RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 C6orf226Q5I0X4 101 aa4.4□□□□□ -1.71
VPS52-221ENST00000495755 ERASQ7Z444 233 aa4.4□□□□□ -1.71
VPS52-221ENST00000495755 FAM19A5Q7Z5A7 132 aaPredicted RBP4.4□□□□□ -1.71
VPS52-221ENST00000495755 Q8IZM0 81 aa4.4□□□□□ -1.71
VPS52-221ENST00000495755 PACRGQ96M98 296 aaPredicted RBP4.4□□□□□ -1.71
VPS52-221ENST00000495755 SCGB3A1Q96QR1 104 aa4.4□□□□□ -1.71
VPS52-221ENST00000495755 CDKN2A-AS1Q9UH64 79 aa4.4□□□□□ -1.71
VPS52-221ENST00000495755 CKS1BP61024 79 aa4.39□□□□□ -1.71
VPS52-221ENST00000495755 COX19Q49B96 90 aa4.39□□□□□ -1.71
VPS52-221ENST00000495755 COMMD7Q86VX2 200 aa4.39□□□□□ -1.71
VPS52-221ENST00000495755 GEMIN7Q9H840 131 aaKnown RBP4.39□□□□□ -1.71
VPS52-221ENST00000495755 TOMM7Q9P0U1 55 aa4.39□□□□□ -1.71
VPS52-221ENST00000495755 CARHSP1Q9Y2V2 147 aaKnown RBP4.39□□□□□ -1.71
VPS52-221ENST00000495755 IGLV5-45A0A087WSX0 123 aa4.38□□□□□ -1.71
VPS52-221ENST00000495755 TINCRA0A1B0GVN0 87 aa4.38□□□□□ -1.71
VPS52-221ENST00000495755 LINC01549A6NIU2 74 aa4.38□□□□□ -1.71
VPS52-221ENST00000495755 M0QXV9 152 aa4.38□□□□□ -1.71
VPS52-221ENST00000495755 RHEBQ15382 184 aa4.38□□□□□ -1.71
VPS52-221ENST00000495755 DIRC1Q969H9 104 aa4.38□□□□□ -1.71
VPS52-221ENST00000495755 MRPL18Q9H0U6 180 aaKnown RBP4.38□□□□□ -1.71
VPS52-221ENST00000495755 CST9LQ9H4G1 147 aa4.38□□□□□ -1.71
VPS52-221ENST00000495755 SMIM1B2RUZ4 78 aa4.37□□□□□ -1.71
VPS52-221ENST00000495755 F8VRH5 84 aa4.37□□□□□ -1.71
VPS52-221ENST00000495755 H0Y9J4 135 aa4.37□□□□□ -1.71
VPS52-221ENST00000495755 FABP9Q0Z7S8 132 aa4.37□□□□□ -1.71
VPS52-221ENST00000495755 PDZD11Q5EBL8 140 aa4.37□□□□□ -1.71
VPS52-221ENST00000495755 LINC00469Q8N7U9 141 aa4.37□□□□□ -1.71
VPS52-221ENST00000495755 RPS10P5Q9NQ39 176 aa4.37□□□□□ -1.71
VPS52-221ENST00000495755 CXCL5P42830 114 aa4.36□□□□□ -1.71
VPS52-221ENST00000495755 UBE2BP63146 152 aa4.36□□□□□ -1.71
VPS52-221ENST00000495755 PMVKQ15126 192 aa4.36□□□□□ -1.71
VPS52-221ENST00000495755 FA2HQ7L5A8 372 aa4.36□□□□□ -1.71
VPS52-221ENST00000495755 URB1-AS1Q96HZ7 61 aa4.36□□□□□ -1.71
VPS52-221ENST00000495755 XAGE1AQ9HD64 81 aa4.36□□□□□ -1.71
VPS52-221ENST00000495755 C22orf24Q9Y442 160 aa4.36□□□□□ -1.71
VPS52-221ENST00000495755 LPAP08519 4548 aa4.35□□□□□ -1.71
VPS52-221ENST00000495755 A0A096LNJ9 63 aa4.35□□□□□ -1.71
VPS52-221ENST00000495755 KRTAP1-4P0C5Y4 121 aa4.35□□□□□ -1.71
VPS52-221ENST00000495755 LBHQ53QV2 105 aaPredicted RBP4.35□□□□□ -1.71
VPS52-221ENST00000495755 PRR26Q8N8Z3 221 aa4.35□□□□□ -1.71
VPS52-221ENST00000495755 COX7B2Q8TF08 81 aa4.35□□□□□ -1.71
VPS52-221ENST00000495755 SMCO4Q9NRQ5 59 aa4.35□□□□□ -1.71
VPS52-221ENST00000495755 SPINK8P0C7L1 97 aa4.34□□□□□ -1.71
VPS52-221ENST00000495755 LINC00614P0C842 121 aa4.34□□□□□ -1.71
VPS52-221ENST00000495755 IGLC3P0DOY3 106 aa4.34□□□□□ -1.71
VPS52-221ENST00000495755 C18orf32Q8TCD1 76 aa4.34□□□□□ -1.71
VPS52-221ENST00000495755 TP73-AS1Q9UF72 201 aa4.34□□□□□ -1.71
VPS52-221ENST00000495755 TRAPPC1Q9Y5R8 145 aa4.34□□□□□ -1.71
VPS52-221ENST00000495755 IGLV1-50A0A075B6I6 118 aa4.33□□□□□ -1.72
VPS52-221ENST00000495755 IGLV5-39A0A0G2JS06 123 aa4.33□□□□□ -1.72
VPS52-221ENST00000495755 H3BRM9 83 aa4.33□□□□□ -1.72
VPS52-221ENST00000495755 NUPR1O60356 82 aa4.33□□□□□ -1.72
VPS52-221ENST00000495755 ZNF861PO60384 105 aa4.33□□□□□ -1.72
VPS52-221ENST00000495755 MRPL55Q7Z7F7 128 aaKnown RBP4.33□□□□□ -1.72
VPS52-221ENST00000495755 IGLV5-37A0A075B6J1 123 aa4.32□□□□□ -1.72
VPS52-221ENST00000495755 HBDP02042 147 aa4.32□□□□□ -1.72
VPS52-221ENST00000495755 APOC3P02656 99 aa4.32□□□□□ -1.72
VPS52-221ENST00000495755 ZNF22P17026 224 aaPredicted RBP4.32□□□□□ -1.72
VPS52-221ENST00000495755 RAB5BP61020 215 aa4.32□□□□□ -1.72
VPS52-221ENST00000495755 PMCHL1Q16048 86 aa4.32□□□□□ -1.72
VPS52-221ENST00000495755 BCE1O60756 84 aa4.31□□□□□ -1.72
VPS52-221ENST00000495755 ATP5LO75964 103 aa4.31□□□□□ -1.72
VPS52-221ENST00000495755 SNAPINO95295 136 aa4.31□□□□□ -1.72
VPS52-221ENST00000495755 NDUFA6P56556 154 aa4.31□□□□□ -1.72
VPS52-221ENST00000495755 SVBPQ8N300 66 aa4.31□□□□□ -1.72
VPS52-221ENST00000495755 LINC00167Q96N53 147 aa4.31□□□□□ -1.72
VPS52-221ENST00000495755 YPEL4Q96NS1 127 aa4.31□□□□□ -1.72
VPS52-221ENST00000495755 RPL37AP8A6NKH3 93 aa4.3□□□□□ -1.72
VPS52-221ENST00000495755 NDUFA5Q16718 116 aa4.3□□□□□ -1.72
VPS52-221ENST00000495755 BAGE3Q86Y29 109 aa4.3□□□□□ -1.72
VPS52-221ENST00000495755 GAGE10A6NGK3 116 aa4.29□□□□□ -1.72
VPS52-221ENST00000495755 C11orf86A6NJI1 115 aa4.29□□□□□ -1.72
VPS52-221ENST00000495755 PFN2P35080 140 aa4.29□□□□□ -1.72
VPS52-221ENST00000495755 RPL13AP40429 203 aaKnown RBP4.29□□□□□ -1.72
VPS52-221ENST00000495755 RPL28P46779 137 aaKnown RBP4.29□□□□□ -1.72
VPS52-221ENST00000495755 KRTAP13-1Q8IUC0 172 aa4.29□□□□□ -1.72
VPS52-221ENST00000495755 ERG28Q9UKR5 140 aa4.29□□□□□ -1.72
VPS52-221ENST00000495755 SCO1O75880 301 aa4.28□□□□□ -1.72
VPS52-221ENST00000495755 COX17Q14061 63 aa4.28□□□□□ -1.72
VPS52-221ENST00000495755 NKAPP1Q8N9T2 125 aa4.28□□□□□ -1.72
VPS52-221ENST00000495755 CHCHD1Q96BP2 118 aaKnown RBP4.28□□□□□ -1.72
VPS52-221ENST00000495755 ZNF625Q96I27 306 aaPredicted RBP4.28□□□□□ -1.72
VPS52-221ENST00000495755 SND1-IT1Q9HBX3 110 aa4.28□□□□□ -1.72
VPS52-221ENST00000495755 MUC2Q02817 5179 aa4.28□□□□□ -1.72
VPS52-221ENST00000495755 TRAV12-1A0A0B4J245 112 aa4.27□□□□□ -1.73
VPS52-221ENST00000495755 VPREB1P12018 145 aa4.27□□□□□ -1.73
VPS52-221ENST00000495755 TMEM170BQ5T4T1 132 aa4.27□□□□□ -1.73
VPS52-221ENST00000495755 SFTA2Q6UW10 78 aa4.27□□□□□ -1.73
VPS52-221ENST00000495755 Q8NDZ9 215 aa4.27□□□□□ -1.73
VPS52-221ENST00000495755 CHTOPQ9Y3Y2 248 aaKnown RBP4.27□□□□□ -1.73
VPS52-221ENST00000495755 IGKV2-28A0A075B6P5 120 aa4.26□□□□□ -1.73
VPS52-221ENST00000495755 A0A087X002 238 aa4.26□□□□□ -1.73
VPS52-221ENST00000495755 TMEM223A0PJW6 202 aa4.26□□□□□ -1.73
VPS52-221ENST00000495755 IGKV2D-28P01615 120 aa4.26□□□□□ -1.73
VPS52-221ENST00000495755 RPL24P83731 157 aaKnown RBP4.26□□□□□ -1.73
VPS52-221ENST00000495755 IFI27L1Q96BM0 104 aa4.26□□□□□ -1.73
VPS52-221ENST00000495755 CRYGAP11844 174 aa4.25□□□□□ -1.73
VPS52-221ENST00000495755 CBLN2Q8IUK8 224 aa4.25□□□□□ -1.73
VPS52-221ENST00000495755 ANAPC11Q9NYG5 84 aa4.25□□□□□ -1.73
VPS52-221ENST00000495755 TMEM238C9JI98 176 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms