RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 KRTAP10-3P60369 221 aa11.52□□□□□ -0.57
COL6A1-206ENST00000498614 TMEM243Q9BU79 118 aa11.52□□□□□ -0.57
COL6A1-206ENST00000498614 PPDPFQ9H3Y8 114 aa11.52□□□□□ -0.57
COL6A1-206ENST00000498614 UBE2L6O14933 153 aa11.51□□□□□ -0.57
COL6A1-206ENST00000498614 INAFM2P0DMQ5 153 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 CSNK1G2-AS1Q8NCQ2 148 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 COX7B2Q8TF08 81 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 TMEM126AQ9H061 195 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 PF4P02776 101 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 SND1-IT1Q9HBX3 110 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 TOMM7Q9P0U1 55 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 A0A087WYN8 130 aa11.49□□□□□ -0.57
COL6A1-206ENST00000498614 C5orf38Q86SI9 138 aa11.49□□□□□ -0.57
COL6A1-206ENST00000498614 VWFP04275 2813 aa11.49□□□□□ -0.57
COL6A1-206ENST00000498614 TRGV4A0A0C4DH28 118 aa11.49□□□□□ -0.57
COL6A1-206ENST00000498614 IGKV3OR2-268A0A0C4DH90 116 aa11.49□□□□□ -0.57
COL6A1-206ENST00000498614 C9orf129Q5T035 196 aaKnown RBP11.49□□□□□ -0.57
COL6A1-206ENST00000498614 C3orf22Q8N5N4 141 aa11.49□□□□□ -0.57
COL6A1-206ENST00000498614 SMIM11BQ8TCY0 68 aa11.48□□□□□ -0.57
COL6A1-206ENST00000498614 C9orf153Q5TBE3 101 aa11.48□□□□□ -0.57
COL6A1-206ENST00000498614 CXCL5P42830 114 aa11.47□□□□□ -0.57
COL6A1-206ENST00000498614 LINC00158P58513 81 aa11.47□□□□□ -0.57
COL6A1-206ENST00000498614 OVOL2Q9BRP0 275 aa11.47□□□□□ -0.57
COL6A1-206ENST00000498614 TRBV6-4A0A1B0GX49 114 aa11.46□□□□□ -0.57
COL6A1-206ENST00000498614 CCL18P55774 89 aa11.46□□□□□ -0.58
COL6A1-206ENST00000498614 IGLV4-60A0A075B6I1 120 aa11.45□□□□□ -0.58
COL6A1-206ENST00000498614 UQCRQO14949 82 aa11.45□□□□□ -0.58
COL6A1-206ENST00000498614 DNAL4O96015 105 aa11.45□□□□□ -0.58
COL6A1-206ENST00000498614 KRTAP24-1Q3LI83 254 aa11.45□□□□□ -0.58
COL6A1-206ENST00000498614 C14orf132Q9NPU4 83 aa11.45□□□□□ -0.58
COL6A1-206ENST00000498614 ATP5G1P05496 136 aa11.44□□□□□ -0.58
COL6A1-206ENST00000498614 FHL2Q14192 279 aa11.44□□□□□ -0.58
COL6A1-206ENST00000498614 STAB1Q9NY15 2570 aa11.43□□□□□ -0.58
COL6A1-206ENST00000498614 LINC00526Q96FQ7 95 aa11.43□□□□□ -0.58
COL6A1-206ENST00000498614 COL6A5A8TX70 2615 aa11.43□□□□□ -0.58
COL6A1-206ENST00000498614 DEFB130BP0DP73 79 aa11.42□□□□□ -0.58
COL6A1-206ENST00000498614 DEFB130AP0DP74 79 aa11.42□□□□□ -0.58
COL6A1-206ENST00000498614 PFN2P35080 140 aa11.42□□□□□ -0.58
COL6A1-206ENST00000498614 IGHV3OR16-9A0A0B4J2B5 98 aa11.41□□□□□ -0.58
COL6A1-206ENST00000498614 HIST1H4AP62805 103 aaKnown RBP11.41□□□□□ -0.58
COL6A1-206ENST00000498614 KLK5Q9Y337 293 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-206ENST00000498614 LECT2O14960 151 aa11.4□□□□□ -0.58
COL6A1-206ENST00000498614 C2orf48Q96LS8 159 aa11.4□□□□□ -0.58
COL6A1-206ENST00000498614 TRBV6-8A0A0A6YYG3 113 aa11.4□□□□□ -0.58
COL6A1-206ENST00000498614 H0YGX0 51 aa11.4□□□□□ -0.58
COL6A1-206ENST00000498614 COX7CP15954 63 aa11.4□□□□□ -0.58
COL6A1-206ENST00000498614 OBSCN-AS1Q96MR7 158 aa11.4□□□□□ -0.58
COL6A1-206ENST00000498614 IGKV3D-7A0A0C4DH55 119 aa11.39□□□□□ -0.59
COL6A1-206ENST00000498614 IBA57-AS1B1ANH7 110 aa11.39□□□□□ -0.59
COL6A1-206ENST00000498614 PAX4O43316 350 aa11.39□□□□□ -0.59
COL6A1-206ENST00000498614 SLPIP03973 132 aa11.39□□□□□ -0.59
COL6A1-206ENST00000498614 LINC00846Q9NV44 126 aa11.39□□□□□ -0.59
COL6A1-206ENST00000498614 NCR3O14931 201 aa11.38□□□□□ -0.59
COL6A1-206ENST00000498614 A0A087WZ39 114 aa11.38□□□□□ -0.59
COL6A1-206ENST00000498614 LINC00482Q8N8I6 264 aa11.38□□□□□ -0.59
COL6A1-206ENST00000498614 OR13C6PQ8NH95 151 aa11.38□□□□□ -0.59
COL6A1-206ENST00000498614 SPATA3Q8NHX4 192 aa11.38□□□□□ -0.59
COL6A1-206ENST00000498614 C11orf68Q9H3H3 251 aaKnown RBP11.38□□□□□ -0.59
COL6A1-206ENST00000498614 ATOX1O00244 68 aa11.35□□□□□ -0.59
COL6A1-206ENST00000498614 Q6JHZ5 121 aa11.34□□□□□ -0.59
COL6A1-206ENST00000498614 GYPEP15421 78 aa11.34□□□□□ -0.59
COL6A1-206ENST00000498614 KIR2DL5BQ8NHK3 375 aa11.34□□□□□ -0.59
COL6A1-206ENST00000498614 A0A087WVE0 104 aa11.33□□□□□ -0.6
COL6A1-206ENST00000498614 RPL18AQ02543 176 aaKnown RBP11.33□□□□□ -0.6
COL6A1-206ENST00000498614 LINC00959A0A1B0GUT2 108 aa11.33□□□□□ -0.6
COL6A1-206ENST00000498614 CRYGAP11844 174 aa11.33□□□□□ -0.6
COL6A1-206ENST00000498614 X6R8D5 127 aa11.33□□□□□ -0.6
COL6A1-206ENST00000498614 LOC107984640A0A0U1RRK4 108 aa11.32□□□□□ -0.6
COL6A1-206ENST00000498614 SS18Q15532 418 aa11.32□□□□□ -0.6
COL6A1-206ENST00000498614 C6orf226Q5I0X4 101 aa11.32□□□□□ -0.6
COL6A1-206ENST00000498614 CYSTM1Q9H1C7 97 aa11.32□□□□□ -0.6
COL6A1-206ENST00000498614 A0A096LPF7 62 aa11.32□□□□□ -0.6
COL6A1-206ENST00000498614 hADV29S1A0JD25 119 aa11.32□□□□□ -0.6
COL6A1-206ENST00000498614 LINC00612Q8N6U2 182 aa11.31□□□□□ -0.6
COL6A1-206ENST00000498614 NBEAL2Q6ZNJ1 2754 aa11.31□□□□□ -0.6
COL6A1-206ENST00000498614 A0A1B0GX51 115 aa11.31□□□□□ -0.6
COL6A1-206ENST00000498614 PKD1L1Q8TDX9 2849 aa11.31□□□□□ -0.6
COL6A1-206ENST00000498614 XCL1P47992 114 aa11.3□□□□□ -0.6
COL6A1-206ENST00000498614 ORMDL1Q9P0S3 153 aa11.3□□□□□ -0.6
COL6A1-206ENST00000498614 LINC01561Q8N1V8 128 aa11.3□□□□□ -0.6
COL6A1-206ENST00000498614 DEFB4AO15263 64 aa11.28□□□□□ -0.6
COL6A1-206ENST00000498614 PRR3P79522 188 aaKnown RBP11.28□□□□□ -0.6
COL6A1-206ENST00000498614 CLPSL2Q6UWE3 100 aa11.28□□□□□ -0.6
COL6A1-206ENST00000498614 NANOS2P60321 138 aaKnown RBP11.27□□□□□ -0.6
COL6A1-206ENST00000498614 PRO0255Q9UI72 69 aa11.27□□□□□ -0.61
COL6A1-206ENST00000498614 CCKP06307 115 aa11.26□□□□□ -0.61
COL6A1-206ENST00000498614 DEFB135Q30KP9 77 aa11.26□□□□□ -0.61
COL6A1-206ENST00000498614 USP17L23D6RBM5 183 aa11.25□□□□□ -0.61
COL6A1-206ENST00000498614 C9orf66Q5T8R8 295 aa11.25□□□□□ -0.61
COL6A1-206ENST00000498614 LINC00167Q96N53 147 aa11.25□□□□□ -0.61
COL6A1-206ENST00000498614 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
COL6A1-206ENST00000498614 SERP2Q8N6R1 65 aa11.25□□□□□ -0.61
COL6A1-206ENST00000498614 CMYA5Q8N3K9 4069 aa11.24□□□□□ -0.61
COL6A1-206ENST00000498614 J3KT08 172 aa11.24□□□□□ -0.61
COL6A1-206ENST00000498614 Q8IZM0 81 aa11.24□□□□□ -0.61
COL6A1-206ENST00000498614 MDFIQ99750 246 aa11.24□□□□□ -0.61
COL6A1-206ENST00000498614 UPK3BQ9BT76 320 aa11.24□□□□□ -0.61
COL6A1-206ENST00000498614 Q8N814 137 aa11.23□□□□□ -0.61
COL6A1-206ENST00000498614 A0A1B0GUV1 79 aa11.22□□□□□ -0.61
COL6A1-206ENST00000498614 LYRM9A8MSI8 78 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms