RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 C6orf201Q7Z4U5 140 aa0.23□□□□□ -2.37
PDGFC-207ENST00000511985 DEFB107AQ8IZN7 70 aa0.23□□□□□ -2.37
PDGFC-207ENST00000511985 SCN7AQ01118 1682 aa0.23□□□□□ -2.37
PDGFC-207ENST00000511985 EDC4Q6P2E9 1401 aaKnown RBP0.22□□□□□ -2.37
PDGFC-207ENST00000511985 SBF2Q86WG5 1849 aa0.22□□□□□ -2.37
PDGFC-207ENST00000511985 DOCK11Q5JSL3 2073 aa0.22□□□□□ -2.37
PDGFC-207ENST00000511985 A0A1B0GU69 56 aa0.22□□□□□ -2.37
PDGFC-207ENST00000511985 K7EQZ3 153 aa0.22□□□□□ -2.37
PDGFC-207ENST00000511985 COX6B1P14854 86 aa0.22□□□□□ -2.37
PDGFC-207ENST00000511985 PAPPAQ13219 1627 aa0.22□□□□□ -2.37
PDGFC-207ENST00000511985 MACF1Q9UPN3 7388 aaKnown RBP0.22□□□□□ -2.37
PDGFC-207ENST00000511985 BAZ1AQ9NRL2 1556 aaPredicted RBP0.22□□□□□ -2.37
PDGFC-207ENST00000511985 SETBP1Q9Y6X0 1596 aa0.22□□□□□ -2.37
PDGFC-207ENST00000511985 PLIN4Q96Q06 1357 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 NCOR2Q9Y618 2525 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 ASXL3Q9C0F0 2248 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 FAM208BQ5VWN6 2430 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 D6R8Y8 96 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 LEPROTL1O95214 131 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 HMGN2P05204 90 aaKnown RBP0.21□□□□□ -2.38
PDGFC-207ENST00000511985 SPRR1AP35321 89 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 SMIM11AP58511 58 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 GNGT1P63211 74 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 MUSTN1Q8IVN3 82 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 ABCC3O15438 1527 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 CUX1P39880 1505 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 ANKRD26Q9UPS8 1709 aa0.21□□□□□ -2.38
PDGFC-207ENST00000511985 OTOGQ6ZRI0 2925 aa0.2□□□□□ -2.38
PDGFC-207ENST00000511985 NHSL1Q5SYE7 1610 aa0.2□□□□□ -2.38
PDGFC-207ENST00000511985 FXYD6-FXYD2A0A087WZ82 144 aa0.2□□□□□ -2.38
PDGFC-207ENST00000511985 CFDP00746 253 aaPredicted RBP0.2□□□□□ -2.38
PDGFC-207ENST00000511985 PEA15Q15121 130 aa0.2□□□□□ -2.38
PDGFC-207ENST00000511985 S100A16Q96FQ6 103 aaKnown RBP0.2□□□□□ -2.38
PDGFC-207ENST00000511985 RABAC1Q9UI14 185 aa0.2□□□□□ -2.38
PDGFC-207ENST00000511985 UBE2D4Q9Y2X8 147 aa0.2□□□□□ -2.38
PDGFC-207ENST00000511985 U3KQA8 63 aa0.2□□□□□ -2.38
PDGFC-207ENST00000511985 WNK3Q9BYP7 1800 aa0.2□□□□□ -2.38
PDGFC-207ENST00000511985 SAMD9Q5K651 1589 aa0.19□□□□□ -2.38
PDGFC-207ENST00000511985 SLIT1O75093 1534 aa0.19□□□□□ -2.38
PDGFC-207ENST00000511985 A0A0G2JMZ2 1700 aa0.19□□□□□ -2.38
PDGFC-207ENST00000511985 XRN1Q8IZH2 1706 aaKnown RBP0.19□□□□□ -2.38
PDGFC-207ENST00000511985 CCDC141Q6ZP82 1450 aa0.19□□□□□ -2.38
PDGFC-207ENST00000511985 CYB5AP00167 134 aa0.19□□□□□ -2.38
PDGFC-207ENST00000511985 NMSQ5H8A3 153 aa0.19□□□□□ -2.38
PDGFC-207ENST00000511985 USMG5Q96IX5 58 aa0.19□□□□□ -2.38
PDGFC-207ENST00000511985 DMBT1Q9UGM3 2413 aaPredicted RBP0.19□□□□□ -2.38
PDGFC-207ENST00000511985 RB1CC1Q8TDY2 1594 aa0.19□□□□□ -2.38
PDGFC-207ENST00000511985 NUP188Q5SRE5 1749 aa0.18□□□□□ -2.38
PDGFC-207ENST00000511985 PLXNB2O15031 1838 aa0.18□□□□□ -2.38
PDGFC-207ENST00000511985 MED14O60244 1454 aa0.18□□□□□ -2.38
PDGFC-207ENST00000511985 IGLC2P0DOY2 106 aa0.18□□□□□ -2.38
PDGFC-207ENST00000511985 IGLC3P0DOY3 106 aa0.18□□□□□ -2.38
PDGFC-207ENST00000511985 COX8AP10176 69 aa0.18□□□□□ -2.38
PDGFC-207ENST00000511985 SPRR1BP22528 89 aa0.18□□□□□ -2.38
PDGFC-207ENST00000511985 SNRPFP62306 86 aaKnown RBP0.18□□□□□ -2.38
PDGFC-207ENST00000511985 DEFB109BQ30KR1 87 aa0.18□□□□□ -2.38
PDGFC-207ENST00000511985 NEXMIFQ5QGS0 1516 aa0.18□□□□□ -2.38
PDGFC-207ENST00000511985 TARBP1Q13395 1621 aaKnown RBP0.17□□□□□ -2.38
PDGFC-207ENST00000511985 TDRG1Q3Y452 100 aa0.17□□□□□ -2.38
PDGFC-207ENST00000511985 LINC00643Q86TS7 51 aa0.17□□□□□ -2.38
PDGFC-207ENST00000511985 UACAQ9BZF9 1416 aa0.17□□□□□ -2.38
PDGFC-207ENST00000511985 BTAF1O14981 1849 aa0.17□□□□□ -2.38
PDGFC-207ENST00000511985 CLTCQ00610 1675 aaKnown RBP0.17□□□□□ -2.38
PDGFC-207ENST00000511985 AKAP12Q02952 1782 aa0.17□□□□□ -2.38
PDGFC-207ENST00000511985 KIAA0556O60303 1618 aa0.16□□□□□ -2.38
PDGFC-207ENST00000511985 LRP1Q07954 4544 aaKnown RBP0.16□□□□□ -2.38
PDGFC-207ENST00000511985 MYMXA0A1B0GTQ4 84 aa0.16□□□□□ -2.38
PDGFC-207ENST00000511985 IQCF6A8MYZ5 107 aa0.16□□□□□ -2.38
PDGFC-207ENST00000511985 ACYP1P07311 99 aa0.16□□□□□ -2.38
PDGFC-207ENST00000511985 PLGLAQ15195 96 aa0.16□□□□□ -2.38
PDGFC-207ENST00000511985 CRIPTQ9P021 101 aa0.16□□□□□ -2.38
PDGFC-207ENST00000511985 SHPRHQ149N8 1683 aa0.16□□□□□ -2.38
PDGFC-207ENST00000511985 NKTRP30414 1462 aaKnown RBP0.16□□□□□ -2.38
PDGFC-207ENST00000511985 ATP7BP35670 1465 aa0.16□□□□□ -2.38
PDGFC-207ENST00000511985 AHCTF1Q8WYP5 2266 aa0.15□□□□□ -2.39
PDGFC-207ENST00000511985 A0A1B0GUT8 65 aa0.15□□□□□ -2.39
PDGFC-207ENST00000511985 MYO3AQ8NEV4 1616 aa0.15□□□□□ -2.39
PDGFC-207ENST00000511985 KNDC1Q76NI1 1749 aa0.15□□□□□ -2.39
PDGFC-207ENST00000511985 MON2Q7Z3U7 1717 aa0.15□□□□□ -2.39
PDGFC-207ENST00000511985 LRRC9Q6ZRR7 1453 aa0.15□□□□□ -2.39
PDGFC-207ENST00000511985 PPRC1Q5VV67 1664 aaKnown RBP0.14□□□□□ -2.39
PDGFC-207ENST00000511985 UNC79Q9P2D8 2635 aa0.14□□□□□ -2.39
PDGFC-207ENST00000511985 CPSF4LA6NMK7 179 aaKnown RBP0.14□□□□□ -2.39
PDGFC-207ENST00000511985 I3L3M4 83 aa0.14□□□□□ -2.39
PDGFC-207ENST00000511985 DEFB112Q30KQ8 113 aa0.14□□□□□ -2.39
PDGFC-207ENST00000511985 MAGI2Q86UL8 1455 aa0.14□□□□□ -2.39
PDGFC-207ENST00000511985 LRRC37AA6NMS7 1700 aa0.13□□□□□ -2.39
PDGFC-207ENST00000511985 KIAA1551Q9HCM1 1747 aa0.13□□□□□ -2.39
PDGFC-207ENST00000511985 SPTY2D1-AS1A0A0U1RR47 76 aa0.13□□□□□ -2.39
PDGFC-207ENST00000511985 KANTRA0A1W2PQU2 76 aa0.13□□□□□ -2.39
PDGFC-207ENST00000511985 CEBPZOSA8MTT3 80 aa0.13□□□□□ -2.39
PDGFC-207ENST00000511985 SPINK4O60575 86 aa0.13□□□□□ -2.39
PDGFC-207ENST00000511985 DEFB105AQ8NG35 78 aa0.13□□□□□ -2.39
PDGFC-207ENST00000511985 MRPL34Q9BQ48 92 aaKnown RBP0.13□□□□□ -2.39
PDGFC-207ENST00000511985 CCDC18Q5T9S5 1454 aa0.13□□□□□ -2.39
PDGFC-207ENST00000511985 SPTBN2O15020 2390 aa0.13□□□□□ -2.39
PDGFC-207ENST00000511985 PDCD11Q14690 1871 aaKnown RBP0.12□□□□□ -2.39
PDGFC-207ENST00000511985 PAPPA2Q9BXP8 1791 aa0.12□□□□□ -2.39
PDGFC-207ENST00000511985 CACNA1CQ13936 2221 aa0.12□□□□□ -2.39
PDGFC-207ENST00000511985 COX7BP24311 80 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms