RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 H0Y9J4 135 aa7.88□□□□□ -1.15
HMGCS1-205ENST00000508319 NPSP0C0P6 89 aa7.88□□□□□ -1.15
HMGCS1-205ENST00000508319 CDIP1Q9H305 208 aa7.88□□□□□ -1.15
HMGCS1-205ENST00000508319 LPAP08519 4548 aa7.88□□□□□ -1.15
HMGCS1-205ENST00000508319 K7EMI3 77 aa7.87□□□□□ -1.15
HMGCS1-205ENST00000508319 FAM19A3Q7Z5A8 133 aa7.87□□□□□ -1.15
HMGCS1-205ENST00000508319 PRR26Q8N8Z3 221 aa7.87□□□□□ -1.15
HMGCS1-205ENST00000508319 PACRGQ96M98 296 aaPredicted RBP7.87□□□□□ -1.15
HMGCS1-205ENST00000508319 VCX2Q9H322 139 aa7.87□□□□□ -1.15
HMGCS1-205ENST00000508319 KRTAP1-4P0C5Y4 121 aa7.86□□□□□ -1.15
HMGCS1-205ENST00000508319 Q8IZM0 81 aa7.86□□□□□ -1.15
HMGCS1-205ENST00000508319 NXT2Q9NPJ8 142 aaKnown RBP7.86□□□□□ -1.15
HMGCS1-205ENST00000508319 RAB14P61106 215 aa7.85□□□□□ -1.15
HMGCS1-205ENST00000508319 UBE2BP63146 152 aa7.85□□□□□ -1.15
HMGCS1-205ENST00000508319 TOMM7Q9P0U1 55 aa7.85□□□□□ -1.15
HMGCS1-205ENST00000508319 PRSS2P07478 247 aa7.84□□□□□ -1.15
HMGCS1-205ENST00000508319 ADCYAP1P18509 176 aa7.84□□□□□ -1.15
HMGCS1-205ENST00000508319 HERVK_113P63121 156 aa7.84□□□□□ -1.15
HMGCS1-205ENST00000508319 TIMM17AQ99595 171 aa7.84□□□□□ -1.15
HMGCS1-205ENST00000508319 CTDSP1Q9GZU7 261 aa7.84□□□□□ -1.15
HMGCS1-205ENST00000508319 CDKN2A-AS1Q9UH64 79 aa7.84□□□□□ -1.15
HMGCS1-205ENST00000508319 CKS1BP61024 79 aa7.83□□□□□ -1.16
HMGCS1-205ENST00000508319 LINC00469Q8N7U9 141 aa7.83□□□□□ -1.16
HMGCS1-205ENST00000508319 TOMM6Q96B49 74 aa7.83□□□□□ -1.16
HMGCS1-205ENST00000508319 MRPL18Q9H0U6 180 aaKnown RBP7.83□□□□□ -1.16
HMGCS1-205ENST00000508319 KIAA1644Q3SXP7 199 aa7.82□□□□□ -1.16
HMGCS1-205ENST00000508319 C6orf226Q5I0X4 101 aa7.82□□□□□ -1.16
HMGCS1-205ENST00000508319 CLLU1Q5K131 121 aa7.82□□□□□ -1.16
HMGCS1-205ENST00000508319 PAPPA-AS1Q5QFB9 102 aa7.82□□□□□ -1.16
HMGCS1-205ENST00000508319 ALKBH7Q9BT30 221 aaPredicted RBP7.82□□□□□ -1.16
HMGCS1-205ENST00000508319 IGLV1-50A0A075B6I6 118 aa7.81□□□□□ -1.16
HMGCS1-205ENST00000508319 SEC11AP67812 179 aa7.81□□□□□ -1.16
HMGCS1-205ENST00000508319 XAGE1AQ9HD64 81 aa7.81□□□□□ -1.16
HMGCS1-205ENST00000508319 F8VRH5 84 aa7.8□□□□□ -1.16
HMGCS1-205ENST00000508319 G0S2P27469 103 aa7.8□□□□□ -1.16
HMGCS1-205ENST00000508319 GEMIN7Q9H840 131 aaKnown RBP7.8□□□□□ -1.16
HMGCS1-205ENST00000508319 TRAV9-1A0A075B6T8 112 aa7.79□□□□□ -1.16
HMGCS1-205ENST00000508319 SMIM1B2RUZ4 78 aa7.79□□□□□ -1.16
HMGCS1-205ENST00000508319 ERASQ7Z444 233 aa7.79□□□□□ -1.16
HMGCS1-205ENST00000508319 C22orf24Q9Y442 160 aa7.79□□□□□ -1.16
HMGCS1-205ENST00000508319 LINC01546A6NGU7 62 aa7.78□□□□□ -1.16
HMGCS1-205ENST00000508319 ZNF861PO60384 105 aa7.78□□□□□ -1.16
HMGCS1-205ENST00000508319 CXCL5P42830 114 aa7.78□□□□□ -1.16
HMGCS1-205ENST00000508319 SCGB3A1Q96QR1 104 aa7.78□□□□□ -1.16
HMGCS1-205ENST00000508319 KRTAP4-12Q9BQ66 201 aa7.78□□□□□ -1.16
HMGCS1-205ENST00000508319 IGLV5-45A0A087WSX0 123 aa7.77□□□□□ -1.17
HMGCS1-205ENST00000508319 TINCRA0A1B0GVN0 87 aa7.77□□□□□ -1.17
HMGCS1-205ENST00000508319 TMEM218A2RU14 115 aa7.77□□□□□ -1.17
HMGCS1-205ENST00000508319 NUPR1O60356 82 aa7.77□□□□□ -1.17
HMGCS1-205ENST00000508319 LCE3BQ5TA77 95 aa7.77□□□□□ -1.17
HMGCS1-205ENST00000508319 UQCC3Q6UW78 93 aa7.77□□□□□ -1.17
HMGCS1-205ENST00000508319 TP73-AS1Q9UF72 201 aa7.77□□□□□ -1.17
HMGCS1-205ENST00000508319 RPL13AP40429 203 aaKnown RBP7.76□□□□□ -1.17
HMGCS1-205ENST00000508319 PDZD11Q5EBL8 140 aa7.76□□□□□ -1.17
HMGCS1-205ENST00000508319 LBHQ53QV2 105 aaPredicted RBP7.75□□□□□ -1.17
HMGCS1-205ENST00000508319 MRPL55Q7Z7F7 128 aaKnown RBP7.75□□□□□ -1.17
HMGCS1-205ENST00000508319 COX7B2Q8TF08 81 aa7.75□□□□□ -1.17
HMGCS1-205ENST00000508319 GNB1LQ9BYB4 327 aa7.75□□□□□ -1.17
HMGCS1-205ENST00000508319 LINC01549A6NIU2 74 aa7.74□□□□□ -1.17
HMGCS1-205ENST00000508319 IFITM2Q01629 132 aa7.74□□□□□ -1.17
HMGCS1-205ENST00000508319 SEC11CQ9BY50 192 aa7.74□□□□□ -1.17
HMGCS1-205ENST00000508319 CST9LQ9H4G1 147 aa7.74□□□□□ -1.17
HMGCS1-205ENST00000508319 CARHSP1Q9Y2V2 147 aaKnown RBP7.74□□□□□ -1.17
HMGCS1-205ENST00000508319 BCE1O60756 84 aa7.73□□□□□ -1.17
HMGCS1-205ENST00000508319 SPINK8P0C7L1 97 aa7.73□□□□□ -1.17
HMGCS1-205ENST00000508319 S100PP25815 95 aa7.73□□□□□ -1.17
HMGCS1-205ENST00000508319 PMVKQ15126 192 aa7.72□□□□□ -1.17
HMGCS1-205ENST00000508319 MUC2Q02817 5179 aa7.72□□□□□ -1.17
HMGCS1-205ENST00000508319 FA2HQ7L5A8 372 aa7.71□□□□□ -1.18
HMGCS1-205ENST00000508319 LINC00167Q96N53 147 aa7.71□□□□□ -1.18
HMGCS1-205ENST00000508319 IGLV5-37A0A075B6J1 123 aa7.7□□□□□ -1.18
HMGCS1-205ENST00000508319 A0A087X002 238 aa7.7□□□□□ -1.18
HMGCS1-205ENST00000508319 A0A096LNJ9 63 aa7.7□□□□□ -1.18
HMGCS1-205ENST00000508319 RPL37AP8A6NKH3 93 aa7.7□□□□□ -1.18
HMGCS1-205ENST00000508319 RPL28P46779 137 aaKnown RBP7.7□□□□□ -1.18
HMGCS1-205ENST00000508319 COX19Q49B96 90 aa7.7□□□□□ -1.18
HMGCS1-205ENST00000508319 KRTAP9-9Q9BYP9 154 aa7.7□□□□□ -1.18
HMGCS1-205ENST00000508319 KRTAP9-4Q9BYQ2 154 aa7.7□□□□□ -1.18
HMGCS1-205ENST00000508319 IGLV5-39A0A0G2JS06 123 aa7.69□□□□□ -1.18
HMGCS1-205ENST00000508319 GAGE10A6NGK3 116 aa7.69□□□□□ -1.18
HMGCS1-205ENST00000508319 IGLC3P0DOY3 106 aa7.69□□□□□ -1.18
HMGCS1-205ENST00000508319 RAB5BP61020 215 aa7.69□□□□□ -1.18
HMGCS1-205ENST00000508319 C10orf91Q5T1B1 145 aa7.69□□□□□ -1.18
HMGCS1-205ENST00000508319 SMCO4Q9NRQ5 59 aa7.69□□□□□ -1.18
HMGCS1-205ENST00000508319 H3BRM9 83 aa7.68□□□□□ -1.18
HMGCS1-205ENST00000508319 FABP9Q0Z7S8 132 aa7.68□□□□□ -1.18
HMGCS1-205ENST00000508319 RHEBQ15382 184 aa7.68□□□□□ -1.18
HMGCS1-205ENST00000508319 PRR4Q16378 134 aa7.68□□□□□ -1.18
HMGCS1-205ENST00000508319 COMMD7Q86VX2 200 aa7.68□□□□□ -1.18
HMGCS1-205ENST00000508319 KRTAP13-1Q8IUC0 172 aa7.68□□□□□ -1.18
HMGCS1-205ENST00000508319 ATP5LO75964 103 aa7.67□□□□□ -1.18
HMGCS1-205ENST00000508319 URB1-AS1Q96HZ7 61 aa7.67□□□□□ -1.18
HMGCS1-205ENST00000508319 SCO1O75880 301 aa7.66□□□□□ -1.18
HMGCS1-205ENST00000508319 ZNF22P17026 224 aaPredicted RBP7.66□□□□□ -1.18
HMGCS1-205ENST00000508319 NKAPP1Q8N9T2 125 aa7.66□□□□□ -1.18
HMGCS1-205ENST00000508319 C18orf32Q8TCD1 76 aa7.66□□□□□ -1.18
HMGCS1-205ENST00000508319 CRYGAP11844 174 aa7.65□□□□□ -1.18
HMGCS1-205ENST00000508319 RPS10P5Q9NQ39 176 aa7.65□□□□□ -1.18
HMGCS1-205ENST00000508319 IGKV2-28A0A075B6P5 120 aa7.64□□□□□ -1.19
HMGCS1-205ENST00000508319 TSPAN13O95857 204 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms