RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 Q8IZM0 81 aa5.71□□□□□ -1.5
UBR4-216ENST00000494503 A0A087X002 238 aa5.7□□□□□ -1.5
UBR4-216ENST00000494503 F8VRH5 84 aa5.7□□□□□ -1.5
UBR4-216ENST00000494503 BCE1O60756 84 aa5.7□□□□□ -1.5
UBR4-216ENST00000494503 UBE2AP49459 152 aa5.7□□□□□ -1.5
UBR4-216ENST00000494503 HERVK_113P63121 156 aa5.7□□□□□ -1.5
UBR4-216ENST00000494503 ORMDL2Q53FV1 153 aa5.7□□□□□ -1.5
UBR4-216ENST00000494503 LINC01561Q8N1V8 128 aa5.7□□□□□ -1.5
UBR4-216ENST00000494503 Q8N8P6 123 aa5.7□□□□□ -1.5
UBR4-216ENST00000494503 RETNLBQ9BQ08 111 aa5.7□□□□□ -1.5
UBR4-216ENST00000494503 ANAPC11Q9NYG5 84 aa5.7□□□□□ -1.5
UBR4-216ENST00000494503 RAB5BP61020 215 aa5.69□□□□□ -1.5
UBR4-216ENST00000494503 SEC11AP67812 179 aa5.69□□□□□ -1.5
UBR4-216ENST00000494503 PAPPA-AS1Q5QFB9 102 aa5.69□□□□□ -1.5
UBR4-216ENST00000494503 LINC00173Q6ZV60 143 aa5.69□□□□□ -1.5
UBR4-216ENST00000494503 NKAPP1Q8N9T2 125 aa5.69□□□□□ -1.5
UBR4-216ENST00000494503 CDKN2A-AS1Q9UH64 79 aa5.69□□□□□ -1.5
UBR4-216ENST00000494503 LAMTOR2Q9Y2Q5 125 aa5.69□□□□□ -1.5
UBR4-216ENST00000494503 ANAPC16Q96DE5 110 aa5.68□□□□□ -1.5
UBR4-216ENST00000494503 AMELXQ99217 191 aa5.68□□□□□ -1.5
UBR4-216ENST00000494503 CXCL5P42830 114 aa5.67□□□□□ -1.5
UBR4-216ENST00000494503 LINC00167Q96N53 147 aa5.67□□□□□ -1.5
UBR4-216ENST00000494503 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
UBR4-216ENST00000494503 CDIP1Q9H305 208 aa5.67□□□□□ -1.5
UBR4-216ENST00000494503 TP73-AS1Q9UF72 201 aa5.67□□□□□ -1.5
UBR4-216ENST00000494503 IGKV2-28A0A075B6P5 120 aa5.66□□□□□ -1.5
UBR4-216ENST00000494503 IGKV2D-28P01615 120 aa5.66□□□□□ -1.5
UBR4-216ENST00000494503 COX7B2Q8TF08 81 aa5.66□□□□□ -1.5
UBR4-216ENST00000494503 NXT2Q9NPJ8 142 aaKnown RBP5.66□□□□□ -1.5
UBR4-216ENST00000494503 IGKV2D-26A0A0A0MRZ7 120 aa5.65□□□□□ -1.5
UBR4-216ENST00000494503 IGIPA6NJ69 53 aa5.65□□□□□ -1.5
UBR4-216ENST00000494503 PRSS47A8MTI9 375 aa5.65□□□□□ -1.5
UBR4-216ENST00000494503 MT-ND4LP03901 98 aa5.65□□□□□ -1.5
UBR4-216ENST00000494503 G0S2P27469 103 aa5.65□□□□□ -1.5
UBR4-216ENST00000494503 LINC00304Q8N9R0 145 aa5.65□□□□□ -1.5
UBR4-216ENST00000494503 SCGB3A1Q96QR1 104 aa5.65□□□□□ -1.5
UBR4-216ENST00000494503 SMIM1B2RUZ4 78 aa5.64□□□□□ -1.51
UBR4-216ENST00000494503 K7EMI3 77 aa5.64□□□□□ -1.51
UBR4-216ENST00000494503 SCO1O75880 301 aa5.64□□□□□ -1.51
UBR4-216ENST00000494503 NPSP0C0P6 89 aa5.64□□□□□ -1.51
UBR4-216ENST00000494503 SPINK8P0C7L1 97 aa5.64□□□□□ -1.51
UBR4-216ENST00000494503 PNRC1Q12796 327 aaPredicted RBP5.64□□□□□ -1.51
UBR4-216ENST00000494503 ATP5LO75964 103 aa5.63□□□□□ -1.51
UBR4-216ENST00000494503 PFN2P35080 140 aa5.63□□□□□ -1.51
UBR4-216ENST00000494503 PRLHP81277 87 aa5.63□□□□□ -1.51
UBR4-216ENST00000494503 KIAA1644Q3SXP7 199 aa5.63□□□□□ -1.51
UBR4-216ENST00000494503 FAM19A1Q7Z5A9 133 aa5.63□□□□□ -1.51
UBR4-216ENST00000494503 TIMM17AQ99595 171 aa5.63□□□□□ -1.51
UBR4-216ENST00000494503 IGLV7-46A0A075B6I9 117 aa5.62□□□□□ -1.51
UBR4-216ENST00000494503 KRTAP13-2Q52LG2 175 aa5.62□□□□□ -1.51
UBR4-216ENST00000494503 PDZD11Q5EBL8 140 aa5.62□□□□□ -1.51
UBR4-216ENST00000494503 FAM19A3Q7Z5A8 133 aa5.62□□□□□ -1.51
UBR4-216ENST00000494503 TOMM6Q96B49 74 aa5.62□□□□□ -1.51
UBR4-216ENST00000494503 TINCRA0A1B0GVN0 87 aa5.61□□□□□ -1.51
UBR4-216ENST00000494503 ADCYAP1P18509 176 aa5.61□□□□□ -1.51
UBR4-216ENST00000494503 NDUFA6P56556 154 aa5.61□□□□□ -1.51
UBR4-216ENST00000494503 ERASQ7Z444 233 aa5.61□□□□□ -1.51
UBR4-216ENST00000494503 A0A1B0GVG6 124 aa5.6□□□□□ -1.51
UBR4-216ENST00000494503 H3BRM9 83 aa5.6□□□□□ -1.51
UBR4-216ENST00000494503 FAM229BQ4G0N7 80 aa5.6□□□□□ -1.51
UBR4-216ENST00000494503 TMEM238C9JI98 176 aa5.59□□□□□ -1.51
UBR4-216ENST00000494503 RAB14P61106 215 aa5.59□□□□□ -1.51
UBR4-216ENST00000494503 C21orf62-AS1Q17RA5 79 aa5.59□□□□□ -1.51
UBR4-216ENST00000494503 HIGD2AQ9BW72 106 aa5.59□□□□□ -1.51
UBR4-216ENST00000494503 SMCO4Q9NRQ5 59 aa5.59□□□□□ -1.51
UBR4-216ENST00000494503 IGLV5-37A0A075B6J1 123 aa5.58□□□□□ -1.52
UBR4-216ENST00000494503 TMEM238LA0A1B0GVL6 79 aa5.58□□□□□ -1.52
UBR4-216ENST00000494503 PMVKQ15126 192 aa5.58□□□□□ -1.52
UBR4-216ENST00000494503 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
UBR4-216ENST00000494503 FA2HQ7L5A8 372 aa5.58□□□□□ -1.52
UBR4-216ENST00000494503 KRTAP13-1Q8IUC0 172 aa5.58□□□□□ -1.52
UBR4-216ENST00000494503 CBLN2Q8IUK8 224 aa5.58□□□□□ -1.52
UBR4-216ENST00000494503 ZNF625Q96I27 306 aaPredicted RBP5.58□□□□□ -1.52
UBR4-216ENST00000494503 TMEM126AQ9H061 195 aa5.58□□□□□ -1.52
UBR4-216ENST00000494503 CST9LQ9H4G1 147 aa5.58□□□□□ -1.52
UBR4-216ENST00000494503 IGLV5-45A0A087WSX0 123 aa5.57□□□□□ -1.52
UBR4-216ENST00000494503 RPL24P83731 157 aaKnown RBP5.57□□□□□ -1.52
UBR4-216ENST00000494503 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
UBR4-216ENST00000494503 MRPL18Q9H0U6 180 aaKnown RBP5.57□□□□□ -1.52
UBR4-216ENST00000494503 PPDPFQ9H3Y8 114 aa5.57□□□□□ -1.52
UBR4-216ENST00000494503 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
UBR4-216ENST00000494503 C3orf22Q8N5N4 141 aa5.56□□□□□ -1.52
UBR4-216ENST00000494503 LINC00337Q8N6G1 96 aa5.56□□□□□ -1.52
UBR4-216ENST00000494503 KRTAP3-3Q9BYR6 98 aa5.56□□□□□ -1.52
UBR4-216ENST00000494503 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
UBR4-216ENST00000494503 SND1-IT1Q9HBX3 110 aa5.56□□□□□ -1.52
UBR4-216ENST00000494503 ERG28Q9UKR5 140 aa5.56□□□□□ -1.52
UBR4-216ENST00000494503 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
UBR4-216ENST00000494503 LINC01549A6NIU2 74 aa5.55□□□□□ -1.52
UBR4-216ENST00000494503 VPREB1P12018 145 aa5.55□□□□□ -1.52
UBR4-216ENST00000494503 S100PP25815 95 aa5.55□□□□□ -1.52
UBR4-216ENST00000494503 A0A0U1RRA0 63 aa5.54□□□□□ -1.52
UBR4-216ENST00000494503 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
UBR4-216ENST00000494503 M0R378 163 aa5.53□□□□□ -1.52
UBR4-216ENST00000494503 LINC00158P58513 81 aa5.53□□□□□ -1.52
UBR4-216ENST00000494503 FABP9Q0Z7S8 132 aa5.53□□□□□ -1.52
UBR4-216ENST00000494503 TMEM170BQ5T4T1 132 aa5.53□□□□□ -1.52
UBR4-216ENST00000494503 PLEKHB2Q96CS7 222 aa5.53□□□□□ -1.52
UBR4-216ENST00000494503 ATP6V1G1O75348 118 aa5.52□□□□□ -1.53
UBR4-216ENST00000494503 IGLC3P0DOY3 106 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms