RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 A0A087WVE0 104 aa9.34□□□□□ -0.91
SNCAIP-209ENST00000508017 LINC00959A0A1B0GUT2 108 aa9.34□□□□□ -0.91
SNCAIP-209ENST00000508017 SS18Q15532 418 aa9.34□□□□□ -0.91
SNCAIP-209ENST00000508017 DEFB113Q30KQ7 82 aa9.34□□□□□ -0.91
SNCAIP-209ENST00000508017 CYSTM1Q9H1C7 97 aa9.34□□□□□ -0.91
SNCAIP-209ENST00000508017 GCN1Q92616 2671 aaKnown RBP9.33□□□□□ -0.92
SNCAIP-209ENST00000508017 XCL1P47992 114 aa9.33□□□□□ -0.92
SNCAIP-209ENST00000508017 C6orf226Q5I0X4 101 aa9.33□□□□□ -0.92
SNCAIP-209ENST00000508017 ESM1Q9NQ30 184 aa9.33□□□□□ -0.92
SNCAIP-209ENST00000508017 C19orf73Q9NVV2 129 aa9.33□□□□□ -0.92
SNCAIP-209ENST00000508017 FLNAP21333 2647 aaKnown RBP9.33□□□□□ -0.92
SNCAIP-209ENST00000508017 NBEAL2Q6ZNJ1 2754 aa9.33□□□□□ -0.92
SNCAIP-209ENST00000508017 CLPSL2Q6UWE3 100 aa9.33□□□□□ -0.92
SNCAIP-209ENST00000508017 ATOX1O00244 68 aa9.32□□□□□ -0.92
SNCAIP-209ENST00000508017 PRR3P79522 188 aaKnown RBP9.32□□□□□ -0.92
SNCAIP-209ENST00000508017 Q6JHZ5 121 aa9.32□□□□□ -0.92
SNCAIP-209ENST00000508017 LOC107984640A0A0U1RRK4 108 aa9.32□□□□□ -0.92
SNCAIP-209ENST00000508017 hADV29S1A0JD25 119 aa9.31□□□□□ -0.92
SNCAIP-209ENST00000508017 LY6G6DO95868 133 aa9.31□□□□□ -0.92
SNCAIP-209ENST00000508017 RPL18AQ02543 176 aaKnown RBP9.31□□□□□ -0.92
SNCAIP-209ENST00000508017 DEFB130BP0DP73 79 aa9.31□□□□□ -0.92
SNCAIP-209ENST00000508017 DEFB130AP0DP74 79 aa9.31□□□□□ -0.92
SNCAIP-209ENST00000508017 KRTAP1-3Q8IUG1 177 aa9.31□□□□□ -0.92
SNCAIP-209ENST00000508017 A0A1B0GX51 115 aa9.3□□□□□ -0.92
SNCAIP-209ENST00000508017 ORMDL1Q9P0S3 153 aa9.3□□□□□ -0.92
SNCAIP-209ENST00000508017 CRYGAP11844 174 aa9.3□□□□□ -0.92
SNCAIP-209ENST00000508017 NANOS2P60321 138 aaKnown RBP9.3□□□□□ -0.92
SNCAIP-209ENST00000508017 LINC01561Q8N1V8 128 aa9.3□□□□□ -0.92
SNCAIP-209ENST00000508017 TMEM86BQ8N661 226 aa9.3□□□□□ -0.92
SNCAIP-209ENST00000508017 USP24Q9UPU5 2620 aa9.29□□□□□ -0.92
SNCAIP-209ENST00000508017 A0A096LPF7 62 aa9.28□□□□□ -0.92
SNCAIP-209ENST00000508017 IGLV1-51P01701 117 aa9.27□□□□□ -0.92
SNCAIP-209ENST00000508017 GYPEP15421 78 aa9.27□□□□□ -0.92
SNCAIP-209ENST00000508017 MTORP42345 2549 aa9.27□□□□□ -0.92
SNCAIP-209ENST00000508017 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
SNCAIP-209ENST00000508017 CCKP06307 115 aa9.26□□□□□ -0.93
SNCAIP-209ENST00000508017 Q8IZM0 81 aa9.26□□□□□ -0.93
SNCAIP-209ENST00000508017 USP17L23D6RBM5 183 aa9.25□□□□□ -0.93
SNCAIP-209ENST00000508017 CFAP161Q6P656 301 aa9.25□□□□□ -0.93
SNCAIP-209ENST00000508017 LINC00167Q96N53 147 aa9.25□□□□□ -0.93
SNCAIP-209ENST00000508017 ACANP16112 2415 aa9.25□□□□□ -0.93
SNCAIP-209ENST00000508017 HILS1P60008 231 aa9.25□□□□□ -0.93
SNCAIP-209ENST00000508017 Q8N814 137 aa9.25□□□□□ -0.93
SNCAIP-209ENST00000508017 WFDC9Q8NEX5 89 aa9.25□□□□□ -0.93
SNCAIP-209ENST00000508017 LINC01006Q8NI28 216 aa9.25□□□□□ -0.93
SNCAIP-209ENST00000508017 ANK3Q12955 4377 aaKnown RBP9.25□□□□□ -0.93
SNCAIP-209ENST00000508017 SERP2Q8N6R1 65 aa9.24□□□□□ -0.93
SNCAIP-209ENST00000508017 WFDC11Q8NEX6 87 aa9.24□□□□□ -0.93
SNCAIP-209ENST00000508017 C9orf116Q5BN46 136 aaPredicted RBP9.24□□□□□ -0.93
SNCAIP-209ENST00000508017 UPK3BQ9BT76 320 aa9.24□□□□□ -0.93
SNCAIP-209ENST00000508017 Q8N3U1 123 aa9.23□□□□□ -0.93
SNCAIP-209ENST00000508017 Q8NDZ9 215 aa9.23□□□□□ -0.93
SNCAIP-209ENST00000508017 BBC3Q96PG8 261 aaPredicted RBP9.23□□□□□ -0.93
SNCAIP-209ENST00000508017 J3KT08 172 aa9.22□□□□□ -0.93
SNCAIP-209ENST00000508017 KIAA0087Q14695 138 aa9.22□□□□□ -0.93
SNCAIP-209ENST00000508017 IGLV10-54A0A075B6I4 117 aa9.22□□□□□ -0.93
SNCAIP-209ENST00000508017 A0A1B0GUV1 79 aa9.22□□□□□ -0.93
SNCAIP-209ENST00000508017 RNASE1P07998 156 aaKnown RBP9.22□□□□□ -0.93
SNCAIP-209ENST00000508017 LINC00269Q8N2A0 174 aa9.21□□□□□ -0.93
SNCAIP-209ENST00000508017 KIR2DL5BQ8NHK3 375 aa9.21□□□□□ -0.93
SNCAIP-209ENST00000508017 JMJD7-PLA2G4BH0Y9G9 81 aa9.2□□□□□ -0.94
SNCAIP-209ENST00000508017 C6orf99Q4VX62 202 aa9.2□□□□□ -0.94
SNCAIP-209ENST00000508017 FAM19A5Q7Z5A7 132 aaPredicted RBP9.2□□□□□ -0.94
SNCAIP-209ENST00000508017 FAM19A1Q7Z5A9 133 aa9.2□□□□□ -0.94
SNCAIP-209ENST00000508017 LINC00612Q8N6U2 182 aa9.2□□□□□ -0.94
SNCAIP-209ENST00000508017 TMEM256-PLSCR3K7ERE1 68 aa9.19□□□□□ -0.94
SNCAIP-209ENST00000508017 VWFP04275 2813 aa9.19□□□□□ -0.94
SNCAIP-209ENST00000508017 TRAV23DV6A0A075B6W5 121 aa9.18□□□□□ -0.94
SNCAIP-209ENST00000508017 NDUFC2O95298 119 aa9.18□□□□□ -0.94
SNCAIP-209ENST00000508017 CHCHD10Q8WYQ3 142 aaPredicted RBP9.18□□□□□ -0.94
SNCAIP-209ENST00000508017 ENHOQ6UWT2 76 aa9.17□□□□□ -0.94
SNCAIP-209ENST00000508017 CD164L2Q6UWJ8 174 aa9.17□□□□□ -0.94
SNCAIP-209ENST00000508017 PRO0255Q9UI72 69 aa9.17□□□□□ -0.94
SNCAIP-209ENST00000508017 X6R8D5 127 aa9.17□□□□□ -0.94
SNCAIP-209ENST00000508017 GHRHP01286 108 aa9.16□□□□□ -0.94
SNCAIP-209ENST00000508017 ANGP03950 147 aaKnown RBP9.16□□□□□ -0.94
SNCAIP-209ENST00000508017 DSCR8Q96T75 97 aa9.16□□□□□ -0.94
SNCAIP-209ENST00000508017 C16orf95Q9H693 158 aa9.16□□□□□ -0.94
SNCAIP-209ENST00000508017 DEFB4AO15263 64 aa9.15□□□□□ -0.94
SNCAIP-209ENST00000508017 TMEM258P61165 79 aa9.15□□□□□ -0.94
SNCAIP-209ENST00000508017 COX17Q14061 63 aa9.15□□□□□ -0.94
SNCAIP-209ENST00000508017 S100A7L2Q5SY68 101 aa9.15□□□□□ -0.94
SNCAIP-209ENST00000508017 OXTP01178 125 aa9.15□□□□□ -0.94
SNCAIP-209ENST00000508017 C10orf25Q5T742 122 aa9.15□□□□□ -0.94
SNCAIP-209ENST00000508017 C6orf223Q8N319 242 aa9.15□□□□□ -0.94
SNCAIP-209ENST00000508017 DPH3Q96FX2 82 aa9.15□□□□□ -0.94
SNCAIP-209ENST00000508017 M0R2N4 97 aa9.14□□□□□ -0.95
SNCAIP-209ENST00000508017 REG3AQ06141 175 aa9.14□□□□□ -0.95
SNCAIP-209ENST00000508017 SPATA3Q8NHX4 192 aa9.14□□□□□ -0.95
SNCAIP-209ENST00000508017 IGHV4-28A0A0C4DH34 117 aa9.14□□□□□ -0.95
SNCAIP-209ENST00000508017 RPS28P62857 69 aaKnown RBP9.14□□□□□ -0.95
SNCAIP-209ENST00000508017 LYPD5Q6UWN5 251 aa9.14□□□□□ -0.95
SNCAIP-209ENST00000508017 LINC00575Q6W349 94 aa9.14□□□□□ -0.95
SNCAIP-209ENST00000508017 ZNF843Q8N446 348 aa9.14□□□□□ -0.95
SNCAIP-209ENST00000508017 ATP5EP2Q5VTU8 51 aa9.13□□□□□ -0.95
SNCAIP-209ENST00000508017 TENM4Q6N022 2769 aa9.13□□□□□ -0.95
SNCAIP-209ENST00000508017 PDZD2O15018 2839 aa9.13□□□□□ -0.95
SNCAIP-209ENST00000508017 KRTAP1-1Q07627 177 aa9.13□□□□□ -0.95
SNCAIP-209ENST00000508017 UNQ6190/PRO20217Q6UXQ8 127 aa9.13□□□□□ -0.95
SNCAIP-209ENST00000508017 UBL5Q9BZL1 73 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms