RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 C1orf137Q5JT78 98 aa6.71□□□□□ -1.34
TUSC3-208ENST00000509177 LINC00173Q6ZV60 143 aa6.71□□□□□ -1.34
TUSC3-208ENST00000509177 FAM19A5Q7Z5A7 132 aaPredicted RBP6.71□□□□□ -1.34
TUSC3-208ENST00000509177 LINC01561Q8N1V8 128 aa6.71□□□□□ -1.34
TUSC3-208ENST00000509177 TOMM6Q96B49 74 aa6.71□□□□□ -1.34
TUSC3-208ENST00000509177 SCGB3A1Q96QR1 104 aa6.71□□□□□ -1.34
TUSC3-208ENST00000509177 GNB1LQ9BYB4 327 aa6.71□□□□□ -1.34
TUSC3-208ENST00000509177 PSORS1C2Q9UIG4 136 aa6.71□□□□□ -1.34
TUSC3-208ENST00000509177 FAM168BA1KXE4 195 aa6.7□□□□□ -1.34
TUSC3-208ENST00000509177 HERVK_113P63121 156 aa6.7□□□□□ -1.34
TUSC3-208ENST00000509177 FABP9Q0Z7S8 132 aa6.7□□□□□ -1.34
TUSC3-208ENST00000509177 COX19Q49B96 90 aa6.7□□□□□ -1.34
TUSC3-208ENST00000509177 LINC01600Q96MT4 127 aa6.7□□□□□ -1.34
TUSC3-208ENST00000509177 TIMM17AQ99595 171 aa6.7□□□□□ -1.34
TUSC3-208ENST00000509177 ALKBH7Q9BT30 221 aaPredicted RBP6.7□□□□□ -1.34
TUSC3-208ENST00000509177 RPS10P5Q9NQ39 176 aa6.7□□□□□ -1.34
TUSC3-208ENST00000509177 NDUFC2-KCTD14E9PQ53 114 aa6.69□□□□□ -1.34
TUSC3-208ENST00000509177 FA2HQ7L5A8 372 aa6.69□□□□□ -1.34
TUSC3-208ENST00000509177 ERASQ7Z444 233 aa6.69□□□□□ -1.34
TUSC3-208ENST00000509177 SMCO4Q9NRQ5 59 aa6.69□□□□□ -1.34
TUSC3-208ENST00000509177 LINC01549A6NIU2 74 aa6.68□□□□□ -1.34
TUSC3-208ENST00000509177 UBE2BP63146 152 aa6.68□□□□□ -1.34
TUSC3-208ENST00000509177 SRSF9Q13242 221 aaKnown RBP eCLIP6.68□□□□□ -1.34
TUSC3-208ENST00000509177 LINC00469Q8N7U9 141 aa6.68□□□□□ -1.34
TUSC3-208ENST00000509177 CDKN2A-AS1Q9UH64 79 aa6.68□□□□□ -1.34
TUSC3-208ENST00000509177 M0QXV9 152 aa6.67□□□□□ -1.34
TUSC3-208ENST00000509177 RHEBQ15382 184 aa6.67□□□□□ -1.34
TUSC3-208ENST00000509177 FAM19A3Q7Z5A8 133 aa6.67□□□□□ -1.34
TUSC3-208ENST00000509177 Q8IZM0 81 aa6.67□□□□□ -1.34
TUSC3-208ENST00000509177 CST9LQ9H4G1 147 aa6.65□□□□□ -1.34
TUSC3-208ENST00000509177 CARHSP1Q9Y2V2 147 aaKnown RBP6.65□□□□□ -1.34
TUSC3-208ENST00000509177 TINCRA0A1B0GVN0 87 aa6.64□□□□□ -1.35
TUSC3-208ENST00000509177 F8VRH5 84 aa6.64□□□□□ -1.35
TUSC3-208ENST00000509177 IGLV7-43P04211 117 aa6.64□□□□□ -1.35
TUSC3-208ENST00000509177 NDUFA6P56556 154 aa6.64□□□□□ -1.35
TUSC3-208ENST00000509177 PMVKQ15126 192 aa6.64□□□□□ -1.35
TUSC3-208ENST00000509177 C9orf129Q5T035 196 aaKnown RBP6.64□□□□□ -1.35
TUSC3-208ENST00000509177 C10orf91Q5T1B1 145 aa6.64□□□□□ -1.35
TUSC3-208ENST00000509177 DIRC1Q969H9 104 aa6.64□□□□□ -1.35
TUSC3-208ENST00000509177 XAGE1AQ9HD64 81 aa6.64□□□□□ -1.35
TUSC3-208ENST00000509177 TRAPPC1Q9Y5R8 145 aa6.64□□□□□ -1.35
TUSC3-208ENST00000509177 LINC01546A6NGU7 62 aa6.63□□□□□ -1.35
TUSC3-208ENST00000509177 APOC3P02656 99 aa6.63□□□□□ -1.35
TUSC3-208ENST00000509177 LPAP08519 4548 aa6.63□□□□□ -1.35
TUSC3-208ENST00000509177 CXCL5P42830 114 aa6.63□□□□□ -1.35
TUSC3-208ENST00000509177 NDUFA5Q16718 116 aa6.63□□□□□ -1.35
TUSC3-208ENST00000509177 PDZD11Q5EBL8 140 aa6.63□□□□□ -1.35
TUSC3-208ENST00000509177 COX7B2Q8TF08 81 aa6.63□□□□□ -1.35
TUSC3-208ENST00000509177 H3BRM9 83 aa6.62□□□□□ -1.35
TUSC3-208ENST00000509177 SPINK8P0C7L1 97 aa6.62□□□□□ -1.35
TUSC3-208ENST00000509177 KRTAP10-8P60410 259 aa6.62□□□□□ -1.35
TUSC3-208ENST00000509177 LBHQ53QV2 105 aaPredicted RBP6.62□□□□□ -1.35
TUSC3-208ENST00000509177 KRTAP11-1Q8IUC1 163 aa6.62□□□□□ -1.35
TUSC3-208ENST00000509177 KRTAP7-1Q8IUC3 87 aa6.62□□□□□ -1.35
TUSC3-208ENST00000509177 SMIM1B2RUZ4 78 aa6.61□□□□□ -1.35
TUSC3-208ENST00000509177 SNAPINO95295 136 aa6.61□□□□□ -1.35
TUSC3-208ENST00000509177 RAB5BP61020 215 aa6.61□□□□□ -1.35
TUSC3-208ENST00000509177 C21orf62-AS1Q17RA5 79 aa6.61□□□□□ -1.35
TUSC3-208ENST00000509177 C22orf24Q9Y442 160 aa6.61□□□□□ -1.35
TUSC3-208ENST00000509177 LINC00614P0C842 121 aa6.6□□□□□ -1.35
TUSC3-208ENST00000509177 SVBPQ8N300 66 aa6.6□□□□□ -1.35
TUSC3-208ENST00000509177 IGLV5-45A0A087WSX0 123 aa6.59□□□□□ -1.35
TUSC3-208ENST00000509177 H0Y9J4 135 aa6.59□□□□□ -1.35
TUSC3-208ENST00000509177 HBDP02042 147 aa6.59□□□□□ -1.35
TUSC3-208ENST00000509177 C18orf32Q8TCD1 76 aa6.59□□□□□ -1.35
TUSC3-208ENST00000509177 ATP5LO75964 103 aa6.58□□□□□ -1.36
TUSC3-208ENST00000509177 PMCHL1Q16048 86 aa6.58□□□□□ -1.36
TUSC3-208ENST00000509177 MUC2Q02817 5179 aa6.57□□□□□ -1.36
TUSC3-208ENST00000509177 NUPR1O60356 82 aa6.57□□□□□ -1.36
TUSC3-208ENST00000509177 MRPL55Q7Z7F7 128 aaKnown RBP6.57□□□□□ -1.36
TUSC3-208ENST00000509177 BAGE3Q86Y29 109 aa6.57□□□□□ -1.36
TUSC3-208ENST00000509177 PRR26Q8N8Z3 221 aa6.57□□□□□ -1.36
TUSC3-208ENST00000509177 IGLC3P0DOY3 106 aa6.56□□□□□ -1.36
TUSC3-208ENST00000509177 NKAPP1Q8N9T2 125 aa6.56□□□□□ -1.36
TUSC3-208ENST00000509177 TP73-AS1Q9UF72 201 aa6.56□□□□□ -1.36
TUSC3-208ENST00000509177 A0A096LNJ9 63 aa6.55□□□□□ -1.36
TUSC3-208ENST00000509177 RPL37AP8A6NKH3 93 aa6.55□□□□□ -1.36
TUSC3-208ENST00000509177 ZNF861PO60384 105 aa6.55□□□□□ -1.36
TUSC3-208ENST00000509177 PFN2P35080 140 aa6.55□□□□□ -1.36
TUSC3-208ENST00000509177 URB1-AS1Q96HZ7 61 aa6.55□□□□□ -1.36
TUSC3-208ENST00000509177 IGLV1-50A0A075B6I6 118 aa6.54□□□□□ -1.36
TUSC3-208ENST00000509177 GAGE10A6NGK3 116 aa6.54□□□□□ -1.36
TUSC3-208ENST00000509177 ZNF22P17026 224 aaPredicted RBP6.54□□□□□ -1.36
TUSC3-208ENST00000509177 TMEM170BQ5T4T1 132 aa6.54□□□□□ -1.36
TUSC3-208ENST00000509177 LINC00167Q96N53 147 aa6.54□□□□□ -1.36
TUSC3-208ENST00000509177 IGLV5-39A0A0G2JS06 123 aa6.53□□□□□ -1.36
TUSC3-208ENST00000509177 RPL28P46779 137 aaKnown RBP6.53□□□□□ -1.36
TUSC3-208ENST00000509177 CHTOPQ9Y3Y2 248 aaKnown RBP6.53□□□□□ -1.36
TUSC3-208ENST00000509177 C11orf86A6NJI1 115 aa6.52□□□□□ -1.37
TUSC3-208ENST00000509177 BCE1O60756 84 aa6.52□□□□□ -1.37
TUSC3-208ENST00000509177 ZNF625Q96I27 306 aaPredicted RBP6.52□□□□□ -1.37
TUSC3-208ENST00000509177 RPL13AP40429 203 aaKnown RBP6.51□□□□□ -1.37
TUSC3-208ENST00000509177 UBE2AP49459 152 aa6.51□□□□□ -1.37
TUSC3-208ENST00000509177 CHCHD1Q96BP2 118 aaKnown RBP6.51□□□□□ -1.37
TUSC3-208ENST00000509177 ERG28Q9UKR5 140 aa6.51□□□□□ -1.37
TUSC3-208ENST00000509177 IGLV5-37A0A075B6J1 123 aa6.5□□□□□ -1.37
TUSC3-208ENST00000509177 HSBP1O75506 76 aa6.5□□□□□ -1.37
TUSC3-208ENST00000509177 KRTAP1-4P0C5Y4 121 aa6.5□□□□□ -1.37
TUSC3-208ENST00000509177 SFTA2Q6UW10 78 aa6.5□□□□□ -1.37
TUSC3-208ENST00000509177 IFI27L1Q96BM0 104 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms