RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 H0Y9J4 135 aa8.69□□□□□ -1.02
CDC42SE2-209ENST00000506419 PRSS2P07478 247 aa8.69□□□□□ -1.02
CDC42SE2-209ENST00000506419 CKS1BP61024 79 aa8.69□□□□□ -1.02
CDC42SE2-209ENST00000506419 ERASQ7Z444 233 aa8.69□□□□□ -1.02
CDC42SE2-209ENST00000506419 TRAV9-1A0A075B6T8 112 aa8.68□□□□□ -1.02
CDC42SE2-209ENST00000506419 LINC01546A6NGU7 62 aa8.68□□□□□ -1.02
CDC42SE2-209ENST00000506419 G0S2P27469 103 aa8.68□□□□□ -1.02
CDC42SE2-209ENST00000506419 HERVK_113P63121 156 aa8.68□□□□□ -1.02
CDC42SE2-209ENST00000506419 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
CDC42SE2-209ENST00000506419 C22orf24Q9Y442 160 aa8.68□□□□□ -1.02
CDC42SE2-209ENST00000506419 KRTAP1-4P0C5Y4 121 aa8.67□□□□□ -1.02
CDC42SE2-209ENST00000506419 UBE2BP63146 152 aa8.67□□□□□ -1.02
CDC42SE2-209ENST00000506419 SEC11AP67812 179 aa8.67□□□□□ -1.02
CDC42SE2-209ENST00000506419 PAPPA-AS1Q5QFB9 102 aa8.67□□□□□ -1.02
CDC42SE2-209ENST00000506419 GNB1LQ9BYB4 327 aa8.67□□□□□ -1.02
CDC42SE2-209ENST00000506419 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
CDC42SE2-209ENST00000506419 XAGE1AQ9HD64 81 aa8.67□□□□□ -1.02
CDC42SE2-209ENST00000506419 SEC11CQ9BY50 192 aa8.66□□□□□ -1.02
CDC42SE2-209ENST00000506419 SMIM1B2RUZ4 78 aa8.65□□□□□ -1.02
CDC42SE2-209ENST00000506419 F8VRH5 84 aa8.65□□□□□ -1.02
CDC42SE2-209ENST00000506419 CST9LQ9H4G1 147 aa8.65□□□□□ -1.02
CDC42SE2-209ENST00000506419 TINCRA0A1B0GVN0 87 aa8.64□□□□□ -1.03
CDC42SE2-209ENST00000506419 C10orf91Q5T1B1 145 aa8.64□□□□□ -1.03
CDC42SE2-209ENST00000506419 IGLV5-45A0A087WSX0 123 aa8.63□□□□□ -1.03
CDC42SE2-209ENST00000506419 FABP9Q0Z7S8 132 aa8.63□□□□□ -1.03
CDC42SE2-209ENST00000506419 S100PP25815 95 aa8.62□□□□□ -1.03
CDC42SE2-209ENST00000506419 PDZD11Q5EBL8 140 aa8.62□□□□□ -1.03
CDC42SE2-209ENST00000506419 COMMD7Q86VX2 200 aa8.62□□□□□ -1.03
CDC42SE2-209ENST00000506419 MRPL18Q9H0U6 180 aaKnown RBP8.62□□□□□ -1.03
CDC42SE2-209ENST00000506419 ZNF861PO60384 105 aa8.61□□□□□ -1.03
CDC42SE2-209ENST00000506419 COX7B2Q8TF08 81 aa8.61□□□□□ -1.03
CDC42SE2-209ENST00000506419 IGLV1-50A0A075B6I6 118 aa8.6□□□□□ -1.03
CDC42SE2-209ENST00000506419 SPINK8P0C7L1 97 aa8.6□□□□□ -1.03
CDC42SE2-209ENST00000506419 PMVKQ15126 192 aa8.6□□□□□ -1.03
CDC42SE2-209ENST00000506419 LBHQ53QV2 105 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE2-209ENST00000506419 URB1-AS1Q96HZ7 61 aa8.6□□□□□ -1.03
CDC42SE2-209ENST00000506419 A0A096LNJ9 63 aa8.59□□□□□ -1.03
CDC42SE2-209ENST00000506419 LINC01549A6NIU2 74 aa8.59□□□□□ -1.03
CDC42SE2-209ENST00000506419 CXCL5P42830 114 aa8.59□□□□□ -1.03
CDC42SE2-209ENST00000506419 RAB5BP61020 215 aa8.59□□□□□ -1.03
CDC42SE2-209ENST00000506419 COX19Q49B96 90 aa8.59□□□□□ -1.03
CDC42SE2-209ENST00000506419 FA2HQ7L5A8 372 aa8.59□□□□□ -1.03
CDC42SE2-209ENST00000506419 LINC00167Q96N53 147 aa8.59□□□□□ -1.03
CDC42SE2-209ENST00000506419 RPS10P5Q9NQ39 176 aa8.59□□□□□ -1.03
CDC42SE2-209ENST00000506419 MRPL55Q7Z7F7 128 aaKnown RBP8.58□□□□□ -1.04
CDC42SE2-209ENST00000506419 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
CDC42SE2-209ENST00000506419 CARHSP1Q9Y2V2 147 aaKnown RBP8.58□□□□□ -1.04
CDC42SE2-209ENST00000506419 NUPR1O60356 82 aa8.57□□□□□ -1.04
CDC42SE2-209ENST00000506419 RPL37AP8A6NKH3 93 aa8.56□□□□□ -1.04
CDC42SE2-209ENST00000506419 RHEBQ15382 184 aa8.56□□□□□ -1.04
CDC42SE2-209ENST00000506419 SMCO4Q9NRQ5 59 aa8.56□□□□□ -1.04
CDC42SE2-209ENST00000506419 BCE1O60756 84 aa8.55□□□□□ -1.04
CDC42SE2-209ENST00000506419 LINC00614P0C842 121 aa8.55□□□□□ -1.04
CDC42SE2-209ENST00000506419 IGLC3P0DOY3 106 aa8.55□□□□□ -1.04
CDC42SE2-209ENST00000506419 IGLV5-37A0A075B6J1 123 aa8.54□□□□□ -1.04
CDC42SE2-209ENST00000506419 IGLV5-39A0A0G2JS06 123 aa8.54□□□□□ -1.04
CDC42SE2-209ENST00000506419 GAGE10A6NGK3 116 aa8.54□□□□□ -1.04
CDC42SE2-209ENST00000506419 C18orf32Q8TCD1 76 aa8.54□□□□□ -1.04
CDC42SE2-209ENST00000506419 TRAPPC1Q9Y5R8 145 aa8.54□□□□□ -1.04
CDC42SE2-209ENST00000506419 MUC2Q02817 5179 aa8.54□□□□□ -1.04
CDC42SE2-209ENST00000506419 SCO1O75880 301 aa8.53□□□□□ -1.04
CDC42SE2-209ENST00000506419 ZNF22P17026 224 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE2-209ENST00000506419 NDUFA6P56556 154 aa8.53□□□□□ -1.04
CDC42SE2-209ENST00000506419 PMCHL1Q16048 86 aa8.53□□□□□ -1.04
CDC42SE2-209ENST00000506419 H3BRM9 83 aa8.52□□□□□ -1.05
CDC42SE2-209ENST00000506419 A0A087X002 238 aa8.51□□□□□ -1.05
CDC42SE2-209ENST00000506419 PFN2P35080 140 aa8.51□□□□□ -1.05
CDC42SE2-209ENST00000506419 RPL13AP40429 203 aaKnown RBP8.51□□□□□ -1.05
CDC42SE2-209ENST00000506419 RPL28P46779 137 aaKnown RBP8.51□□□□□ -1.05
CDC42SE2-209ENST00000506419 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
CDC42SE2-209ENST00000506419 ANAPC11Q9NYG5 84 aa8.51□□□□□ -1.05
CDC42SE2-209ENST00000506419 ATP5LO75964 103 aa8.5□□□□□ -1.05
CDC42SE2-209ENST00000506419 C11orf86A6NJI1 115 aa8.49□□□□□ -1.05
CDC42SE2-209ENST00000506419 HBDP02042 147 aa8.49□□□□□ -1.05
CDC42SE2-209ENST00000506419 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
CDC42SE2-209ENST00000506419 APOC3P02656 99 aa8.48□□□□□ -1.05
CDC42SE2-209ENST00000506419 Q8NDZ9 215 aa8.48□□□□□ -1.05
CDC42SE2-209ENST00000506419 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE2-209ENST00000506419 SND1-IT1Q9HBX3 110 aa8.48□□□□□ -1.05
CDC42SE2-209ENST00000506419 TSPAN13O95857 204 aa8.47□□□□□ -1.05
CDC42SE2-209ENST00000506419 VPREB1P12018 145 aa8.47□□□□□ -1.05
CDC42SE2-209ENST00000506419 PRR4Q16378 134 aa8.47□□□□□ -1.05
CDC42SE2-209ENST00000506419 NKAPP1Q8N9T2 125 aa8.47□□□□□ -1.05
CDC42SE2-209ENST00000506419 YPEL4Q96NS1 127 aa8.47□□□□□ -1.05
CDC42SE2-209ENST00000506419 ERG28Q9UKR5 140 aa8.47□□□□□ -1.05
CDC42SE2-209ENST00000506419 IGKV2-28A0A075B6P5 120 aa8.46□□□□□ -1.06
CDC42SE2-209ENST00000506419 IGKV2D-28P01615 120 aa8.46□□□□□ -1.06
CDC42SE2-209ENST00000506419 CRYGAP11844 174 aa8.45□□□□□ -1.06
CDC42SE2-209ENST00000506419 KRTAP13-2Q52LG2 175 aa8.45□□□□□ -1.06
CDC42SE2-209ENST00000506419 TMEM238C9JI98 176 aa8.44□□□□□ -1.06
CDC42SE2-209ENST00000506419 UBE2AP49459 152 aa8.44□□□□□ -1.06
CDC42SE2-209ENST00000506419 TMEM170BQ5T4T1 132 aa8.44□□□□□ -1.06
CDC42SE2-209ENST00000506419 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
CDC42SE2-209ENST00000506419 MUC17Q685J3 4493 aa8.44□□□□□ -1.06
CDC42SE2-209ENST00000506419 SNAPINO95295 136 aa8.43□□□□□ -1.06
CDC42SE2-209ENST00000506419 COX17Q14061 63 aa8.43□□□□□ -1.06
CDC42SE2-209ENST00000506419 CHTOPQ9Y3Y2 248 aaKnown RBP8.43□□□□□ -1.06
CDC42SE2-209ENST00000506419 SVBPQ8N300 66 aa8.42□□□□□ -1.06
CDC42SE2-209ENST00000506419 TMEM223A0PJW6 202 aa8.41□□□□□ -1.06
CDC42SE2-209ENST00000506419 M0R378 163 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms