RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 NOTCH3Q9UM47 2321 aa10.37□□□□□ -0.75
SNF8-203ENST00000504000 ORMDL1Q9P0S3 153 aa10.37□□□□□ -0.75
SNF8-203ENST00000504000 PRO0255Q9UI72 69 aa10.37□□□□□ -0.75
SNF8-203ENST00000504000 ATOX1O00244 68 aa10.36□□□□□ -0.75
SNF8-203ENST00000504000 GYPEP15421 78 aa10.36□□□□□ -0.75
SNF8-203ENST00000504000 OR13C6PQ8NH95 151 aa10.36□□□□□ -0.75
SNF8-203ENST00000504000 C14orf132Q9NPU4 83 aa10.36□□□□□ -0.75
SNF8-203ENST00000504000 TLN2Q9Y4G6 2542 aa10.36□□□□□ -0.75
SNF8-203ENST00000504000 ITPR3Q14573 2671 aa10.36□□□□□ -0.75
SNF8-203ENST00000504000 KRTAP1-1Q07627 177 aa10.36□□□□□ -0.75
SNF8-203ENST00000504000 C9orf129Q5T035 196 aaKnown RBP10.36□□□□□ -0.75
SNF8-203ENST00000504000 APCP25054 2843 aa10.35□□□□□ -0.75
SNF8-203ENST00000504000 IGHV4-28A0A0C4DH34 117 aa10.35□□□□□ -0.75
SNF8-203ENST00000504000 COX7CP15954 63 aa10.35□□□□□ -0.75
SNF8-203ENST00000504000 JMJD7-PLA2G4BH0Y9G9 81 aa10.34□□□□□ -0.75
SNF8-203ENST00000504000 DEFB130BP0DP73 79 aa10.34□□□□□ -0.75
SNF8-203ENST00000504000 DEFB130AP0DP74 79 aa10.34□□□□□ -0.75
SNF8-203ENST00000504000 XCL1P47992 114 aa10.34□□□□□ -0.75
SNF8-203ENST00000504000 USP24Q9UPU5 2620 aa10.34□□□□□ -0.75
SNF8-203ENST00000504000 C9orf153Q5TBE3 101 aa10.34□□□□□ -0.75
SNF8-203ENST00000504000 CD164L2Q6UWJ8 174 aa10.34□□□□□ -0.75
SNF8-203ENST00000504000 MUC7Q8TAX7 377 aa10.34□□□□□ -0.75
SNF8-203ENST00000504000 ZNF469Q96JG9 3925 aaPredicted RBP10.33□□□□□ -0.76
SNF8-203ENST00000504000 CCKP06307 115 aa10.33□□□□□ -0.76
SNF8-203ENST00000504000 KIAA0087Q14695 138 aa10.33□□□□□ -0.76
SNF8-203ENST00000504000 LINC00846Q9NV44 126 aa10.33□□□□□ -0.76
SNF8-203ENST00000504000 LYRM9A8MSI8 78 aa10.32□□□□□ -0.76
SNF8-203ENST00000504000 HILS1P60008 231 aa10.32□□□□□ -0.76
SNF8-203ENST00000504000 NANOS2P60321 138 aaKnown RBP10.32□□□□□ -0.76
SNF8-203ENST00000504000 SMIM20Q8N5G0 67 aa10.32□□□□□ -0.76
SNF8-203ENST00000504000 C2orf48Q96LS8 159 aa10.32□□□□□ -0.76
SNF8-203ENST00000504000 X6R8D5 127 aa10.32□□□□□ -0.76
SNF8-203ENST00000504000 TMEM256-PLSCR3K7ERE1 68 aa10.32□□□□□ -0.76
SNF8-203ENST00000504000 CRYGAP11844 174 aa10.32□□□□□ -0.76
SNF8-203ENST00000504000 RPL18AQ02543 176 aaKnown RBP10.32□□□□□ -0.76
SNF8-203ENST00000504000 Q8N814 137 aa10.32□□□□□ -0.76
SNF8-203ENST00000504000 NF1P21359 2839 aa10.32□□□□□ -0.76
SNF8-203ENST00000504000 JMJD1CQ15652 2540 aa10.31□□□□□ -0.76
SNF8-203ENST00000504000 S100A7L2Q5SY68 101 aa10.31□□□□□ -0.76
SNF8-203ENST00000504000 NCR3O14931 201 aa10.3□□□□□ -0.76
SNF8-203ENST00000504000 ZFYVE26Q68DK2 2539 aa10.3□□□□□ -0.76
SNF8-203ENST00000504000 SONP18583 2426 aaKnown RBP10.3□□□□□ -0.76
SNF8-203ENST00000504000 CFAP161Q6P656 301 aa10.29□□□□□ -0.76
SNF8-203ENST00000504000 ATP5EP2Q5VTU8 51 aa10.28□□□□□ -0.76
SNF8-203ENST00000504000 C11orf68Q9H3H3 251 aaKnown RBP10.28□□□□□ -0.76
SNF8-203ENST00000504000 NBPF19A0A087WUL8 3843 aa10.27□□□□□ -0.76
SNF8-203ENST00000504000 SLPIP03973 132 aa10.27□□□□□ -0.76
SNF8-203ENST00000504000 LINC00482Q8N8I6 264 aa10.27□□□□□ -0.76
SNF8-203ENST00000504000 NIPBLQ6KC79 2804 aaeCLIP10.26□□□□□ -0.77
SNF8-203ENST00000504000 LYPD5Q6UWN5 251 aa10.26□□□□□ -0.77
SNF8-203ENST00000504000 LINC00269Q8N2A0 174 aa10.26□□□□□ -0.77
SNF8-203ENST00000504000 CHCHD10Q8WYQ3 142 aaPredicted RBP10.26□□□□□ -0.77
SNF8-203ENST00000504000 FLNAP21333 2647 aaKnown RBP10.26□□□□□ -0.77
SNF8-203ENST00000504000 REG3AQ06141 175 aa10.25□□□□□ -0.77
SNF8-203ENST00000504000 SERP2Q8N6R1 65 aa10.24□□□□□ -0.77
SNF8-203ENST00000504000 IGKV3D-7A0A0C4DH55 119 aa10.23□□□□□ -0.77
SNF8-203ENST00000504000 TRBV10-3A0A0K0K1G6 114 aa10.23□□□□□ -0.77
SNF8-203ENST00000504000 CLPSL2Q6UWE3 100 aa10.23□□□□□ -0.77
SNF8-203ENST00000504000 ANK3Q12955 4377 aaKnown RBP10.23□□□□□ -0.77
SNF8-203ENST00000504000 A0A0J9YWU9 116 aa10.22□□□□□ -0.77
SNF8-203ENST00000504000 H3BQ85 93 aa10.22□□□□□ -0.77
SNF8-203ENST00000504000 IGHV4-30-4P0DP06 118 aa10.22□□□□□ -0.77
SNF8-203ENST00000504000 PRR3P79522 188 aaKnown RBP10.22□□□□□ -0.77
SNF8-203ENST00000504000 C3orf56Q8N813 242 aa10.22□□□□□ -0.77
SNF8-203ENST00000504000 ANGP03950 147 aaKnown RBP10.21□□□□□ -0.77
SNF8-203ENST00000504000 LINC00575Q6W349 94 aa10.21□□□□□ -0.77
SNF8-203ENST00000504000 USP17L23D6RBM5 183 aa10.21□□□□□ -0.78
SNF8-203ENST00000504000 CCDC168Q8NDH2 2452 aa10.2□□□□□ -0.78
SNF8-203ENST00000504000 A0A096LPF7 62 aa10.2□□□□□ -0.78
SNF8-203ENST00000504000 KRTAP10-3P60369 221 aa10.2□□□□□ -0.78
SNF8-203ENST00000504000 RPS28P62857 69 aaKnown RBP10.2□□□□□ -0.78
SNF8-203ENST00000504000 C6orf99Q4VX62 202 aa10.2□□□□□ -0.78
SNF8-203ENST00000504000 C9orf66Q5T8R8 295 aa10.19□□□□□ -0.78
SNF8-203ENST00000504000 CUBNO60494 3623 aa10.19□□□□□ -0.78
SNF8-203ENST00000504000 SETD2Q9BYW2 2564 aaPredicted RBP10.19□□□□□ -0.78
SNF8-203ENST00000504000 UPK3BQ9BT76 320 aa10.19□□□□□ -0.78
SNF8-203ENST00000504000 LOC110117498A0A087WWA1 95 aa10.18□□□□□ -0.78
SNF8-203ENST00000504000 GVQW2A0A096LPI5 108 aaPredicted RBP10.18□□□□□ -0.78
SNF8-203ENST00000504000 APOC4P55056 127 aa10.18□□□□□ -0.78
SNF8-203ENST00000504000 hADV29S1A0JD25 119 aa10.17□□□□□ -0.78
SNF8-203ENST00000504000 ZNF561-AS1K7EIQ3 104 aa10.17□□□□□ -0.78
SNF8-203ENST00000504000 IGLV6-57P01721 117 aa10.17□□□□□ -0.78
SNF8-203ENST00000504000 LELP1Q5T871 98 aa10.17□□□□□ -0.78
SNF8-203ENST00000504000 UBL5Q9BZL1 73 aa10.17□□□□□ -0.78
SNF8-203ENST00000504000 IGLV10-54A0A075B6I4 117 aa10.17□□□□□ -0.78
SNF8-203ENST00000504000 A0A087WVE0 104 aa10.17□□□□□ -0.78
SNF8-203ENST00000504000 DAD1P61803 113 aa10.17□□□□□ -0.78
SNF8-203ENST00000504000 C9orf116Q5BN46 136 aaPredicted RBP10.17□□□□□ -0.78
SNF8-203ENST00000504000 Q8NDZ9 215 aa10.17□□□□□ -0.78
SNF8-203ENST00000504000 PRR34Q9NV39 138 aa10.17□□□□□ -0.78
SNF8-203ENST00000504000 MIFP14174 115 aa10.16□□□□□ -0.78
SNF8-203ENST00000504000 PDE6GP18545 87 aa10.16□□□□□ -0.78
SNF8-203ENST00000504000 TMEM258P61165 79 aa10.16□□□□□ -0.78
SNF8-203ENST00000504000 C6orf223Q8N319 242 aa10.16□□□□□ -0.78
SNF8-203ENST00000504000 PDZD2O15018 2839 aa10.16□□□□□ -0.78
SNF8-203ENST00000504000 J3KT08 172 aa10.15□□□□□ -0.78
SNF8-203ENST00000504000 RBM3P98179 157 aaKnown RBP10.15□□□□□ -0.78
SNF8-203ENST00000504000 SPAG11BQ08648 103 aa10.15□□□□□ -0.78
SNF8-203ENST00000504000 BCE1O60756 84 aa10.15□□□□□ -0.79
SNF8-203ENST00000504000 Q6ZQT0 140 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms