RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 FXYD6-FXYD2A0A087WZ82 144 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 C10orf142B7Z368 130 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 CFDP00746 253 aaPredicted RBP0.5□□□□□ -2.33
SUB1-204ENST00000504016 SPINK1P00995 79 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 ADIRFQ15847 76 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 Q5BKY6 102 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 LINC00643Q86TS7 51 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 DEFB107AQ8IZN7 70 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 PSENENQ9NZ42 101 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 HIGD1BQ9P298 99 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 PLCE1Q9P212 2302 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 PIEZO2Q9H5I5 2752 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 ANKRD26Q9UPS8 1709 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 CLTCQ00610 1675 aaKnown RBP0.49□□□□□ -2.33
SUB1-204ENST00000504016 ARHGEF5Q12774 1597 aa0.49□□□□□ -2.33
SUB1-204ENST00000504016 CUX1P39880 1505 aa0.49□□□□□ -2.33
SUB1-204ENST00000504016 DNAJC13O75165 2243 aa0.49□□□□□ -2.33
SUB1-204ENST00000504016 CCDC18Q5T9S5 1454 aa0.49□□□□□ -2.33
SUB1-204ENST00000504016 MYO7BQ6PIF6 2116 aa0.49□□□□□ -2.33
SUB1-204ENST00000504016 COX6B1P14854 86 aa0.49□□□□□ -2.33
SUB1-204ENST00000504016 NMSQ5H8A3 153 aa0.49□□□□□ -2.33
SUB1-204ENST00000504016 DEFB123Q8N688 67 aa0.49□□□□□ -2.33
SUB1-204ENST00000504016 CRIPTQ9P021 101 aa0.49□□□□□ -2.33
SUB1-204ENST00000504016 ZNF236Q9UL36 1845 aa0.49□□□□□ -2.33
SUB1-204ENST00000504016 PTPRZ1P23471 2315 aaPredicted RBP0.49□□□□□ -2.33
SUB1-204ENST00000504016 MUC5BQ9HC84 5762 aaPredicted RBP0.49□□□□□ -2.33
SUB1-204ENST00000504016 USP24Q9UPU5 2620 aa0.49□□□□□ -2.33
SUB1-204ENST00000504016 DOPEY2Q9Y3R5 2298 aa0.48□□□□□ -2.33
SUB1-204ENST00000504016 A0A1B0GUT8 65 aa0.48□□□□□ -2.33
SUB1-204ENST00000504016 NDUFB1O75438 58 aa0.48□□□□□ -2.33
SUB1-204ENST00000504016 RPL38P63173 70 aaKnown RBP0.48□□□□□ -2.33
SUB1-204ENST00000504016 COL4A6Q14031 1691 aa0.48□□□□□ -2.33
SUB1-204ENST00000504016 NLRP1Q9C000 1473 aa0.48□□□□□ -2.33
SUB1-204ENST00000504016 NRXN1Q9ULB1 1477 aa0.48□□□□□ -2.33
SUB1-204ENST00000504016 CELSR2Q9HCU4 2923 aa0.48□□□□□ -2.33
SUB1-204ENST00000504016 ZFYVE26Q68DK2 2539 aa0.47□□□□□ -2.33
SUB1-204ENST00000504016 A0A0G2JMZ2 1700 aa0.47□□□□□ -2.33
SUB1-204ENST00000504016 URB1O60287 2271 aaKnown RBP0.47□□□□□ -2.33
SUB1-204ENST00000504016 SCRIBQ14160 1630 aa0.47□□□□□ -2.33
SUB1-204ENST00000504016 MYMXA0A1B0GTQ4 84 aa0.47□□□□□ -2.33
SUB1-204ENST00000504016 I3L2K1 104 aa0.47□□□□□ -2.33
SUB1-204ENST00000504016 WFDC2Q14508 124 aa0.47□□□□□ -2.33
SUB1-204ENST00000504016 ST20Q9HBF5 79 aa0.47□□□□□ -2.33
SUB1-204ENST00000504016 UBE2D4Q9Y2X8 147 aa0.47□□□□□ -2.33
SUB1-204ENST00000504016 PLXNB2O15031 1838 aa0.47□□□□□ -2.33
SUB1-204ENST00000504016 AKAP6Q13023 2319 aa0.47□□□□□ -2.33
SUB1-204ENST00000504016 SPTBN1Q01082 2364 aaKnown RBP0.46□□□□□ -2.34
SUB1-204ENST00000504016 UNC79Q9P2D8 2635 aa0.46□□□□□ -2.34
SUB1-204ENST00000504016 BTAF1O14981 1849 aa0.46□□□□□ -2.34
SUB1-204ENST00000504016 LINC00959A0A1B0GUT2 108 aa0.46□□□□□ -2.34
SUB1-204ENST00000504016 CEBPZOSA8MTT3 80 aa0.46□□□□□ -2.34
SUB1-204ENST00000504016 IQCF6A8MYZ5 107 aa0.46□□□□□ -2.34
SUB1-204ENST00000504016 I3L3M4 83 aa0.46□□□□□ -2.34
SUB1-204ENST00000504016 SPINK4O60575 86 aa0.46□□□□□ -2.34
SUB1-204ENST00000504016 IGLC2P0DOY2 106 aa0.46□□□□□ -2.34
SUB1-204ENST00000504016 IGLC3P0DOY3 106 aa0.46□□□□□ -2.34
SUB1-204ENST00000504016 Q5VSD8 79 aa0.46□□□□□ -2.34
SUB1-204ENST00000504016 LRRC9Q6ZRR7 1453 aa0.46□□□□□ -2.34
SUB1-204ENST00000504016 NAV2Q8IVL1 2488 aa0.45□□□□□ -2.34
SUB1-204ENST00000504016 TULP4Q9NRJ4 1543 aa0.45□□□□□ -2.34
SUB1-204ENST00000504016 XRN1Q8IZH2 1706 aaKnown RBP0.45□□□□□ -2.34
SUB1-204ENST00000504016 KIAA1551Q9HCM1 1747 aa0.45□□□□□ -2.34
SUB1-204ENST00000504016 SPTY2D1-AS1A0A0U1RR47 76 aa0.45□□□□□ -2.34
SUB1-204ENST00000504016 HMGA1P17096 107 aaKnown RBP0.45□□□□□ -2.34
SUB1-204ENST00000504016 DEFB112Q30KQ8 113 aa0.45□□□□□ -2.34
SUB1-204ENST00000504016 PKDREJQ9NTG1 2253 aa0.45□□□□□ -2.34
SUB1-204ENST00000504016 IGF2RP11717 2491 aa0.45□□□□□ -2.34
SUB1-204ENST00000504016 ANK2Q01484 3957 aa0.45□□□□□ -2.34
SUB1-204ENST00000504016 AHNAKQ09666 5890 aaKnown RBP0.44□□□□□ -2.34
SUB1-204ENST00000504016 NUP188Q5SRE5 1749 aa0.44□□□□□ -2.34
SUB1-204ENST00000504016 MED14O60244 1454 aa0.44□□□□□ -2.34
SUB1-204ENST00000504016 CCL22O00626 93 aa0.44□□□□□ -2.34
SUB1-204ENST00000504016 PRH1P02810 166 aa0.44□□□□□ -2.34
SUB1-204ENST00000504016 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
SUB1-204ENST00000504016 SMR3AQ99954 134 aa0.44□□□□□ -2.34
SUB1-204ENST00000504016 NHSL1Q5SYE7 1610 aa0.44□□□□□ -2.34
SUB1-204ENST00000504016 PTPN13Q12923 2485 aa0.44□□□□□ -2.34
SUB1-204ENST00000504016 SAMD9Q5K651 1589 aa0.44□□□□□ -2.34
SUB1-204ENST00000504016 SCN7AQ01118 1682 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 PAPPAQ13219 1627 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 BIVM-ERCC5R4GMW8 1640 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 K7EQZ3 153 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 DEFB109BQ30KR1 87 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 TDRG1Q3Y452 100 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 ATP5EP2Q5VTU8 51 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 U3KQA8 63 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 TNCP24821 2201 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 USF3Q68DE3 2245 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 CLIP1P30622 1438 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 PTPRQQ9UMZ3 2332 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 IGSF10Q6WRI0 2623 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 NEXMIFQ5QGS0 1516 aa0.43□□□□□ -2.34
SUB1-204ENST00000504016 MYH4Q9Y623 1939 aa0.42□□□□□ -2.34
SUB1-204ENST00000504016 RGPD4Q7Z3J3 1758 aa0.42□□□□□ -2.34
SUB1-204ENST00000504016 MYO3AQ8NEV4 1616 aa0.42□□□□□ -2.34
SUB1-204ENST00000504016 ATP7BP35670 1465 aa0.42□□□□□ -2.34
SUB1-204ENST00000504016 KNDC1Q76NI1 1749 aa0.42□□□□□ -2.34
SUB1-204ENST00000504016 FRAS1Q86XX4 4008 aa0.42□□□□□ -2.34
SUB1-204ENST00000504016 CPSF4LA6NMK7 179 aaKnown RBP0.42□□□□□ -2.34
SUB1-204ENST00000504016 GAFA1Q96PS6 74 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms