RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 PRADC1Q9BSG0 188 aa3.56□□□□□ -1.84
GYPB-212ENST00000511198 CELA1Q9UNI1 258 aa3.56□□□□□ -1.84
GYPB-212ENST00000511198 UFC1Q9Y3C8 167 aa3.56□□□□□ -1.84
GYPB-212ENST00000511198 C11orf86A6NJI1 115 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 K7EQD1 137 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 MT-ATP8P03928 68 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 TRGV3P03979 118 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 PSMB2P49721 201 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 ATP5G2Q06055 141 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 SRSF9Q13242 221 aaKnown RBP eCLIP3.55□□□□□ -1.84
GYPB-212ENST00000511198 MRPL23Q16540 153 aaKnown RBP3.55□□□□□ -1.84
GYPB-212ENST00000511198 KRTAP13-3Q3SY46 172 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 SCGB1D4Q6XE38 83 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 Q6ZRN7 208 aaPredicted RBP3.55□□□□□ -1.84
GYPB-212ENST00000511198 TMEM61Q8N0U2 210 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 C10orf126Q8N4M7 172 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 BAALCQ8WXS3 180 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 TMEM141Q96I45 108 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 ANAPC13Q9BS18 74 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 DPH3P1Q9H4G8 78 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
GYPB-212ENST00000511198 IGHV7-81A0A0B4J1V7 117 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 A0A0B4J2C4 111 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 LOC107984156A0A0G2JMH3 177 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 TRBV7-9A0A0J9YWB2 115 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 A0A0J9YY99 117 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 KLLNB2CW77 178 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 NXPH4O95158 308 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 CTSGP08311 255 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 C2orf66Q6UXQ4 117 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 ARL17AQ8IVW1 177 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 ANKRD29Q8N6D5 301 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 DYNLRB2Q8TF09 96 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 CARD19Q96LW7 228 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 TIMM17AQ99595 171 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 SPANXDQ9BXN6 97 aa3.54□□□□□ -1.84
GYPB-212ENST00000511198 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.53□□□□□ -1.84
GYPB-212ENST00000511198 TRAV21A0A0B4J279 112 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 A0A0J9YX75 114 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 H3BVH4 76 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 SLC25A20O43772 301 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 SNCGO76070 127 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 TCL1BO95988 128 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 IGHV3-30P01768 117 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 SCGB1C2P0DMR2 95 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 IGHV3-30-5P0DP03 117 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 RPL13AP40429 203 aaKnown RBP3.53□□□□□ -1.84
GYPB-212ENST00000511198 NDPQ00604 133 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 PMVKQ15126 192 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 ECSCRQ19T08 205 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 APRG1Q8IVJ8 170 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 SLC25A29Q8N8R3 303 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 EEF1AKMT3Q96AZ1 226 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 LINC00477Q96M19 166 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 METTL26Q96S19 204 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 AGPAT4-IT1Q9H0P7 198 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 PRO1854Q9UHT4 67 aa3.53□□□□□ -1.84
GYPB-212ENST00000511198 NEBP20929 6669 aa3.52□□□□□ -1.85
GYPB-212ENST00000511198 IGLV4-69A0A075B6H9 119 aa3.52□□□□□ -1.85
GYPB-212ENST00000511198 IGLV4-3A0A075B6K6 122 aa3.52□□□□□ -1.85
GYPB-212ENST00000511198 TRBV7-1A0A0A6YYK4 115 aa3.52□□□□□ -1.85
GYPB-212ENST00000511198 TRAV8-2A0A0B4J237 113 aa3.52□□□□□ -1.85
GYPB-212ENST00000511198 TRAV26-2A0A0B4J265 109 aa3.52□□□□□ -1.85
GYPB-212ENST00000511198 SDHAF1A6NFY7 115 aa3.52□□□□□ -1.85
GYPB-212ENST00000511198 ATXN8Q156A1 80 aa3.52□□□□□ -1.85
GYPB-212ENST00000511198 PLEKHB2Q96CS7 222 aa3.52□□□□□ -1.85
GYPB-212ENST00000511198 CHCHD5Q9BSY4 110 aa3.52□□□□□ -1.85
GYPB-212ENST00000511198 S4R3C0 116 aa3.52□□□□□ -1.85
GYPB-212ENST00000511198 FCGBPQ9Y6R7 5405 aaPredicted RBP3.52□□□□□ -1.85
GYPB-212ENST00000511198 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
GYPB-212ENST00000511198 TRBV6-5A0A0K0K1A5 114 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 FAM240AA0A1B0GVK7 77 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 IGIPA6NJ69 53 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 H3BT86 120 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 LEPROTO15243 131 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 IGHV3-33P01772 117 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 CRYGDP07320 174 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 MGPP08493 103 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 IFITM1P13164 125 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 LGALS3P17931 250 aaKnown RBP3.51□□□□□ -1.85
GYPB-212ENST00000511198 S100A4P26447 101 aaKnown RBP3.51□□□□□ -1.85
GYPB-212ENST00000511198 NDUFV3P56181 108 aaKnown RBP3.51□□□□□ -1.85
GYPB-212ENST00000511198 RHOHQ15669 191 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 ZFP2Q6ZN57 461 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 RNF182Q8N6D2 247 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 ZFAND2AQ8N6M9 145 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 OR10J6PQ8NGY7 276 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 FAM19A4Q96LR4 140 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 PHLDA3Q9Y5J5 127 aa3.51□□□□□ -1.85
GYPB-212ENST00000511198 A0A087WTM6 91 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 TRAV8-4A0A0B4J246 113 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 IGHV3-38A0A0C4DH36 116 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 TRBV30A0A0K0K1B3 111 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 TRBV10-2A0A0K0K1G8 114 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 FAM223BA6NKX1 122 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 C9JAW5 83 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 H3BMM0 161 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 J3QQQ9 107 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms