RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 FAM222AQ5U5X8 452 aa2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 MUSTN1Q8IVN3 82 aa2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 LINC01600Q96MT4 127 aa2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 ANKRD11Q6UB99 2663 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 ASPMQ8IZT6 3477 aa2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 DOPEY2Q9Y3R5 2298 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 SMG1Q96Q15 3661 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 TRAV25A0A0B4J276 109 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 IGHV1-58A0A0C4DH39 117 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 TINCRA0A1B0GVN0 87 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 KALRNO60229 2985 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 SPINK8P0C7L1 97 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 HTN1P15515 57 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 COX6A2Q02221 97 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 ANKRD29Q8N6D5 301 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 ZNF418Q8TF45 676 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 DNAJC30Q96LL9 226 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 SIGMAR1Q99720 223 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 SPANXDQ9BXN6 97 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 GTSF1LQ9H1H1 148 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 SPANXA1Q9NS26 97 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 SPANXCQ9NY87 97 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 PRO1854Q9UHT4 67 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 TTC28Q96AY4 2481 aa2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.85□□□□□ -1.95
TRAPPC13-207ENST00000505108 BOD1L1Q8NFC6 3051 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 CSMD1Q96PZ7 3565 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 LOC107984156A0A0G2JMH3 177 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 M0QXV9 152 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 LINC00694P0DN24 101 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 SCGB1A1P11684 91 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 CMC4P56277 68 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 ZFAND6Q6FIF0 208 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 SOSTDC1Q6X4U4 206 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 FAM19A3Q7Z5A8 133 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 TEN1Q86WV5 123 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 ARL17AQ8IVW1 177 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 LINC00304Q8N9R0 145 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 DYNLRB2Q8TF09 96 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 PPDPFLQ8WWR9 84 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 LINC01587Q99440 93 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 TIMM21Q9BVV7 248 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 CDKN2A-AS1Q9UH64 79 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 NDUFA12Q9UI09 145 aa2.84□□□□□ -1.95
TRAPPC13-207ENST00000505108 RIF1Q5UIP0 2472 aaKnown RBP2.84□□□□□ -1.96
TRAPPC13-207ENST00000505108 ZFHX2Q9C0A1 2572 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 TRBV20-1A0A075B6N2 111 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 TRBV30A0A0K0K1B3 111 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 F5H768 121 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 NDUFA1O15239 70 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 TIMM17BO60830 172 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 MT-ATP8P03928 68 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 SMAGPQ0VAQ4 97 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 MIAQ16674 131 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 Q6ZTI0 123 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 TMEM86BQ8N661 226 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 WFDC11Q8NEX6 87 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 WFDC10AQ9H1F0 79 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 ERG28Q9UKR5 140 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 CACNA1BQ00975 2339 aa2.83□□□□□ -1.96
TRAPPC13-207ENST00000505108 ADGRG4Q8IZF6 3080 aa2.82□□□□□ -1.96
TRAPPC13-207ENST00000505108 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC13-207ENST00000505108 C9JAW5 83 aa2.82□□□□□ -1.96
TRAPPC13-207ENST00000505108 H7C2G1 150 aa2.82□□□□□ -1.96
TRAPPC13-207ENST00000505108 J3QR89 54 aa2.82□□□□□ -1.96
TRAPPC13-207ENST00000505108 SLC25A20O43772 301 aa2.82□□□□□ -1.96
TRAPPC13-207ENST00000505108 NPC2P61916 151 aa2.82□□□□□ -1.96
TRAPPC13-207ENST00000505108 LYRM7Q5U5X0 104 aa2.82□□□□□ -1.96
TRAPPC13-207ENST00000505108 DAND5Q8N907 189 aa2.82□□□□□ -1.96
TRAPPC13-207ENST00000505108 ICOSQ9Y6W8 199 aa2.82□□□□□ -1.96
TRAPPC13-207ENST00000505108 HIVEP2P31629 2446 aa2.82□□□□□ -1.96
TRAPPC13-207ENST00000505108 SPTA1P02549 2419 aa2.81□□□□□ -1.96
TRAPPC13-207ENST00000505108 RP1L1Q8IWN7 2480 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC13-207ENST00000505108 TLN1Q9Y490 2541 aaKnown RBP2.81□□□□□ -1.96
TRAPPC13-207ENST00000505108 TRGV1A0A0A0MS02 117 aa2.81□□□□□ -1.96
TRAPPC13-207ENST00000505108 TRAV4A0A0B4J268 109 aa2.81□□□□□ -1.96
TRAPPC13-207ENST00000505108 TRBV10-1A0A0K0K1A3 114 aa2.81□□□□□ -1.96
TRAPPC13-207ENST00000505108 C16orf90A8MZG2 172 aa2.81□□□□□ -1.96
TRAPPC13-207ENST00000505108 CLEC2BQ92478 149 aa2.81□□□□□ -1.96
TRAPPC13-207ENST00000505108 ZNF625Q96I27 306 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC13-207ENST00000505108 C16orf95Q9H693 158 aa2.81□□□□□ -1.96
TRAPPC13-207ENST00000505108 AKAP6Q13023 2319 aa2.81□□□□□ -1.96
TRAPPC13-207ENST00000505108 PIEZO2Q9H5I5 2752 aa2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 TPRP12270 2363 aaKnown RBP2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 TRBV10-2A0A0K0K1G8 114 aa2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 LST1O00453 97 aa2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 IGLV1-51P01701 117 aa2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 SCGB1C2P0DMR2 95 aa2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 IFITM1P13164 125 aa2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 ATXN8Q156A1 80 aa2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 DEFB121Q5J5C9 76 aa2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 LINC00308Q8TCZ7 52 aa2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 CDC42SE2Q9NRR3 84 aa2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 C22orf24Q9Y442 160 aa2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 LRBAP50851 2863 aa2.8□□□□□ -1.96
TRAPPC13-207ENST00000505108 IGF2RP11717 2491 aa2.79□□□□□ -1.96
TRAPPC13-207ENST00000505108 H3BT86 120 aa2.79□□□□□ -1.96
TRAPPC13-207ENST00000505108 HERVK_113P63121 156 aa2.79□□□□□ -1.96
TRAPPC13-207ENST00000505108 DAZ4Q86SG3 579 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-207ENST00000505108 NOP10Q9NPE3 64 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms