RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 CFC1BP0CG36 223 aa11.14□□□□□ -0.63
CBX4-204ENST00000495122 CFC1P0CG37 223 aa11.14□□□□□ -0.63
CBX4-204ENST00000495122 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
CBX4-204ENST00000495122 CD164L2Q6UWJ8 174 aa11.13□□□□□ -0.63
CBX4-204ENST00000495122 VPS13DQ5THJ4 4388 aa11.12□□□□□ -0.63
CBX4-204ENST00000495122 APOMO95445 188 aa11.12□□□□□ -0.63
CBX4-204ENST00000495122 LYPD5Q6UWN5 251 aa11.11□□□□□ -0.63
CBX4-204ENST00000495122 Q8IZM0 81 aa11.11□□□□□ -0.63
CBX4-204ENST00000495122 C11orf45Q8TAV5 145 aa11.11□□□□□ -0.63
CBX4-204ENST00000495122 IGKV3OR2-268A0A0C4DH90 116 aa11.1□□□□□ -0.63
CBX4-204ENST00000495122 TSPAN13O95857 204 aa11.1□□□□□ -0.63
CBX4-204ENST00000495122 LY6G6CO95867 125 aa11.1□□□□□ -0.63
CBX4-204ENST00000495122 ANGP03950 147 aaKnown RBP11.1□□□□□ -0.63
CBX4-204ENST00000495122 PRSS2P07478 247 aa11.1□□□□□ -0.63
CBX4-204ENST00000495122 CXCL5P42830 114 aa11.1□□□□□ -0.63
CBX4-204ENST00000495122 REG3AQ06141 175 aa11.1□□□□□ -0.63
CBX4-204ENST00000495122 MEIG1Q5JSS6 88 aa11.1□□□□□ -0.63
CBX4-204ENST00000495122 ADAMTSL4-AS1Q5T5F5 129 aa11.1□□□□□ -0.63
CBX4-204ENST00000495122 Q6ZTC4 211 aa11.1□□□□□ -0.63
CBX4-204ENST00000495122 PRR34Q9NV39 138 aa11.1□□□□□ -0.63
CBX4-204ENST00000495122 KLK5Q9Y337 293 aaPredicted RBP11.1□□□□□ -0.63
CBX4-204ENST00000495122 IBA57-AS1B1ANH7 110 aa11.09□□□□□ -0.63
CBX4-204ENST00000495122 LINC00269Q8N2A0 174 aa11.09□□□□□ -0.63
CBX4-204ENST00000495122 NAA38Q9BRA0 125 aaKnown RBP11.09□□□□□ -0.63
CBX4-204ENST00000495122 TRBV20-1A0A075B6N2 111 aa11.08□□□□□ -0.64
CBX4-204ENST00000495122 TRAV8-4A0A0B4J246 113 aa11.08□□□□□ -0.64
CBX4-204ENST00000495122 COX7A2LO14548 114 aa11.08□□□□□ -0.64
CBX4-204ENST00000495122 IGHV3-33P01772 117 aa11.08□□□□□ -0.64
CBX4-204ENST00000495122 ERG28Q9UKR5 140 aa11.08□□□□□ -0.64
CBX4-204ENST00000495122 DNAH10Q8IVF4 4471 aa11.08□□□□□ -0.64
CBX4-204ENST00000495122 DEFB131BA0A096LNP1 70 aa11.07□□□□□ -0.64
CBX4-204ENST00000495122 XCL1P47992 114 aa11.07□□□□□ -0.64
CBX4-204ENST00000495122 C15orf53Q8NAA6 179 aa11.07□□□□□ -0.64
CBX4-204ENST00000495122 LINC00308Q8TCZ7 52 aa11.07□□□□□ -0.64
CBX4-204ENST00000495122 CHCHD10Q8WYQ3 142 aaPredicted RBP11.07□□□□□ -0.64
CBX4-204ENST00000495122 TRAV10A0A0B4J240 114 aa11.06□□□□□ -0.64
CBX4-204ENST00000495122 NANOS2P60321 138 aaKnown RBP11.06□□□□□ -0.64
CBX4-204ENST00000495122 C5orf38Q86SI9 138 aa11.06□□□□□ -0.64
CBX4-204ENST00000495122 TOMM7Q9P0U1 55 aa11.05□□□□□ -0.64
CBX4-204ENST00000495122 F8W1H4 67 aa11.04□□□□□ -0.64
CBX4-204ENST00000495122 C6orf226Q5I0X4 101 aa11.04□□□□□ -0.64
CBX4-204ENST00000495122 TRBV30A0A0K0K1B3 111 aa11.03□□□□□ -0.64
CBX4-204ENST00000495122 CRPP02741 224 aa11.03□□□□□ -0.64
CBX4-204ENST00000495122 MALP21145 153 aa11.02□□□□□ -0.65
CBX4-204ENST00000495122 COX17Q14061 63 aa11.02□□□□□ -0.65
CBX4-204ENST00000495122 CFAP161Q6P656 301 aa11.02□□□□□ -0.65
CBX4-204ENST00000495122 LOC107984156A0A0G2JMH3 177 aa11.01□□□□□ -0.65
CBX4-204ENST00000495122 EIF4EBP3O60516 100 aaPredicted RBP11.01□□□□□ -0.65
CBX4-204ENST00000495122 FOXI1Q12951 378 aa11.01□□□□□ -0.65
CBX4-204ENST00000495122 CLPSL2Q6UWE3 100 aa11.01□□□□□ -0.65
CBX4-204ENST00000495122 ARL17AQ8IVW1 177 aa11.01□□□□□ -0.65
CBX4-204ENST00000495122 COX6CP09669 75 aa11□□□□□ -0.65
CBX4-204ENST00000495122 LINC01556Q5JQF7 62 aa11□□□□□ -0.65
CBX4-204ENST00000495122 PSMB2P49721 201 aa10.99□□□□□ -0.65
CBX4-204ENST00000495122 CKS1BP61024 79 aa10.99□□□□□ -0.65
CBX4-204ENST00000495122 Q1RN00 199 aa10.99□□□□□ -0.65
CBX4-204ENST00000495122 KLK12Q9UKR0 248 aa10.99□□□□□ -0.65
CBX4-204ENST00000495122 SCGB1C2P0DMR2 95 aa10.98□□□□□ -0.65
CBX4-204ENST00000495122 KIAA0087Q14695 138 aa10.98□□□□□ -0.65
CBX4-204ENST00000495122 HECTD4Q9Y4D8 3996 aa10.98□□□□□ -0.65
CBX4-204ENST00000495122 TRAV13-2A0A0B4J235 113 aa10.97□□□□□ -0.65
CBX4-204ENST00000495122 GAGE12HA6NDE8 117 aa10.97□□□□□ -0.65
CBX4-204ENST00000495122 LINC00158P58513 81 aa10.97□□□□□ -0.65
CBX4-204ENST00000495122 ESRGQ1W209 222 aa10.97□□□□□ -0.65
CBX4-204ENST00000495122 ENHOQ6UWT2 76 aa10.97□□□□□ -0.65
CBX4-204ENST00000495122 MIR7-3HGQ8N6C7 128 aa10.97□□□□□ -0.65
CBX4-204ENST00000495122 DAND5Q8N907 189 aa10.97□□□□□ -0.65
CBX4-204ENST00000495122 H3BMG7 143 aa10.96□□□□□ -0.65
CBX4-204ENST00000495122 SOSTDC1Q6X4U4 206 aa10.96□□□□□ -0.65
CBX4-204ENST00000495122 Q8N3U1 123 aa10.96□□□□□ -0.65
CBX4-204ENST00000495122 KRTAP17-1Q9BYP8 105 aa10.96□□□□□ -0.65
CBX4-204ENST00000495122 APLNQ9ULZ1 77 aa10.96□□□□□ -0.65
CBX4-204ENST00000495122 F8WDY8 70 aa10.95□□□□□ -0.66
CBX4-204ENST00000495122 K7ERU9 68 aa10.95□□□□□ -0.66
CBX4-204ENST00000495122 M0QXV9 152 aa10.95□□□□□ -0.66
CBX4-204ENST00000495122 RPL13AP40429 203 aaKnown RBP10.95□□□□□ -0.66
CBX4-204ENST00000495122 NPC2P61916 151 aa10.95□□□□□ -0.66
CBX4-204ENST00000495122 WFDC10BQ8IUB3 73 aa10.95□□□□□ -0.66
CBX4-204ENST00000495122 IGLV10-54A0A075B6I4 117 aa10.94□□□□□ -0.66
CBX4-204ENST00000495122 DNAH10OSP0CZ25 163 aa10.94□□□□□ -0.66
CBX4-204ENST00000495122 ATXN8Q156A1 80 aa10.94□□□□□ -0.66
CBX4-204ENST00000495122 UBE2WQ96B02 151 aa10.94□□□□□ -0.66
CBX4-204ENST00000495122 PRO0461Q9UI25 63 aa10.94□□□□□ -0.66
CBX4-204ENST00000495122 GVQW2A0A096LPI5 108 aaPredicted RBP10.93□□□□□ -0.66
CBX4-204ENST00000495122 A0A0U1RRA0 63 aa10.93□□□□□ -0.66
CBX4-204ENST00000495122 TCL1BO95988 128 aa10.93□□□□□ -0.66
CBX4-204ENST00000495122 SPAG11BQ08648 103 aa10.93□□□□□ -0.66
CBX4-204ENST00000495122 SND1-IT1Q9HBX3 110 aa10.93□□□□□ -0.66
CBX4-204ENST00000495122 TRIAP1O43715 76 aa10.92□□□□□ -0.66
CBX4-204ENST00000495122 OCIAD2Q56VL3 154 aa10.92□□□□□ -0.66
CBX4-204ENST00000495122 H7C2G1 150 aa10.91□□□□□ -0.66
CBX4-204ENST00000495122 CCL18P55774 89 aa10.91□□□□□ -0.66
CBX4-204ENST00000495122 LINC01600Q96MT4 127 aa10.91□□□□□ -0.66
CBX4-204ENST00000495122 NDUFC2O95298 119 aa10.9□□□□□ -0.66
CBX4-204ENST00000495122 DNAH17Q9UFH2 4485 aa10.89□□□□□ -0.67
CBX4-204ENST00000495122 PFN2P35080 140 aa10.89□□□□□ -0.67
CBX4-204ENST00000495122 UPK3BQ9BT76 320 aa10.89□□□□□ -0.67
CBX4-204ENST00000495122 C1orf43Q9BWL3 253 aa10.89□□□□□ -0.67
CBX4-204ENST00000495122 HERC2O95714 4834 aa10.88□□□□□ -0.67
CBX4-204ENST00000495122 FAT2Q9NYQ8 4349 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms