RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 AMELXQ99217 191 aa6.95□□□□□ -1.3
HMGCS1-204ENST00000507293 TOMM7Q9P0U1 55 aa6.95□□□□□ -1.3
HMGCS1-204ENST00000507293 VCX2Q9H322 139 aa6.94□□□□□ -1.3
HMGCS1-204ENST00000507293 CKS1BP61024 79 aa6.93□□□□□ -1.3
HMGCS1-204ENST00000507293 ORMDL2Q53FV1 153 aa6.93□□□□□ -1.3
HMGCS1-204ENST00000507293 LINC00469Q8N7U9 141 aa6.93□□□□□ -1.3
HMGCS1-204ENST00000507293 GNB1LQ9BYB4 327 aa6.93□□□□□ -1.3
HMGCS1-204ENST00000507293 LPAP08519 4548 aa6.93□□□□□ -1.3
HMGCS1-204ENST00000507293 IGIPA6NJ69 53 aa6.92□□□□□ -1.3
HMGCS1-204ENST00000507293 NPSP0C0P6 89 aa6.92□□□□□ -1.3
HMGCS1-204ENST00000507293 Q8IZM0 81 aa6.92□□□□□ -1.3
HMGCS1-204ENST00000507293 SLC7A5P1Q8MH63 180 aa6.92□□□□□ -1.3
HMGCS1-204ENST00000507293 K7EMI3 77 aa6.91□□□□□ -1.3
HMGCS1-204ENST00000507293 C6orf226Q5I0X4 101 aa6.91□□□□□ -1.3
HMGCS1-204ENST00000507293 FAM19A3Q7Z5A8 133 aa6.91□□□□□ -1.3
HMGCS1-204ENST00000507293 ALKBH7Q9BT30 221 aaPredicted RBP6.91□□□□□ -1.3
HMGCS1-204ENST00000507293 XAGE1AQ9HD64 81 aa6.91□□□□□ -1.3
HMGCS1-204ENST00000507293 NXT2Q9NPJ8 142 aaKnown RBP6.91□□□□□ -1.3
HMGCS1-204ENST00000507293 RPL13AP40429 203 aaKnown RBP6.9□□□□□ -1.3
HMGCS1-204ENST00000507293 HERVK_113P63121 156 aa6.9□□□□□ -1.3
HMGCS1-204ENST00000507293 CDKN2A-AS1Q9UH64 79 aa6.9□□□□□ -1.3
HMGCS1-204ENST00000507293 C22orf24Q9Y442 160 aa6.9□□□□□ -1.3
HMGCS1-204ENST00000507293 NUPR1O60356 82 aa6.89□□□□□ -1.31
HMGCS1-204ENST00000507293 ZNF861PO60384 105 aa6.89□□□□□ -1.31
HMGCS1-204ENST00000507293 SEC11AP67812 179 aa6.89□□□□□ -1.31
HMGCS1-204ENST00000507293 PAPPA-AS1Q5QFB9 102 aa6.89□□□□□ -1.31
HMGCS1-204ENST00000507293 GEMIN7Q9H840 131 aaKnown RBP6.89□□□□□ -1.31
HMGCS1-204ENST00000507293 F8VRH5 84 aa6.88□□□□□ -1.31
HMGCS1-204ENST00000507293 FABP9Q0Z7S8 132 aa6.88□□□□□ -1.31
HMGCS1-204ENST00000507293 PRR4Q16378 134 aa6.88□□□□□ -1.31
HMGCS1-204ENST00000507293 KIAA1644Q3SXP7 199 aa6.88□□□□□ -1.31
HMGCS1-204ENST00000507293 LBHQ53QV2 105 aaPredicted RBP6.88□□□□□ -1.31
HMGCS1-204ENST00000507293 TIMM17AQ99595 171 aa6.88□□□□□ -1.31
HMGCS1-204ENST00000507293 MRPL18Q9H0U6 180 aaKnown RBP6.88□□□□□ -1.31
HMGCS1-204ENST00000507293 SMCO4Q9NRQ5 59 aa6.88□□□□□ -1.31
HMGCS1-204ENST00000507293 G0S2P27469 103 aa6.87□□□□□ -1.31
HMGCS1-204ENST00000507293 TOMM6Q96B49 74 aa6.87□□□□□ -1.31
HMGCS1-204ENST00000507293 TRAPPC1Q9Y5R8 145 aa6.87□□□□□ -1.31
HMGCS1-204ENST00000507293 SMIM1B2RUZ4 78 aa6.86□□□□□ -1.31
HMGCS1-204ENST00000507293 CXCL5P42830 114 aa6.86□□□□□ -1.31
HMGCS1-204ENST00000507293 MRPL55Q7Z7F7 128 aaKnown RBP6.86□□□□□ -1.31
HMGCS1-204ENST00000507293 TP73-AS1Q9UF72 201 aa6.86□□□□□ -1.31
HMGCS1-204ENST00000507293 ERASQ7Z444 233 aa6.85□□□□□ -1.31
HMGCS1-204ENST00000507293 SCGB3A1Q96QR1 104 aa6.85□□□□□ -1.31
HMGCS1-204ENST00000507293 BCE1O60756 84 aa6.84□□□□□ -1.31
HMGCS1-204ENST00000507293 RPL28P46779 137 aaKnown RBP6.84□□□□□ -1.31
HMGCS1-204ENST00000507293 PDZD11Q5EBL8 140 aa6.84□□□□□ -1.31
HMGCS1-204ENST00000507293 COX7B2Q8TF08 81 aa6.84□□□□□ -1.31
HMGCS1-204ENST00000507293 TINCRA0A1B0GVN0 87 aa6.83□□□□□ -1.32
HMGCS1-204ENST00000507293 RPL37AP8A6NKH3 93 aa6.83□□□□□ -1.32
HMGCS1-204ENST00000507293 TSPAN13O95857 204 aa6.83□□□□□ -1.32
HMGCS1-204ENST00000507293 CBLN2Q8IUK8 224 aa6.83□□□□□ -1.32
HMGCS1-204ENST00000507293 LINC00167Q96N53 147 aa6.83□□□□□ -1.32
HMGCS1-204ENST00000507293 YPEL4Q96NS1 127 aa6.83□□□□□ -1.32
HMGCS1-204ENST00000507293 IGLV5-45A0A087WSX0 123 aa6.82□□□□□ -1.32
HMGCS1-204ENST00000507293 A0A087X002 238 aa6.82□□□□□ -1.32
HMGCS1-204ENST00000507293 GAGE10A6NGK3 116 aa6.82□□□□□ -1.32
HMGCS1-204ENST00000507293 LINC01549A6NIU2 74 aa6.82□□□□□ -1.32
HMGCS1-204ENST00000507293 FA2HQ7L5A8 372 aa6.82□□□□□ -1.32
HMGCS1-204ENST00000507293 SPINK8P0C7L1 97 aa6.81□□□□□ -1.32
HMGCS1-204ENST00000507293 CST9LQ9H4G1 147 aa6.81□□□□□ -1.32
HMGCS1-204ENST00000507293 LINC01546A6NGU7 62 aa6.8□□□□□ -1.32
HMGCS1-204ENST00000507293 CRYGAP11844 174 aa6.8□□□□□ -1.32
HMGCS1-204ENST00000507293 RAB5BP61020 215 aa6.8□□□□□ -1.32
HMGCS1-204ENST00000507293 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
HMGCS1-204ENST00000507293 IGLV5-37A0A075B6J1 123 aa6.79□□□□□ -1.32
HMGCS1-204ENST00000507293 PMVKQ15126 192 aa6.79□□□□□ -1.32
HMGCS1-204ENST00000507293 NKAPP1Q8N9T2 125 aa6.79□□□□□ -1.32
HMGCS1-204ENST00000507293 SCO1O75880 301 aa6.78□□□□□ -1.32
HMGCS1-204ENST00000507293 LINC00614P0C842 121 aa6.78□□□□□ -1.32
HMGCS1-204ENST00000507293 UBE2AP49459 152 aa6.78□□□□□ -1.32
HMGCS1-204ENST00000507293 KRTAP13-1Q8IUC0 172 aa6.78□□□□□ -1.32
HMGCS1-204ENST00000507293 C18orf32Q8TCD1 76 aa6.78□□□□□ -1.32
HMGCS1-204ENST00000507293 ANAPC11Q9NYG5 84 aa6.78□□□□□ -1.32
HMGCS1-204ENST00000507293 H3BRM9 83 aa6.77□□□□□ -1.33
HMGCS1-204ENST00000507293 ATP5LO75964 103 aa6.77□□□□□ -1.33
HMGCS1-204ENST00000507293 IGKV2-28A0A075B6P5 120 aa6.76□□□□□ -1.33
HMGCS1-204ENST00000507293 COLCA2A8K830 154 aa6.76□□□□□ -1.33
HMGCS1-204ENST00000507293 IGKV2D-28P01615 120 aa6.76□□□□□ -1.33
HMGCS1-204ENST00000507293 PFN2P35080 140 aa6.76□□□□□ -1.33
HMGCS1-204ENST00000507293 KRTAP13-2Q52LG2 175 aa6.76□□□□□ -1.33
HMGCS1-204ENST00000507293 TRGC2P03986 189 aa6.75□□□□□ -1.33
HMGCS1-204ENST00000507293 IGLC3P0DOY3 106 aa6.75□□□□□ -1.33
HMGCS1-204ENST00000507293 CHCHD1Q96BP2 118 aaKnown RBP6.75□□□□□ -1.33
HMGCS1-204ENST00000507293 IGLV5-39A0A0G2JS06 123 aa6.74□□□□□ -1.33
HMGCS1-204ENST00000507293 ZNF22P17026 224 aaPredicted RBP6.74□□□□□ -1.33
HMGCS1-204ENST00000507293 S100A1P23297 94 aa6.74□□□□□ -1.33
HMGCS1-204ENST00000507293 NDUFA6P56556 154 aa6.74□□□□□ -1.33
HMGCS1-204ENST00000507293 PRLHP81277 87 aa6.74□□□□□ -1.33
HMGCS1-204ENST00000507293 A0A096LNJ9 63 aa6.73□□□□□ -1.33
HMGCS1-204ENST00000507293 HBDP02042 147 aa6.73□□□□□ -1.33
HMGCS1-204ENST00000507293 VPREB1P12018 145 aa6.73□□□□□ -1.33
HMGCS1-204ENST00000507293 FAM229BQ4G0N7 80 aa6.73□□□□□ -1.33
HMGCS1-204ENST00000507293 FAM19A1Q7Z5A9 133 aa6.73□□□□□ -1.33
HMGCS1-204ENST00000507293 BAGE3Q86Y29 109 aa6.73□□□□□ -1.33
HMGCS1-204ENST00000507293 URB1-AS1Q96HZ7 61 aa6.73□□□□□ -1.33
HMGCS1-204ENST00000507293 RETNLBQ9BQ08 111 aa6.73□□□□□ -1.33
HMGCS1-204ENST00000507293 SND1-IT1Q9HBX3 110 aa6.73□□□□□ -1.33
HMGCS1-204ENST00000507293 ERG28Q9UKR5 140 aa6.73□□□□□ -1.33
HMGCS1-204ENST00000507293 A0A0U1RQV1 116 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms