RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ATP6V0CP27449 155 aa3.95□□□□□ -1.78
VCAN-206ENST00000505615 UBE2G1P62253 170 aa3.95□□□□□ -1.78
VCAN-206ENST00000505615 PPP1R1CQ8WVI7 109 aa3.95□□□□□ -1.78
VCAN-206ENST00000505615 USH2AO75445 5202 aa3.95□□□□□ -1.78
VCAN-206ENST00000505615 G3V3Q6 166 aa3.94□□□□□ -1.78
VCAN-206ENST00000505615 COX7A2LO14548 114 aa3.94□□□□□ -1.78
VCAN-206ENST00000505615 MPC2O95563 127 aa3.94□□□□□ -1.78
VCAN-206ENST00000505615 NCR2O95944 276 aa3.94□□□□□ -1.78
VCAN-206ENST00000505615 APCSP02743 223 aa3.94□□□□□ -1.78
VCAN-206ENST00000505615 GIPP09681 153 aaPredicted RBP3.94□□□□□ -1.78
VCAN-206ENST00000505615 IGLC6P0CF74 106 aa3.94□□□□□ -1.78
VCAN-206ENST00000505615 H2BFSP57053 126 aa3.94□□□□□ -1.78
VCAN-206ENST00000505615 SS18Q15532 418 aa3.94□□□□□ -1.78
VCAN-206ENST00000505615 NOTCH2NLQ7Z3S9 236 aa3.94□□□□□ -1.78
VCAN-206ENST00000505615 NRACQ8N912 160 aa3.94□□□□□ -1.78
VCAN-206ENST00000505615 PSMG3Q9BT73 122 aaPredicted RBP3.94□□□□□ -1.78
VCAN-206ENST00000505615 MRPL35Q9NZE8 188 aaKnown RBP3.94□□□□□ -1.78
VCAN-206ENST00000505615 LINC00614P0C842 121 aa3.93□□□□□ -1.78
VCAN-206ENST00000505615 AKR1C3P42330 323 aa3.93□□□□□ -1.78
VCAN-206ENST00000505615 PSMB2P49721 201 aa3.93□□□□□ -1.78
VCAN-206ENST00000505615 RAB5BP61020 215 aa3.93□□□□□ -1.78
VCAN-206ENST00000505615 SPAG11BQ08648 103 aa3.93□□□□□ -1.78
VCAN-206ENST00000505615 TEX43Q6ZNM6 134 aa3.93□□□□□ -1.78
VCAN-206ENST00000505615 NKX6-2Q9C056 277 aaPredicted RBP3.93□□□□□ -1.78
VCAN-206ENST00000505615 SMDT1Q9H4I9 107 aa3.93□□□□□ -1.78
VCAN-206ENST00000505615 CDC42SE2Q9NRR3 84 aa3.93□□□□□ -1.78
VCAN-206ENST00000505615 CCDC160A6NGH7 325 aa3.92□□□□□ -1.78
VCAN-206ENST00000505615 NUPR1O60356 82 aa3.92□□□□□ -1.78
VCAN-206ENST00000505615 PPBPP02775 128 aa3.92□□□□□ -1.78
VCAN-206ENST00000505615 SERF2P84101 59 aa3.92□□□□□ -1.78
VCAN-206ENST00000505615 TWIST1Q15672 202 aa3.92□□□□□ -1.78
VCAN-206ENST00000505615 FP248Q71RG6 208 aaPredicted RBP3.92□□□□□ -1.78
VCAN-206ENST00000505615 LINC00337Q8N6G1 96 aa3.92□□□□□ -1.78
VCAN-206ENST00000505615 RPL39LQ96EH5 51 aaKnown RBP3.92□□□□□ -1.78
VCAN-206ENST00000505615 IMMP2LQ96T52 175 aa3.92□□□□□ -1.78
VCAN-206ENST00000505615 C6orf48Q9UBA6 75 aa3.92□□□□□ -1.78
VCAN-206ENST00000505615 TNFSF18Q9UNG2 199 aa3.92□□□□□ -1.78
VCAN-206ENST00000505615 IGLV4-3A0A075B6K6 122 aa3.91□□□□□ -1.78
VCAN-206ENST00000505615 CTXND1A0A1B0GTU2 59 aa3.91□□□□□ -1.78
VCAN-206ENST00000505615 INMT-MINDY4F8WBC2 141 aa3.91□□□□□ -1.78
VCAN-206ENST00000505615 ARPC5O15511 151 aa3.91□□□□□ -1.78
VCAN-206ENST00000505615 NDUFS5O43920 106 aa3.91□□□□□ -1.78
VCAN-206ENST00000505615 NDUFA5Q16718 116 aa3.91□□□□□ -1.78
VCAN-206ENST00000505615 C9orf129Q5T035 196 aaKnown RBP3.91□□□□□ -1.78
VCAN-206ENST00000505615 C5orf38Q86SI9 138 aa3.91□□□□□ -1.78
VCAN-206ENST00000505615 OR13C6PQ8NH95 151 aa3.91□□□□□ -1.78
VCAN-206ENST00000505615 TMEM101Q96IK0 257 aa3.91□□□□□ -1.78
VCAN-206ENST00000505615 TCEAL7Q9BRU2 100 aa3.91□□□□□ -1.78
VCAN-206ENST00000505615 C1orf196B1AJZ1 125 aa3.9□□□□□ -1.79
VCAN-206ENST00000505615 TRGC1P0CF51 173 aa3.9□□□□□ -1.79
VCAN-206ENST00000505615 RPL28P46779 137 aaKnown RBP3.9□□□□□ -1.79
VCAN-206ENST00000505615 DEFA1P59665 94 aa3.9□□□□□ -1.79
VCAN-206ENST00000505615 IFITM2Q01629 132 aa3.9□□□□□ -1.79
VCAN-206ENST00000505615 KIAA0087Q14695 138 aa3.9□□□□□ -1.79
VCAN-206ENST00000505615 FAM229BQ4G0N7 80 aa3.9□□□□□ -1.79
VCAN-206ENST00000505615 UNQ6190/PRO20217Q6UXQ8 127 aa3.9□□□□□ -1.79
VCAN-206ENST00000505615 TMUB2Q71RG4 321 aa3.9□□□□□ -1.79
VCAN-206ENST00000505615 BAGE2Q86Y30 109 aa3.9□□□□□ -1.79
VCAN-206ENST00000505615 SMIM20Q8N5G0 67 aa3.9□□□□□ -1.79
VCAN-206ENST00000505615 OR10D4PQ8NGN7 298 aa3.9□□□□□ -1.79
VCAN-206ENST00000505615 SDHAF1A6NFY7 115 aa3.89□□□□□ -1.79
VCAN-206ENST00000505615 RPL37AP8A6NKH3 93 aa3.89□□□□□ -1.79
VCAN-206ENST00000505615 NDUFA1O15239 70 aa3.89□□□□□ -1.79
VCAN-206ENST00000505615 CTRLP40313 264 aa3.89□□□□□ -1.79
VCAN-206ENST00000505615 KRTAP13-1Q8IUC0 172 aa3.89□□□□□ -1.79
VCAN-206ENST00000505615 NKAPP1Q8N9T2 125 aa3.89□□□□□ -1.79
VCAN-206ENST00000505615 ORAOV1Q8WV07 137 aa3.89□□□□□ -1.79
VCAN-206ENST00000505615 SPANXA1Q9NS26 97 aa3.89□□□□□ -1.79
VCAN-206ENST00000505615 A0A1B0GXF2 115 aa3.88□□□□□ -1.79
VCAN-206ENST00000505615 BCE1O60756 84 aa3.88□□□□□ -1.79
VCAN-206ENST00000505615 PMVKQ15126 192 aa3.88□□□□□ -1.79
VCAN-206ENST00000505615 BATFQ16520 125 aa3.88□□□□□ -1.79
VCAN-206ENST00000505615 RNASE13Q5GAN3 156 aaKnown RBP3.88□□□□□ -1.79
VCAN-206ENST00000505615 LYZL1Q6UWQ5 148 aa3.88□□□□□ -1.79
VCAN-206ENST00000505615 TMEM242Q9NWH2 141 aa3.88□□□□□ -1.79
VCAN-206ENST00000505615 TRAV13-1A0A0B4J241 112 aa3.87□□□□□ -1.79
VCAN-206ENST00000505615 MAP1LC3B2A6NCE7 125 aa3.87□□□□□ -1.79
VCAN-206ENST00000505615 F2Z2F3 143 aa3.87□□□□□ -1.79
VCAN-206ENST00000505615 I3L3M4 83 aa3.87□□□□□ -1.79
VCAN-206ENST00000505615 PSPHP1O15172 72 aa3.87□□□□□ -1.79
VCAN-206ENST00000505615 DDTP30046 118 aa3.87□□□□□ -1.79
VCAN-206ENST00000505615 TMEM241Q24JQ0 296 aa3.87□□□□□ -1.79
VCAN-206ENST00000505615 COA6Q5JTJ3 125 aaKnown RBP3.87□□□□□ -1.79
VCAN-206ENST00000505615 BORCS7Q96B45 105 aa3.87□□□□□ -1.79
VCAN-206ENST00000505615 MAP1LC3BQ9GZQ8 125 aa3.87□□□□□ -1.79
VCAN-206ENST00000505615 RNASE7Q9H1E1 156 aaKnown RBP3.87□□□□□ -1.79
VCAN-206ENST00000505615 C22orf24Q9Y442 160 aa3.87□□□□□ -1.79
VCAN-206ENST00000505615 IGKV2D-26A0A0A0MRZ7 120 aa3.86□□□□□ -1.79
VCAN-206ENST00000505615 TRBV6-5A0A0K0K1A5 114 aa3.86□□□□□ -1.79
VCAN-206ENST00000505615 NDUFC2-KCTD14E9PQ53 114 aa3.86□□□□□ -1.79
VCAN-206ENST00000505615 RPS20P60866 119 aaKnown RBP3.86□□□□□ -1.79
VCAN-206ENST00000505615 ADAMTSL4-AS1Q5T5F5 129 aa3.86□□□□□ -1.79
VCAN-206ENST00000505615 SCGB1D4Q6XE38 83 aa3.86□□□□□ -1.79
VCAN-206ENST00000505615 Q6ZUT4 128 aa3.86□□□□□ -1.79
VCAN-206ENST00000505615 C3orf22Q8N5N4 141 aa3.86□□□□□ -1.79
VCAN-206ENST00000505615 CCDC32Q9BV29 185 aa3.86□□□□□ -1.79
VCAN-206ENST00000505615 CNFNQ9BYD5 112 aa3.86□□□□□ -1.79
VCAN-206ENST00000505615 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
VCAN-206ENST00000505615 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
VCAN-206ENST00000505615 C7orf77A4D0Y5 90 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms