513228 LOC730098B7Z3J9 87 aa-0.4□□□□□ -2.47
SMN1-208ENST00000513228 COX6CP09669 75 aa-0.4□□□□□ -2.47
SMN1-208ENST00000513228 S100A1P23297 94 aa-0.4□□□□□ -2.47
SMN1-208ENST00000513228 PRO1854Q9UHT4 67 aa-0.4□□□□□ -2.47
SMN1-208ENST00000513228 GOLGA4Q13439 2230 aaKnown RBP-0.4□□□□□ -2.47
SMN1-208ENST00000513228 COL4A6Q14031 1691 aa-0.4□□□□□ -2.47
SMN1-208ENST00000513228 SETXQ7Z333 2677 aaKnown RBP-0.41□□□□□ -2.47
SMN1-208ENST00000513228 MAPKBP1O60336 1514 aa-0.41□□□□□ -2.48
SMN1-208ENST00000513228 A0A1B0GWA3 101 aa-0.41□□□□□ -2.48
SMN1-208ENST00000513228 TRAPPC2P0DI81 140 aa-0.41□□□□□ -2.48
SMN1-208ENST00000513228 TRAPPC2BP0DI82 140 aa-0.41□□□□□ -2.48
SMN1-208ENST00000513228 KRTAP19-8Q3LI54 63 aa-0.41□□□□□ -2.48
SMN1-208ENST00000513228 DEFB105AQ8NG35 78 aa-0.41□□□□□ -2.48
SMN1-208ENST00000513228 PRO1933Q9H354 126 aa-0.41□□□□□ -2.48
SMN1-208ENST00000513228 EP300Q09472 2414 aaPredicted RBP-0.41□□□□□ -2.48
SMN1-208ENST00000513228 TOPAZ1Q8N9V7 1692 aa-0.41□□□□□ -2.48
SMN1-208ENST00000513228 SETBP1Q9Y6X0 1596 aa-0.41□□□□□ -2.48
SMN1-208ENST00000513228 FLGP20930 4061 aaPredicted RBP-0.41□□□□□ -2.48
SMN1-208ENST00000513228 NBPF19A0A087WUL8 3843 aa-0.41□□□□□ -2.48
SMN1-208ENST00000513228 DCHS2Q6V1P9 2916 aa-0.41□□□□□ -2.48
SMN1-208ENST00000513228 PLEKHH2Q8IVE3 1493 aa-0.41□□□□□ -2.48
SMN1-208ENST00000513228 CREBBPQ92793 2442 aa-0.42□□□□□ -2.48
SMN1-208ENST00000513228 PIEZO2Q9H5I5 2752 aa-0.42□□□□□ -2.48
SMN1-208ENST00000513228 H3BQ15 152 aa-0.42□□□□□ -2.48
SMN1-208ENST00000513228 SPINK4O60575 86 aa-0.42□□□□□ -2.48
SMN1-208ENST00000513228 SNCAP37840 140 aa-0.42□□□□□ -2.48
SMN1-208ENST00000513228 GNG8Q9UK08 70 aa-0.42□□□□□ -2.48
SMN1-208ENST00000513228 SETD2Q9BYW2 2564 aaPredicted RBP-0.42□□□□□ -2.48
SMN1-208ENST00000513228 A0A0G2JMZ2 1700 aa-0.42□□□□□ -2.48
SMN1-208ENST00000513228 FMN2Q9NZ56 1722 aa-0.42□□□□□ -2.48
SMN1-208ENST00000513228 MAP1BP46821 2468 aaKnown RBP-0.43□□□□□ -2.48
SMN1-208ENST00000513228 LAMA2P24043 3122 aaKnown RBP-0.43□□□□□ -2.48
SMN1-208ENST00000513228 WNK1Q9H4A3 2382 aa-0.43□□□□□ -2.48
SMN1-208ENST00000513228 hADV29S1A0JD25 119 aa-0.43□□□□□ -2.48
SMN1-208ENST00000513228 CRYM-AS1A6NIL9 109 aa-0.43□□□□□ -2.48
SMN1-208ENST00000513228 SAA2P0DJI9 122 aaPredicted RBP-0.43□□□□□ -2.48
SMN1-208ENST00000513228 C12orf57Q99622 126 aa-0.43□□□□□ -2.48
SMN1-208ENST00000513228 LINC00846Q9NV44 126 aa-0.43□□□□□ -2.48
SMN1-208ENST00000513228 MARF1Q9Y4F3 1742 aaKnown RBP-0.44□□□□□ -2.48
SMN1-208ENST00000513228 COL6A3P12111 3177 aa-0.44□□□□□ -2.48
SMN1-208ENST00000513228 PAPPA2Q9BXP8 1791 aa-0.44□□□□□ -2.48
SMN1-208ENST00000513228 ABCC5O15440 1437 aa-0.44□□□□□ -2.48
SMN1-208ENST00000513228 NBEAL1Q6ZS30 2694 aa-0.44□□□□□ -2.48
SMN1-208ENST00000513228 A0A087WVE0 104 aa-0.44□□□□□ -2.48
SMN1-208ENST00000513228 SYS1-DBNDD2H3BUS1 97 aa-0.44□□□□□ -2.48
SMN1-208ENST00000513228 M0R2T5 61 aa-0.44□□□□□ -2.48
SMN1-208ENST00000513228 SARNPP82979 210 aaKnown RBP-0.44□□□□□ -2.48
SMN1-208ENST00000513228 TMEM203Q969S6 136 aa-0.44□□□□□ -2.48
SMN1-208ENST00000513228 STAB2Q8WWQ8 2551 aa-0.44□□□□□ -2.48
SMN1-208ENST00000513228 IQSEC2Q5JU85 1478 aa-0.44□□□□□ -2.48
SMN1-208ENST00000513228 APC2O95996 2303 aa-0.44□□□□□ -2.48
SMN1-208ENST00000513228 ABCA13Q86UQ4 5058 aa-0.45□□□□□ -2.48
SMN1-208ENST00000513228 COX8AP10176 69 aa-0.45□□□□□ -2.48
SMN1-208ENST00000513228 SEC11AP67812 179 aa-0.45□□□□□ -2.48
SMN1-208ENST00000513228 HSD52Q0P140 79 aa-0.45□□□□□ -2.48
SMN1-208ENST00000513228 USMG5Q96IX5 58 aa-0.45□□□□□ -2.48
SMN1-208ENST00000513228 APLNQ9ULZ1 77 aa-0.45□□□□□ -2.48
SMN1-208ENST00000513228 PKHD1P08F94 4074 aa-0.45□□□□□ -2.48
SMN1-208ENST00000513228 ABCA3Q99758 1704 aa-0.45□□□□□ -2.48
SMN1-208ENST00000513228 SONP18583 2426 aaKnown RBP-0.45□□□□□ -2.48
SMN1-208ENST00000513228 TEP1Q99973 2627 aaKnown RBP-0.46□□□□□ -2.48
SMN1-208ENST00000513228 HECTD1Q9ULT8 2610 aa-0.46□□□□□ -2.48
SMN1-208ENST00000513228 SPTA1P02549 2419 aa-0.46□□□□□ -2.48
SMN1-208ENST00000513228 SLIT1O75093 1534 aa-0.46□□□□□ -2.48
SMN1-208ENST00000513228 FAM135AQ9P2D6 1515 aa-0.46□□□□□ -2.48
SMN1-208ENST00000513228 A0A1B0GU69 56 aa-0.46□□□□□ -2.48
SMN1-208ENST00000513228 TMEM262E9PQX1 116 aa-0.46□□□□□ -2.48
SMN1-208ENST00000513228 KRTDAPP60985 99 aa-0.46□□□□□ -2.48
SMN1-208ENST00000513228 MRPS10P82664 201 aaKnown RBP-0.46□□□□□ -2.48
SMN1-208ENST00000513228 CRIPTQ9P021 101 aa-0.46□□□□□ -2.48
SMN1-208ENST00000513228 ATRQ13535 2644 aa-0.46□□□□□ -2.48
SMN1-208ENST00000513228 PDCD11Q14690 1871 aaKnown RBP-0.46□□□□□ -2.48
SMN1-208ENST00000513228 TGP01266 2768 aa-0.46□□□□□ -2.48
SMN1-208ENST00000513228 DNHD1Q96M86 4753 aa-0.46□□□□□ -2.48
SMN1-208ENST00000513228 NKTRP30414 1462 aaKnown RBP-0.47□□□□□ -2.48
SMN1-208ENST00000513228 ZFYVE16Q7Z3T8 1539 aa-0.47□□□□□ -2.48
SMN1-208ENST00000513228 CPSF4LA6NMK7 179 aaKnown RBP-0.47□□□□□ -2.48
SMN1-208ENST00000513228 ASIPP42127 132 aa-0.47□□□□□ -2.48
SMN1-208ENST00000513228 GTF2H5Q6ZYL4 71 aa-0.47□□□□□ -2.48
SMN1-208ENST00000513228 CGREF1Q99674 301 aa-0.47□□□□□ -2.48
SMN1-208ENST00000513228 URB1O60287 2271 aaKnown RBP-0.47□□□□□ -2.48
SMN1-208ENST00000513228 KNDC1Q76NI1 1749 aa-0.47□□□□□ -2.49
SMN1-208ENST00000513228 SVEP1Q4LDE5 3571 aa-0.47□□□□□ -2.49
SMN1-208ENST00000513228 USP9YO00507 2555 aaPredicted RBP-0.48□□□□□ -2.49
SMN1-208ENST00000513228 DNAJC13O75165 2243 aa-0.48□□□□□ -2.49
SMN1-208ENST00000513228 TARBP1Q13395 1621 aaKnown RBP-0.48□□□□□ -2.49
SMN1-208ENST00000513228 A0A0G2JND7 137 aa-0.48□□□□□ -2.49
SMN1-208ENST00000513228 C7orf77A4D0Y5 90 aa-0.48□□□□□ -2.49
SMN1-208ENST00000513228 C6orf201Q7Z4U5 140 aa-0.48□□□□□ -2.49
SMN1-208ENST00000513228 CHD8Q9HCK8 2581 aa-0.48□□□□□ -2.49
SMN1-208ENST00000513228 ITPR3Q14573 2671 aa-0.48□□□□□ -2.49
SMN1-208ENST00000513228 MXRA5Q9NR99 2828 aa-0.48□□□□□ -2.49
SMN1-208ENST00000513228 EDC4Q6P2E9 1401 aaKnown RBP-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms