RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 CKS1BP61024 79 aa9.24□□□□□ -0.93
COL1A1-213ENST00000511732 UBE2BP63146 152 aa9.24□□□□□ -0.93
COL1A1-213ENST00000511732 ALKBH7Q9BT30 221 aaPredicted RBP9.24□□□□□ -0.93
COL1A1-213ENST00000511732 RNF213Q63HN8 5207 aa9.24□□□□□ -0.93
COL1A1-213ENST00000511732 KRTAP1-4P0C5Y4 121 aa9.23□□□□□ -0.93
COL1A1-213ENST00000511732 UQCC3Q6UW78 93 aa9.23□□□□□ -0.93
COL1A1-213ENST00000511732 TRAV9-1A0A075B6T8 112 aa9.22□□□□□ -0.93
COL1A1-213ENST00000511732 G0S2P27469 103 aa9.22□□□□□ -0.93
COL1A1-213ENST00000511732 SEC11AP67812 179 aa9.22□□□□□ -0.93
COL1A1-213ENST00000511732 PAPPA-AS1Q5QFB9 102 aa9.22□□□□□ -0.93
COL1A1-213ENST00000511732 ERASQ7Z444 233 aa9.22□□□□□ -0.93
COL1A1-213ENST00000511732 GEMIN7Q9H840 131 aaKnown RBP9.22□□□□□ -0.93
COL1A1-213ENST00000511732 XAGE1AQ9HD64 81 aa9.22□□□□□ -0.93
COL1A1-213ENST00000511732 LINC01546A6NGU7 62 aa9.21□□□□□ -0.94
COL1A1-213ENST00000511732 SCGB3A1Q96QR1 104 aa9.21□□□□□ -0.94
COL1A1-213ENST00000511732 C22orf24Q9Y442 160 aa9.21□□□□□ -0.94
COL1A1-213ENST00000511732 SMIM1B2RUZ4 78 aa9.2□□□□□ -0.94
COL1A1-213ENST00000511732 SEC11CQ9BY50 192 aa9.2□□□□□ -0.94
COL1A1-213ENST00000511732 GNB1LQ9BYB4 327 aa9.2□□□□□ -0.94
COL1A1-213ENST00000511732 F8VRH5 84 aa9.19□□□□□ -0.94
COL1A1-213ENST00000511732 IGLV5-45A0A087WSX0 123 aa9.18□□□□□ -0.94
COL1A1-213ENST00000511732 TINCRA0A1B0GVN0 87 aa9.18□□□□□ -0.94
COL1A1-213ENST00000511732 IGLV1-50A0A075B6I6 118 aa9.17□□□□□ -0.94
COL1A1-213ENST00000511732 CST9LQ9H4G1 147 aa9.17□□□□□ -0.94
COL1A1-213ENST00000511732 ZNF861PO60384 105 aa9.16□□□□□ -0.94
COL1A1-213ENST00000511732 S100PP25815 95 aa9.16□□□□□ -0.94
COL1A1-213ENST00000511732 CXCL5P42830 114 aa9.16□□□□□ -0.94
COL1A1-213ENST00000511732 PDZD11Q5EBL8 140 aa9.16□□□□□ -0.94
COL1A1-213ENST00000511732 COX7B2Q8TF08 81 aa9.16□□□□□ -0.94
COL1A1-213ENST00000511732 SPINK8P0C7L1 97 aa9.15□□□□□ -0.94
COL1A1-213ENST00000511732 MRPL18Q9H0U6 180 aaKnown RBP9.15□□□□□ -0.94
COL1A1-213ENST00000511732 NUPR1O60356 82 aa9.14□□□□□ -0.95
COL1A1-213ENST00000511732 PMVKQ15126 192 aa9.14□□□□□ -0.95
COL1A1-213ENST00000511732 LBHQ53QV2 105 aaPredicted RBP9.14□□□□□ -0.95
COL1A1-213ENST00000511732 C10orf91Q5T1B1 145 aa9.14□□□□□ -0.95
COL1A1-213ENST00000511732 MRPL55Q7Z7F7 128 aaKnown RBP9.14□□□□□ -0.95
COL1A1-213ENST00000511732 COMMD7Q86VX2 200 aa9.14□□□□□ -0.95
COL1A1-213ENST00000511732 TP73-AS1Q9UF72 201 aa9.14□□□□□ -0.95
COL1A1-213ENST00000511732 LINC01549A6NIU2 74 aa9.13□□□□□ -0.95
COL1A1-213ENST00000511732 FABP9Q0Z7S8 132 aa9.13□□□□□ -0.95
COL1A1-213ENST00000511732 COX19Q49B96 90 aa9.13□□□□□ -0.95
COL1A1-213ENST00000511732 A0A096LNJ9 63 aa9.12□□□□□ -0.95
COL1A1-213ENST00000511732 FA2HQ7L5A8 372 aa9.12□□□□□ -0.95
COL1A1-213ENST00000511732 URB1-AS1Q96HZ7 61 aa9.12□□□□□ -0.95
COL1A1-213ENST00000511732 LINC00167Q96N53 147 aa9.12□□□□□ -0.95
COL1A1-213ENST00000511732 RAB5BP61020 215 aa9.11□□□□□ -0.95
COL1A1-213ENST00000511732 RPS10P5Q9NQ39 176 aa9.11□□□□□ -0.95
COL1A1-213ENST00000511732 SMCO4Q9NRQ5 59 aa9.11□□□□□ -0.95
COL1A1-213ENST00000511732 RPL37AP8A6NKH3 93 aa9.1□□□□□ -0.95
COL1A1-213ENST00000511732 CARHSP1Q9Y2V2 147 aaKnown RBP9.1□□□□□ -0.95
COL1A1-213ENST00000511732 BCE1O60756 84 aa9.09□□□□□ -0.95
COL1A1-213ENST00000511732 IGLC3P0DOY3 106 aa9.09□□□□□ -0.95
COL1A1-213ENST00000511732 RPL13AP40429 203 aaKnown RBP9.09□□□□□ -0.95
COL1A1-213ENST00000511732 RHEBQ15382 184 aa9.09□□□□□ -0.95
COL1A1-213ENST00000511732 GAGE10A6NGK3 116 aa9.08□□□□□ -0.96
COL1A1-213ENST00000511732 C18orf32Q8TCD1 76 aa9.08□□□□□ -0.96
COL1A1-213ENST00000511732 IGLV5-37A0A075B6J1 123 aa9.07□□□□□ -0.96
COL1A1-213ENST00000511732 A0A087X002 238 aa9.07□□□□□ -0.96
COL1A1-213ENST00000511732 IGLV5-39A0A0G2JS06 123 aa9.07□□□□□ -0.96
COL1A1-213ENST00000511732 H3BRM9 83 aa9.06□□□□□ -0.96
COL1A1-213ENST00000511732 SCO1O75880 301 aa9.06□□□□□ -0.96
COL1A1-213ENST00000511732 LINC00614P0C842 121 aa9.06□□□□□ -0.96
COL1A1-213ENST00000511732 ZNF22P17026 224 aaPredicted RBP9.06□□□□□ -0.96
COL1A1-213ENST00000511732 PMCHL1Q16048 86 aa9.06□□□□□ -0.96
COL1A1-213ENST00000511732 TRAPPC1Q9Y5R8 145 aa9.06□□□□□ -0.96
COL1A1-213ENST00000511732 ATP5LO75964 103 aa9.05□□□□□ -0.96
COL1A1-213ENST00000511732 RPL28P46779 137 aaKnown RBP9.05□□□□□ -0.96
COL1A1-213ENST00000511732 NDUFA6P56556 154 aa9.05□□□□□ -0.96
COL1A1-213ENST00000511732 HBDP02042 147 aa9.04□□□□□ -0.96
COL1A1-213ENST00000511732 PFN2P35080 140 aa9.04□□□□□ -0.96
COL1A1-213ENST00000511732 KRTAP13-1Q8IUC0 172 aa9.04□□□□□ -0.96
COL1A1-213ENST00000511732 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
COL1A1-213ENST00000511732 PRR4Q16378 134 aa9.02□□□□□ -0.97
COL1A1-213ENST00000511732 NKAPP1Q8N9T2 125 aa9.02□□□□□ -0.97
COL1A1-213ENST00000511732 IGKV2-28A0A075B6P5 120 aa9.01□□□□□ -0.97
COL1A1-213ENST00000511732 C11orf86A6NJI1 115 aa9.01□□□□□ -0.97
COL1A1-213ENST00000511732 TSPAN13O95857 204 aa9.01□□□□□ -0.97
COL1A1-213ENST00000511732 IGKV2D-28P01615 120 aa9.01□□□□□ -0.97
COL1A1-213ENST00000511732 VPREB1P12018 145 aa9.01□□□□□ -0.97
COL1A1-213ENST00000511732 SND1-IT1Q9HBX3 110 aa9.01□□□□□ -0.97
COL1A1-213ENST00000511732 ERG28Q9UKR5 140 aa9.01□□□□□ -0.97
COL1A1-213ENST00000511732 BAGE3Q86Y29 109 aa9□□□□□ -0.97
COL1A1-213ENST00000511732 Q8NDZ9 215 aa9□□□□□ -0.97
COL1A1-213ENST00000511732 ZNF625Q96I27 306 aaPredicted RBP9□□□□□ -0.97
COL1A1-213ENST00000511732 APOC3P02656 99 aa8.99□□□□□ -0.97
COL1A1-213ENST00000511732 CRYGAP11844 174 aa8.99□□□□□ -0.97
COL1A1-213ENST00000511732 KRTAP13-2Q52LG2 175 aa8.99□□□□□ -0.97
COL1A1-213ENST00000511732 UBE2AP49459 152 aa8.98□□□□□ -0.97
COL1A1-213ENST00000511732 TMEM170BQ5T4T1 132 aa8.98□□□□□ -0.97
COL1A1-213ENST00000511732 TYMSOSQ8TAI1 123 aa8.98□□□□□ -0.97
COL1A1-213ENST00000511732 TMEM238C9JI98 176 aa8.97□□□□□ -0.97
COL1A1-213ENST00000511732 PRLHP81277 87 aa8.97□□□□□ -0.97
COL1A1-213ENST00000511732 COX17Q14061 63 aa8.97□□□□□ -0.97
COL1A1-213ENST00000511732 YPEL4Q96NS1 127 aa8.96□□□□□ -0.98
COL1A1-213ENST00000511732 SNAPINO95295 136 aa8.95□□□□□ -0.98
COL1A1-213ENST00000511732 TMEM126AQ9H061 195 aa8.95□□□□□ -0.98
COL1A1-213ENST00000511732 CHTOPQ9Y3Y2 248 aaKnown RBP8.95□□□□□ -0.98
COL1A1-213ENST00000511732 M0R378 163 aa8.94□□□□□ -0.98
COL1A1-213ENST00000511732 RPL24P83731 157 aaKnown RBP8.94□□□□□ -0.98
COL1A1-213ENST00000511732 FAM19A1Q7Z5A9 133 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms