RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 CDKN2A-AS1Q9UH64 79 aa7.1□□□□□ -1.27
HLA-DQA1-207ENST00000496318 Q6ZN92 141 aa7.09□□□□□ -1.27
HLA-DQA1-207ENST00000496318 NXT2Q9NPJ8 142 aaKnown RBP7.09□□□□□ -1.27
HLA-DQA1-207ENST00000496318 M0QXV9 152 aa7.08□□□□□ -1.28
HLA-DQA1-207ENST00000496318 TLX1NBP0CAT3 122 aa7.08□□□□□ -1.28
HLA-DQA1-207ENST00000496318 S100A1P23297 94 aa7.08□□□□□ -1.28
HLA-DQA1-207ENST00000496318 TOMM6Q96B49 74 aa7.08□□□□□ -1.28
HLA-DQA1-207ENST00000496318 ALKBH7Q9BT30 221 aaPredicted RBP7.08□□□□□ -1.28
HLA-DQA1-207ENST00000496318 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
HLA-DQA1-207ENST00000496318 RHEBQ15382 184 aa7.07□□□□□ -1.28
HLA-DQA1-207ENST00000496318 SCGB3A1Q96QR1 104 aa7.07□□□□□ -1.28
HLA-DQA1-207ENST00000496318 XAGE1AQ9HD64 81 aa7.07□□□□□ -1.28
HLA-DQA1-207ENST00000496318 RPS10P5Q9NQ39 176 aa7.07□□□□□ -1.28
HLA-DQA1-207ENST00000496318 RNF213Q63HN8 5207 aa7.07□□□□□ -1.28
HLA-DQA1-207ENST00000496318 TRBV30A0A0K0K1B3 111 aa7.06□□□□□ -1.28
HLA-DQA1-207ENST00000496318 ATP6V1G1O75348 118 aa7.06□□□□□ -1.28
HLA-DQA1-207ENST00000496318 PRSS2P07478 247 aa7.06□□□□□ -1.28
HLA-DQA1-207ENST00000496318 REG3GQ6UW15 175 aa7.06□□□□□ -1.28
HLA-DQA1-207ENST00000496318 PACRGQ96M98 296 aaPredicted RBP7.06□□□□□ -1.28
HLA-DQA1-207ENST00000496318 TIMM17AQ99595 171 aa7.06□□□□□ -1.28
HLA-DQA1-207ENST00000496318 SMIM1B2RUZ4 78 aa7.05□□□□□ -1.28
HLA-DQA1-207ENST00000496318 NDUFC2-KCTD14E9PQ53 114 aa7.05□□□□□ -1.28
HLA-DQA1-207ENST00000496318 IGLV7-43P04211 117 aa7.05□□□□□ -1.28
HLA-DQA1-207ENST00000496318 SPINK8P0C7L1 97 aa7.05□□□□□ -1.28
HLA-DQA1-207ENST00000496318 FABP9Q0Z7S8 132 aa7.05□□□□□ -1.28
HLA-DQA1-207ENST00000496318 PMCHL1Q16048 86 aa7.05□□□□□ -1.28
HLA-DQA1-207ENST00000496318 FAM19A3Q7Z5A8 133 aa7.05□□□□□ -1.28
HLA-DQA1-207ENST00000496318 URB1-AS1Q96HZ7 61 aa7.05□□□□□ -1.28
HLA-DQA1-207ENST00000496318 GNB1LQ9BYB4 327 aa7.05□□□□□ -1.28
HLA-DQA1-207ENST00000496318 GEMIN7Q9H840 131 aaKnown RBP7.05□□□□□ -1.28
HLA-DQA1-207ENST00000496318 LPAP08519 4548 aa7.05□□□□□ -1.28
HLA-DQA1-207ENST00000496318 F8WDY8 70 aa7.04□□□□□ -1.28
HLA-DQA1-207ENST00000496318 S100PP25815 95 aa7.04□□□□□ -1.28
HLA-DQA1-207ENST00000496318 CKS1BP61024 79 aa7.04□□□□□ -1.28
HLA-DQA1-207ENST00000496318 UBE2BP63146 152 aa7.04□□□□□ -1.28
HLA-DQA1-207ENST00000496318 COX19Q49B96 90 aa7.04□□□□□ -1.28
HLA-DQA1-207ENST00000496318 C6orf226Q5I0X4 101 aa7.04□□□□□ -1.28
HLA-DQA1-207ENST00000496318 ERASQ7Z444 233 aa7.04□□□□□ -1.28
HLA-DQA1-207ENST00000496318 SVBPQ8N300 66 aa7.04□□□□□ -1.28
HLA-DQA1-207ENST00000496318 PRR26Q8N8Z3 221 aa7.04□□□□□ -1.28
HLA-DQA1-207ENST00000496318 A0A096LNJ9 63 aa7.03□□□□□ -1.28
HLA-DQA1-207ENST00000496318 K7EMI3 77 aa7.03□□□□□ -1.28
HLA-DQA1-207ENST00000496318 SNAPINO95295 136 aa7.03□□□□□ -1.28
HLA-DQA1-207ENST00000496318 HERVK_113P63121 156 aa7.03□□□□□ -1.28
HLA-DQA1-207ENST00000496318 Q8IZM0 81 aa7.03□□□□□ -1.28
HLA-DQA1-207ENST00000496318 LINC01561Q8N1V8 128 aa7.03□□□□□ -1.28
HLA-DQA1-207ENST00000496318 LINC01546A6NGU7 62 aa7.02□□□□□ -1.29
HLA-DQA1-207ENST00000496318 FA2HQ7L5A8 372 aa7.02□□□□□ -1.29
HLA-DQA1-207ENST00000496318 CST9LQ9H4G1 147 aa7.02□□□□□ -1.29
HLA-DQA1-207ENST00000496318 SLC7A5P1Q8MH63 180 aa7.01□□□□□ -1.29
HLA-DQA1-207ENST00000496318 COX7B2Q8TF08 81 aa7.01□□□□□ -1.29
HLA-DQA1-207ENST00000496318 TINCRA0A1B0GVN0 87 aa7□□□□□ -1.29
HLA-DQA1-207ENST00000496318 H0Y9J4 135 aa7□□□□□ -1.29
HLA-DQA1-207ENST00000496318 SCO1O75880 301 aa7□□□□□ -1.29
HLA-DQA1-207ENST00000496318 APOC3P02656 99 aa7□□□□□ -1.29
HLA-DQA1-207ENST00000496318 NPSP0C0P6 89 aa7□□□□□ -1.29
HLA-DQA1-207ENST00000496318 KRTAP1-4P0C5Y4 121 aa7□□□□□ -1.29
HLA-DQA1-207ENST00000496318 RAB5BP61020 215 aa7□□□□□ -1.29
HLA-DQA1-207ENST00000496318 C18orf32Q8TCD1 76 aa7□□□□□ -1.29
HLA-DQA1-207ENST00000496318 SMCO4Q9NRQ5 59 aa7□□□□□ -1.29
HLA-DQA1-207ENST00000496318 C22orf24Q9Y442 160 aa7□□□□□ -1.29
HLA-DQA1-207ENST00000496318 IGLV5-45A0A087WSX0 123 aa6.99□□□□□ -1.29
HLA-DQA1-207ENST00000496318 GAGE10A6NGK3 116 aa6.99□□□□□ -1.29
HLA-DQA1-207ENST00000496318 F8VRH5 84 aa6.99□□□□□ -1.29
HLA-DQA1-207ENST00000496318 NDUFA6P56556 154 aa6.99□□□□□ -1.29
HLA-DQA1-207ENST00000496318 PAPPA-AS1Q5QFB9 102 aa6.99□□□□□ -1.29
HLA-DQA1-207ENST00000496318 RPL37AP8A6NKH3 93 aa6.98□□□□□ -1.29
HLA-DQA1-207ENST00000496318 SEC11AP67812 179 aa6.98□□□□□ -1.29
HLA-DQA1-207ENST00000496318 PMVKQ15126 192 aa6.98□□□□□ -1.29
HLA-DQA1-207ENST00000496318 DIRC1Q969H9 104 aa6.98□□□□□ -1.29
HLA-DQA1-207ENST00000496318 TRAPPC1Q9Y5R8 145 aa6.98□□□□□ -1.29
HLA-DQA1-207ENST00000496318 PDZD11Q5EBL8 140 aa6.97□□□□□ -1.29
HLA-DQA1-207ENST00000496318 ZNF22P17026 224 aaPredicted RBP6.96□□□□□ -1.3
HLA-DQA1-207ENST00000496318 G0S2P27469 103 aa6.96□□□□□ -1.3
HLA-DQA1-207ENST00000496318 C11orf86A6NJI1 115 aa6.95□□□□□ -1.3
HLA-DQA1-207ENST00000496318 IGLC3P0DOY3 106 aa6.95□□□□□ -1.3
HLA-DQA1-207ENST00000496318 PFN2P35080 140 aa6.95□□□□□ -1.3
HLA-DQA1-207ENST00000496318 MRPL55Q7Z7F7 128 aaKnown RBP6.95□□□□□ -1.3
HLA-DQA1-207ENST00000496318 ZNF625Q96I27 306 aaPredicted RBP6.95□□□□□ -1.3
HLA-DQA1-207ENST00000496318 LINC00167Q96N53 147 aa6.95□□□□□ -1.3
HLA-DQA1-207ENST00000496318 LINC01549A6NIU2 74 aa6.94□□□□□ -1.3
HLA-DQA1-207ENST00000496318 HBDP02042 147 aa6.94□□□□□ -1.3
HLA-DQA1-207ENST00000496318 CXCL5P42830 114 aa6.94□□□□□ -1.3
HLA-DQA1-207ENST00000496318 Q8NDZ9 215 aa6.94□□□□□ -1.3
HLA-DQA1-207ENST00000496318 YPEL4Q96NS1 127 aa6.94□□□□□ -1.3
HLA-DQA1-207ENST00000496318 LINC00614P0C842 121 aa6.93□□□□□ -1.3
HLA-DQA1-207ENST00000496318 CBLN2Q8IUK8 224 aa6.93□□□□□ -1.3
HLA-DQA1-207ENST00000496318 ANAPC11Q9NYG5 84 aa6.93□□□□□ -1.3
HLA-DQA1-207ENST00000496318 IGKV2-28A0A075B6P5 120 aa6.92□□□□□ -1.3
HLA-DQA1-207ENST00000496318 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
HLA-DQA1-207ENST00000496318 IGKV2D-28P01615 120 aa6.92□□□□□ -1.3
HLA-DQA1-207ENST00000496318 A0A087X002 238 aa6.91□□□□□ -1.3
HLA-DQA1-207ENST00000496318 H3BRM9 83 aa6.91□□□□□ -1.3
HLA-DQA1-207ENST00000496318 ZNF861PO60384 105 aa6.91□□□□□ -1.3
HLA-DQA1-207ENST00000496318 BAGE3Q86Y29 109 aa6.91□□□□□ -1.3
HLA-DQA1-207ENST00000496318 A0A0U1RRA0 63 aa6.9□□□□□ -1.3
HLA-DQA1-207ENST00000496318 ATP5LO75964 103 aa6.9□□□□□ -1.3
HLA-DQA1-207ENST00000496318 TMEM170BQ5T4T1 132 aa6.9□□□□□ -1.3
HLA-DQA1-207ENST00000496318 TMEM238C9JI98 176 aa6.89□□□□□ -1.31
HLA-DQA1-207ENST00000496318 BCE1O60756 84 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms