RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 MYO18BQ8IUG5 2567 aa6.99□□□□□ -1.29
PDGFRA-207ENST00000509092 C9orf66Q5T8R8 295 aa6.98□□□□□ -1.29
PDGFRA-207ENST00000509092 FLNCQ14315 2725 aa6.98□□□□□ -1.29
PDGFRA-207ENST00000509092 ZNF843Q8N446 348 aa6.98□□□□□ -1.29
PDGFRA-207ENST00000509092 LINC01560Q8TB33 94 aa6.98□□□□□ -1.29
PDGFRA-207ENST00000509092 hDV103S1A0JD37 113 aa6.97□□□□□ -1.29
PDGFRA-207ENST00000509092 PRB1P04280 392 aa6.97□□□□□ -1.29
PDGFRA-207ENST00000509092 PRM2P04554 102 aa6.97□□□□□ -1.29
PDGFRA-207ENST00000509092 C11orf44Q8N8P7 122 aa6.97□□□□□ -1.29
PDGFRA-207ENST00000509092 GNLYP22749 145 aa6.96□□□□□ -1.3
PDGFRA-207ENST00000509092 SPTAN1Q13813 2472 aaKnown RBP6.95□□□□□ -1.3
PDGFRA-207ENST00000509092 UBE2L6O14933 153 aa6.95□□□□□ -1.3
PDGFRA-207ENST00000509092 ANKHD1Q8IWZ3 2542 aaKnown RBP6.95□□□□□ -1.3
PDGFRA-207ENST00000509092 LINC00575Q6W349 94 aa6.95□□□□□ -1.3
PDGFRA-207ENST00000509092 Q6ZRP5 223 aa6.95□□□□□ -1.3
PDGFRA-207ENST00000509092 USP9XQ93008 2570 aaPredicted RBP6.94□□□□□ -1.3
PDGFRA-207ENST00000509092 TMEM89A2RUT3 159 aa6.94□□□□□ -1.3
PDGFRA-207ENST00000509092 A8MTW9 85 aa6.94□□□□□ -1.3
PDGFRA-207ENST00000509092 IGLV1-40P01703 118 aa6.94□□□□□ -1.3
PDGFRA-207ENST00000509092 IGHV4-38-2P0DP08 117 aa6.94□□□□□ -1.3
PDGFRA-207ENST00000509092 ADORA2A-AS1P86434 159 aa6.94□□□□□ -1.3
PDGFRA-207ENST00000509092 SCXQ7RTU7 201 aa6.94□□□□□ -1.3
PDGFRA-207ENST00000509092 OCR1Q9BZK8 76 aa6.94□□□□□ -1.3
PDGFRA-207ENST00000509092 COL12A1Q99715 3063 aa6.94□□□□□ -1.3
PDGFRA-207ENST00000509092 IGHV3OR16-9A0A0B4J2B5 98 aa6.93□□□□□ -1.3
PDGFRA-207ENST00000509092 MRPL55Q7Z7F7 128 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-207ENST00000509092 H3BQ85 93 aa6.92□□□□□ -1.3
PDGFRA-207ENST00000509092 LMO4P61968 165 aa6.92□□□□□ -1.3
PDGFRA-207ENST00000509092 MUC7Q8TAX7 377 aa6.92□□□□□ -1.3
PDGFRA-207ENST00000509092 DCHS2Q6V1P9 2916 aa6.92□□□□□ -1.3
PDGFRA-207ENST00000509092 C6orf99Q4VX62 202 aa6.92□□□□□ -1.3
PDGFRA-207ENST00000509092 LRRK2Q5S007 2527 aa6.91□□□□□ -1.3
PDGFRA-207ENST00000509092 PRR3P79522 188 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-207ENST00000509092 C11orf71Q6IPW1 123 aa6.91□□□□□ -1.3
PDGFRA-207ENST00000509092 CD164L2Q6UWJ8 174 aa6.91□□□□□ -1.3
PDGFRA-207ENST00000509092 SPATA3Q8NHX4 192 aa6.91□□□□□ -1.3
PDGFRA-207ENST00000509092 HIGD2AQ9BW72 106 aa6.91□□□□□ -1.3
PDGFRA-207ENST00000509092 DOPEY1Q5JWR5 2465 aa6.91□□□□□ -1.3
PDGFRA-207ENST00000509092 SORL1Q92673 2214 aa6.9□□□□□ -1.3
PDGFRA-207ENST00000509092 UBR5O95071 2799 aaPredicted RBP6.9□□□□□ -1.3
PDGFRA-207ENST00000509092 IGKV3OR2-268A0A0C4DH90 116 aa6.9□□□□□ -1.31
PDGFRA-207ENST00000509092 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-207ENST00000509092 FBXL19-AS1Q494R0 122 aa6.89□□□□□ -1.31
PDGFRA-207ENST00000509092 IGKV4-1P06312 121 aa6.89□□□□□ -1.31
PDGFRA-207ENST00000509092 IGHV4-31P0DP07 118 aa6.89□□□□□ -1.31
PDGFRA-207ENST00000509092 C1orf64Q8NEQ6 169 aa6.89□□□□□ -1.31
PDGFRA-207ENST00000509092 TRAV22A0A0B4J277 110 aa6.88□□□□□ -1.31
PDGFRA-207ENST00000509092 PSPHP1O15172 72 aa6.88□□□□□ -1.31
PDGFRA-207ENST00000509092 LRCOL1A6NCL2 159 aa6.88□□□□□ -1.31
PDGFRA-207ENST00000509092 DEFB131AP59861 70 aa6.88□□□□□ -1.31
PDGFRA-207ENST00000509092 LY6EQ16553 131 aa6.88□□□□□ -1.31
PDGFRA-207ENST00000509092 UTP20O75691 2785 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-207ENST00000509092 KTN1-AS1Q86SY8 53 aa6.87□□□□□ -1.31
PDGFRA-207ENST00000509092 LRBAP50851 2863 aa6.87□□□□□ -1.31
PDGFRA-207ENST00000509092 C19orf84I3L1E1 186 aa6.87□□□□□ -1.31
PDGFRA-207ENST00000509092 Q8IZM0 81 aa6.87□□□□□ -1.31
PDGFRA-207ENST00000509092 RBM12B-AS1Q9P1G2 102 aa6.87□□□□□ -1.31
PDGFRA-207ENST00000509092 HELZ2Q9BYK8 2649 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-207ENST00000509092 HRNRQ86YZ3 2850 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-207ENST00000509092 TRGV1A0A0A0MS02 117 aa6.86□□□□□ -1.31
PDGFRA-207ENST00000509092 A6NDX4 124 aa6.86□□□□□ -1.31
PDGFRA-207ENST00000509092 INSP01308 110 aa6.86□□□□□ -1.31
PDGFRA-207ENST00000509092 IGLV4-60A0A075B6I1 120 aa6.86□□□□□ -1.31
PDGFRA-207ENST00000509092 LYRM9A8MSI8 78 aa6.86□□□□□ -1.31
PDGFRA-207ENST00000509092 UBE2BP63146 152 aa6.86□□□□□ -1.31
PDGFRA-207ENST00000509092 Q6ZQY7 126 aa6.86□□□□□ -1.31
PDGFRA-207ENST00000509092 COX17Q14061 63 aa6.85□□□□□ -1.31
PDGFRA-207ENST00000509092 Q8N9L7 120 aa6.85□□□□□ -1.31
PDGFRA-207ENST00000509092 LINC01356Q8N9X3 169 aa6.85□□□□□ -1.31
PDGFRA-207ENST00000509092 LINC01006Q8NI28 216 aa6.85□□□□□ -1.31
PDGFRA-207ENST00000509092 AKAP6Q13023 2319 aa6.84□□□□□ -1.31
PDGFRA-207ENST00000509092 TENM4Q6N022 2769 aa6.84□□□□□ -1.31
PDGFRA-207ENST00000509092 CRYBG3Q68DQ2 2970 aa6.84□□□□□ -1.31
PDGFRA-207ENST00000509092 LCE6AA0A183 80 aa6.84□□□□□ -1.31
PDGFRA-207ENST00000509092 SYCNQ0VAF6 134 aa6.84□□□□□ -1.31
PDGFRA-207ENST00000509092 BRD3OSQ6XYD6 125 aa6.84□□□□□ -1.31
PDGFRA-207ENST00000509092 LINC00588Q9Y4M8 146 aa6.84□□□□□ -1.31
PDGFRA-207ENST00000509092 H3BUX3 64 aa6.84□□□□□ -1.32
PDGFRA-207ENST00000509092 USP9YO00507 2555 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-207ENST00000509092 CENPEQ02224 2701 aa6.83□□□□□ -1.32
PDGFRA-207ENST00000509092 LINC00959A0A1B0GUT2 108 aa6.83□□□□□ -1.32
PDGFRA-207ENST00000509092 PLA2G2AP14555 144 aa6.83□□□□□ -1.32
PDGFRA-207ENST00000509092 COX7BP24311 80 aa6.82□□□□□ -1.32
PDGFRA-207ENST00000509092 CYP4F30PQ9H0H9 118 aa6.82□□□□□ -1.32
PDGFRA-207ENST00000509092 PSCAO43653 123 aa6.81□□□□□ -1.32
PDGFRA-207ENST00000509092 FASNP49327 2511 aaKnown RBP6.81□□□□□ -1.32
PDGFRA-207ENST00000509092 A8MUN3 132 aa6.81□□□□□ -1.32
PDGFRA-207ENST00000509092 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-207ENST00000509092 Q8NDZ9 215 aa6.81□□□□□ -1.32
PDGFRA-207ENST00000509092 TRGV2A0A075B6R0 118 aa6.8□□□□□ -1.32
PDGFRA-207ENST00000509092 ZCCHC13Q8WW36 166 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-207ENST00000509092 GCN1Q92616 2671 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-207ENST00000509092 M0R378 163 aa6.8□□□□□ -1.32
PDGFRA-207ENST00000509092 SPG11Q96JI7 2443 aa6.8□□□□□ -1.32
PDGFRA-207ENST00000509092 TRBV6-8A0A0A6YYG3 113 aa6.79□□□□□ -1.32
PDGFRA-207ENST00000509092 A8MU10 97 aa6.79□□□□□ -1.32
PDGFRA-207ENST00000509092 UBE2AP49459 152 aa6.79□□□□□ -1.32
PDGFRA-207ENST00000509092 DEFB114Q30KQ6 69 aa6.79□□□□□ -1.32
PDGFRA-207ENST00000509092 Q5VV11 94 aa6.79□□□□□ -1.32
PDGFRA-207ENST00000509092 SVEP1Q4LDE5 3571 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms