RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-215ENST00000503418 TRAV9-1A0A075B6T8 112 aa11.85□□□□□ -0.51
UBE2D3-215ENST00000503418 C9orf129Q5T035 196 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-215ENST00000503418 DIRC1Q969H9 104 aa11.85□□□□□ -0.51
UBE2D3-215ENST00000503418 CDKN2A-AS1Q9UH64 79 aa11.85□□□□□ -0.51
UBE2D3-215ENST00000503418 S100PP25815 95 aa11.84□□□□□ -0.51
UBE2D3-215ENST00000503418 SCGB3A1Q96QR1 104 aa11.84□□□□□ -0.51
UBE2D3-215ENST00000503418 ERASQ7Z444 233 aa11.83□□□□□ -0.52
UBE2D3-215ENST00000503418 LINC00469Q8N7U9 141 aa11.83□□□□□ -0.52
UBE2D3-215ENST00000503418 SEC11CQ9BY50 192 aa11.83□□□□□ -0.52
UBE2D3-215ENST00000503418 H0Y9J4 135 aa11.81□□□□□ -0.52
UBE2D3-215ENST00000503418 GNB1LQ9BYB4 327 aa11.81□□□□□ -0.52
UBE2D3-215ENST00000503418 F8VRH5 84 aa11.79□□□□□ -0.52
UBE2D3-215ENST00000503418 XAGE1AQ9HD64 81 aa11.79□□□□□ -0.52
UBE2D3-215ENST00000503418 PRR26Q8N8Z3 221 aa11.78□□□□□ -0.52
UBE2D3-215ENST00000503418 LRP2P98164 4655 aa11.77□□□□□ -0.52
UBE2D3-215ENST00000503418 TINCRA0A1B0GVN0 87 aa11.77□□□□□ -0.53
UBE2D3-215ENST00000503418 LINC01549A6NIU2 74 aa11.77□□□□□ -0.53
UBE2D3-215ENST00000503418 SMIM1B2RUZ4 78 aa11.77□□□□□ -0.53
UBE2D3-215ENST00000503418 FA2HQ7L5A8 372 aa11.77□□□□□ -0.53
UBE2D3-215ENST00000503418 SMCO4Q9NRQ5 59 aa11.77□□□□□ -0.53
UBE2D3-215ENST00000503418 LINC01546A6NGU7 62 aa11.76□□□□□ -0.53
UBE2D3-215ENST00000503418 CXCL5P42830 114 aa11.76□□□□□ -0.53
UBE2D3-215ENST00000503418 FABP9Q0Z7S8 132 aa11.76□□□□□ -0.53
UBE2D3-215ENST00000503418 COX19Q49B96 90 aa11.76□□□□□ -0.53
UBE2D3-215ENST00000503418 C10orf91Q5T1B1 145 aa11.76□□□□□ -0.53
UBE2D3-215ENST00000503418 MRPL18Q9H0U6 180 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-215ENST00000503418 CARHSP1Q9Y2V2 147 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-215ENST00000503418 C22orf24Q9Y442 160 aa11.76□□□□□ -0.53
UBE2D3-215ENST00000503418 NDUFA5Q16718 116 aa11.75□□□□□ -0.53
UBE2D3-215ENST00000503418 SLC7A5P1Q8MH63 180 aa11.75□□□□□ -0.53
UBE2D3-215ENST00000503418 RPS10P5Q9NQ39 176 aa11.75□□□□□ -0.53
UBE2D3-215ENST00000503418 PDZD11Q5EBL8 140 aa11.74□□□□□ -0.53
UBE2D3-215ENST00000503418 COX7B2Q8TF08 81 aa11.74□□□□□ -0.53
UBE2D3-215ENST00000503418 CST9LQ9H4G1 147 aa11.74□□□□□ -0.53
UBE2D3-215ENST00000503418 SPINK8P0C7L1 97 aa11.73□□□□□ -0.53
UBE2D3-215ENST00000503418 IGLV5-45A0A087WSX0 123 aa11.72□□□□□ -0.53
UBE2D3-215ENST00000503418 PMVKQ15126 192 aa11.72□□□□□ -0.53
UBE2D3-215ENST00000503418 RHEBQ15382 184 aa11.72□□□□□ -0.53
UBE2D3-215ENST00000503418 LBHQ53QV2 105 aaPredicted RBP11.72□□□□□ -0.53
UBE2D3-215ENST00000503418 APOC3P02656 99 aa11.71□□□□□ -0.53
UBE2D3-215ENST00000503418 IGLV1-50A0A075B6I6 118 aa11.7□□□□□ -0.54
UBE2D3-215ENST00000503418 KRTAP1-4P0C5Y4 121 aa11.7□□□□□ -0.54
UBE2D3-215ENST00000503418 NUPR1O60356 82 aa11.69□□□□□ -0.54
UBE2D3-215ENST00000503418 MRPL55Q7Z7F7 128 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-215ENST00000503418 SVBPQ8N300 66 aa11.69□□□□□ -0.54
UBE2D3-215ENST00000503418 ZNF861PO60384 105 aa11.68□□□□□ -0.54
UBE2D3-215ENST00000503418 NDUFA6P56556 154 aa11.68□□□□□ -0.54
UBE2D3-215ENST00000503418 RAB5BP61020 215 aa11.68□□□□□ -0.54
UBE2D3-215ENST00000503418 TP73-AS1Q9UF72 201 aa11.68□□□□□ -0.54
UBE2D3-215ENST00000503418 RNF213Q63HN8 5207 aa11.67□□□□□ -0.54
UBE2D3-215ENST00000503418 H3BRM9 83 aa11.67□□□□□ -0.54
UBE2D3-215ENST00000503418 SNAPINO95295 136 aa11.67□□□□□ -0.54
UBE2D3-215ENST00000503418 TRAPPC1Q9Y5R8 145 aa11.66□□□□□ -0.54
UBE2D3-215ENST00000503418 A0A096LNJ9 63 aa11.64□□□□□ -0.55
UBE2D3-215ENST00000503418 RPL37AP8A6NKH3 93 aa11.64□□□□□ -0.55
UBE2D3-215ENST00000503418 ATP5LO75964 103 aa11.64□□□□□ -0.55
UBE2D3-215ENST00000503418 RPL13AP40429 203 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-215ENST00000503418 C18orf32Q8TCD1 76 aa11.64□□□□□ -0.55
UBE2D3-215ENST00000503418 LINC00167Q96N53 147 aa11.64□□□□□ -0.55
UBE2D3-215ENST00000503418 GAGE10A6NGK3 116 aa11.63□□□□□ -0.55
UBE2D3-215ENST00000503418 LINC00614P0C842 121 aa11.63□□□□□ -0.55
UBE2D3-215ENST00000503418 IGLC3P0DOY3 106 aa11.63□□□□□ -0.55
UBE2D3-215ENST00000503418 PMCHL1Q16048 86 aa11.63□□□□□ -0.55
UBE2D3-215ENST00000503418 BCE1O60756 84 aa11.62□□□□□ -0.55
UBE2D3-215ENST00000503418 URB1-AS1Q96HZ7 61 aa11.62□□□□□ -0.55
UBE2D3-215ENST00000503418 HBDP02042 147 aa11.61□□□□□ -0.55
UBE2D3-215ENST00000503418 ZNF22P17026 224 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-215ENST00000503418 RPL28P46779 137 aaKnown RBP11.61□□□□□ -0.55
UBE2D3-215ENST00000503418 NKAPP1Q8N9T2 125 aa11.61□□□□□ -0.55
UBE2D3-215ENST00000503418 PFN2P35080 140 aa11.6□□□□□ -0.55
UBE2D3-215ENST00000503418 IGLV5-39A0A0G2JS06 123 aa11.59□□□□□ -0.55
UBE2D3-215ENST00000503418 IGLV5-37A0A075B6J1 123 aa11.58□□□□□ -0.56
UBE2D3-215ENST00000503418 LPAP08519 4548 aa11.57□□□□□ -0.56
UBE2D3-215ENST00000503418 BAGE3Q86Y29 109 aa11.56□□□□□ -0.56
UBE2D3-215ENST00000503418 IGKV2-28A0A075B6P5 120 aa11.55□□□□□ -0.56
UBE2D3-215ENST00000503418 SCO1O75880 301 aa11.55□□□□□ -0.56
UBE2D3-215ENST00000503418 IGKV2D-28P01615 120 aa11.55□□□□□ -0.56
UBE2D3-215ENST00000503418 UBE2AP49459 152 aa11.55□□□□□ -0.56
UBE2D3-215ENST00000503418 TMEM170BQ5T4T1 132 aa11.55□□□□□ -0.56
UBE2D3-215ENST00000503418 ZNF625Q96I27 306 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-215ENST00000503418 ERG28Q9UKR5 140 aa11.55□□□□□ -0.56
UBE2D3-215ENST00000503418 C11orf86A6NJI1 115 aa11.54□□□□□ -0.56
UBE2D3-215ENST00000503418 A0A087X002 238 aa11.52□□□□□ -0.57
UBE2D3-215ENST00000503418 PRR4Q16378 134 aa11.52□□□□□ -0.57
UBE2D3-215ENST00000503418 SND1-IT1Q9HBX3 110 aa11.52□□□□□ -0.57
UBE2D3-215ENST00000503418 CHTOPQ9Y3Y2 248 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-215ENST00000503418 CRYGAP11844 174 aa11.5□□□□□ -0.57
UBE2D3-215ENST00000503418 VPREB1P12018 145 aa11.5□□□□□ -0.57
UBE2D3-215ENST00000503418 COX17Q14061 63 aa11.5□□□□□ -0.57
UBE2D3-215ENST00000503418 TSPAN13O95857 204 aa11.49□□□□□ -0.57
UBE2D3-215ENST00000503418 KRTAP13-1Q8IUC0 172 aa11.49□□□□□ -0.57
UBE2D3-215ENST00000503418 CBLN2Q8IUK8 224 aa11.49□□□□□ -0.57
UBE2D3-215ENST00000503418 TYMSOSQ8TAI1 123 aa11.49□□□□□ -0.57
UBE2D3-215ENST00000503418 ANAPC11Q9NYG5 84 aa11.49□□□□□ -0.57
UBE2D3-215ENST00000503418 RPL24P83731 157 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-215ENST00000503418 SFTA2Q6UW10 78 aa11.48□□□□□ -0.57
UBE2D3-215ENST00000503418 PRLHP81277 87 aa11.46□□□□□ -0.57
UBE2D3-215ENST00000503418 FAM19A1Q7Z5A9 133 aa11.46□□□□□ -0.57
UBE2D3-215ENST00000503418 IFI27L1Q96BM0 104 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms