RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CDKN2A-AS1Q9UH64 79 aa9.3□□□□□ -0.92
RAB40C-202ENST00000509637 Q6ZN92 141 aa9.29□□□□□ -0.92
RAB40C-202ENST00000509637 Q8N8P6 123 aa9.29□□□□□ -0.92
RAB40C-202ENST00000509637 NUPR1O60356 82 aa9.28□□□□□ -0.92
RAB40C-202ENST00000509637 S100A8P05109 93 aa9.28□□□□□ -0.92
RAB40C-202ENST00000509637 Q8IZM0 81 aa9.28□□□□□ -0.92
RAB40C-202ENST00000509637 MUC17Q685J3 4493 aa9.28□□□□□ -0.92
RAB40C-202ENST00000509637 RPL37AP8A6NKH3 93 aa9.27□□□□□ -0.93
RAB40C-202ENST00000509637 C6orf226Q5I0X4 101 aa9.27□□□□□ -0.93
RAB40C-202ENST00000509637 KRTAP13-1Q8IUC0 172 aa9.27□□□□□ -0.93
RAB40C-202ENST00000509637 LINC00167Q96N53 147 aa9.27□□□□□ -0.93
RAB40C-202ENST00000509637 RETNLBQ9BQ08 111 aa9.27□□□□□ -0.93
RAB40C-202ENST00000509637 ALKBH7Q9BT30 221 aaPredicted RBP9.27□□□□□ -0.93
RAB40C-202ENST00000509637 BCE1O60756 84 aa9.26□□□□□ -0.93
RAB40C-202ENST00000509637 ATP5L2Q7Z4Y8 100 aa9.26□□□□□ -0.93
RAB40C-202ENST00000509637 MRPL55Q7Z7F7 128 aaKnown RBP9.26□□□□□ -0.93
RAB40C-202ENST00000509637 VCX2Q9H322 139 aa9.26□□□□□ -0.93
RAB40C-202ENST00000509637 CYSLTR1Q9Y271 337 aa9.26□□□□□ -0.93
RAB40C-202ENST00000509637 CKS1BP61024 79 aa9.25□□□□□ -0.93
RAB40C-202ENST00000509637 NDUFA5Q16718 116 aa9.25□□□□□ -0.93
RAB40C-202ENST00000509637 C10orf91Q5T1B1 145 aa9.25□□□□□ -0.93
RAB40C-202ENST00000509637 TYMSOSQ8TAI1 123 aa9.25□□□□□ -0.93
RAB40C-202ENST00000509637 MAP1LC3AQ9H492 121 aa9.25□□□□□ -0.93
RAB40C-202ENST00000509637 TP73-AS1Q9UF72 201 aa9.25□□□□□ -0.93
RAB40C-202ENST00000509637 SCO1O75880 301 aa9.24□□□□□ -0.93
RAB40C-202ENST00000509637 PRSS2P07478 247 aa9.24□□□□□ -0.93
RAB40C-202ENST00000509637 LBHQ53QV2 105 aaPredicted RBP9.24□□□□□ -0.93
RAB40C-202ENST00000509637 C2orf88Q9BSF0 95 aa9.24□□□□□ -0.93
RAB40C-202ENST00000509637 GAGE10A6NGK3 116 aa9.23□□□□□ -0.93
RAB40C-202ENST00000509637 SMIM1B2RUZ4 78 aa9.22□□□□□ -0.93
RAB40C-202ENST00000509637 F8VRH5 84 aa9.22□□□□□ -0.93
RAB40C-202ENST00000509637 CRYGAP11844 174 aa9.22□□□□□ -0.93
RAB40C-202ENST00000509637 RHEBQ15382 184 aa9.22□□□□□ -0.93
RAB40C-202ENST00000509637 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
RAB40C-202ENST00000509637 APOC3P02656 99 aa9.21□□□□□ -0.94
RAB40C-202ENST00000509637 RPL28P46779 137 aaKnown RBP9.21□□□□□ -0.94
RAB40C-202ENST00000509637 SVBPQ8N300 66 aa9.21□□□□□ -0.94
RAB40C-202ENST00000509637 IGLV5-37A0A075B6J1 123 aa9.19□□□□□ -0.94
RAB40C-202ENST00000509637 KRTAP9-6A0A140TA67 174 aa9.19□□□□□ -0.94
RAB40C-202ENST00000509637 SNAPINO95295 136 aa9.19□□□□□ -0.94
RAB40C-202ENST00000509637 NPSP0C0P6 89 aa9.19□□□□□ -0.94
RAB40C-202ENST00000509637 S100PP25815 95 aa9.19□□□□□ -0.94
RAB40C-202ENST00000509637 HERVK_113P63121 156 aa9.19□□□□□ -0.94
RAB40C-202ENST00000509637 ORMDL2Q53FV1 153 aa9.19□□□□□ -0.94
RAB40C-202ENST00000509637 TOMM6Q96B49 74 aa9.19□□□□□ -0.94
RAB40C-202ENST00000509637 RPS10P5Q9NQ39 176 aa9.19□□□□□ -0.94
RAB40C-202ENST00000509637 A0A0U1RQV1 116 aa9.18□□□□□ -0.94
RAB40C-202ENST00000509637 KIAA1644Q3SXP7 199 aa9.18□□□□□ -0.94
RAB40C-202ENST00000509637 SLC7A5P1Q8MH63 180 aa9.18□□□□□ -0.94
RAB40C-202ENST00000509637 TRAV9-1A0A075B6T8 112 aa9.17□□□□□ -0.94
RAB40C-202ENST00000509637 IGLV5-45A0A087WSX0 123 aa9.17□□□□□ -0.94
RAB40C-202ENST00000509637 RAB5BP61020 215 aa9.17□□□□□ -0.94
RAB40C-202ENST00000509637 Q8NDZ9 215 aa9.17□□□□□ -0.94
RAB40C-202ENST00000509637 TIMM17AQ99595 171 aa9.17□□□□□ -0.94
RAB40C-202ENST00000509637 COX7B2Q8TF08 81 aa9.16□□□□□ -0.94
RAB40C-202ENST00000509637 GEMIN7Q9H840 131 aaKnown RBP9.16□□□□□ -0.94
RAB40C-202ENST00000509637 SPINK8P0C7L1 97 aa9.15□□□□□ -0.94
RAB40C-202ENST00000509637 K7EMI3 77 aa9.14□□□□□ -0.95
RAB40C-202ENST00000509637 PRLHP81277 87 aa9.14□□□□□ -0.95
RAB40C-202ENST00000509637 PDZD11Q5EBL8 140 aa9.14□□□□□ -0.95
RAB40C-202ENST00000509637 LINC00304Q8N9R0 145 aa9.14□□□□□ -0.95
RAB40C-202ENST00000509637 NXT2Q9NPJ8 142 aaKnown RBP9.14□□□□□ -0.95
RAB40C-202ENST00000509637 IGKV2-28A0A075B6P5 120 aa9.13□□□□□ -0.95
RAB40C-202ENST00000509637 TINCRA0A1B0GVN0 87 aa9.13□□□□□ -0.95
RAB40C-202ENST00000509637 IGKV2D-28P01615 120 aa9.13□□□□□ -0.95
RAB40C-202ENST00000509637 CXCL5P42830 114 aa9.13□□□□□ -0.95
RAB40C-202ENST00000509637 SEC11AP67812 179 aa9.13□□□□□ -0.95
RAB40C-202ENST00000509637 ERASQ7Z444 233 aa9.13□□□□□ -0.95
RAB40C-202ENST00000509637 C3orf22Q8N5N4 141 aa9.13□□□□□ -0.95
RAB40C-202ENST00000509637 IGLV7-46A0A075B6I9 117 aa9.12□□□□□ -0.95
RAB40C-202ENST00000509637 TMEM238C9JI98 176 aa9.12□□□□□ -0.95
RAB40C-202ENST00000509637 TPRXLQ17RH7 258 aa9.12□□□□□ -0.95
RAB40C-202ENST00000509637 FAM229BQ4G0N7 80 aa9.12□□□□□ -0.95
RAB40C-202ENST00000509637 SCGB3A1Q96QR1 104 aa9.12□□□□□ -0.95
RAB40C-202ENST00000509637 CST9LQ9H4G1 147 aa9.12□□□□□ -0.95
RAB40C-202ENST00000509637 VPREB1P12018 145 aa9.11□□□□□ -0.95
RAB40C-202ENST00000509637 UBE2AP49459 152 aa9.11□□□□□ -0.95
RAB40C-202ENST00000509637 COX19Q49B96 90 aa9.11□□□□□ -0.95
RAB40C-202ENST00000509637 LINC01546A6NGU7 62 aa9.1□□□□□ -0.95
RAB40C-202ENST00000509637 KRTAP4-1Q9BYQ7 146 aa9.1□□□□□ -0.95
RAB40C-202ENST00000509637 M0R378 163 aa9.09□□□□□ -0.95
RAB40C-202ENST00000509637 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
RAB40C-202ENST00000509637 PLEKHB2Q96CS7 222 aa9.09□□□□□ -0.95
RAB40C-202ENST00000509637 CDIP1Q9H305 208 aa9.09□□□□□ -0.95
RAB40C-202ENST00000509637 GNB1LQ9BYB4 327 aa9.08□□□□□ -0.96
RAB40C-202ENST00000509637 NKAPP1Q8N9T2 125 aa9.07□□□□□ -0.96
RAB40C-202ENST00000509637 TMEM126AQ9H061 195 aa9.07□□□□□ -0.96
RAB40C-202ENST00000509637 SND1-IT1Q9HBX3 110 aa9.07□□□□□ -0.96
RAB40C-202ENST00000509637 IGLV5-39A0A0G2JS06 123 aa9.06□□□□□ -0.96
RAB40C-202ENST00000509637 PFN2P35080 140 aa9.06□□□□□ -0.96
RAB40C-202ENST00000509637 SMCO4Q9NRQ5 59 aa9.06□□□□□ -0.96
RAB40C-202ENST00000509637 IGKV2D-26A0A0A0MRZ7 120 aa9.05□□□□□ -0.96
RAB40C-202ENST00000509637 FAM19A1Q7Z5A9 133 aa9.05□□□□□ -0.96
RAB40C-202ENST00000509637 PPDPFQ9H3Y8 114 aa9.05□□□□□ -0.96
RAB40C-202ENST00000509637 A0A096LNJ9 63 aa9.04□□□□□ -0.96
RAB40C-202ENST00000509637 PMVKQ15126 192 aa9.04□□□□□ -0.96
RAB40C-202ENST00000509637 IGLC3P0DOY3 106 aa9.02□□□□□ -0.97
RAB40C-202ENST00000509637 ZNF22P17026 224 aaPredicted RBP9.02□□□□□ -0.97
RAB40C-202ENST00000509637 G0S2P27469 103 aa9.02□□□□□ -0.97
RAB40C-202ENST00000509637 FABP9Q0Z7S8 132 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms