RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 NKTRP30414 1462 aaKnown RBP3.13□□□□□ -1.91
SNX13-210ENST00000494402 ASXL1Q8IXJ9 1541 aa3.13□□□□□ -1.91
SNX13-210ENST00000494402 ZNF236Q9UL36 1845 aa3.12□□□□□ -1.91
SNX13-210ENST00000494402 H0Y9P7 68 aa3.12□□□□□ -1.91
SNX13-210ENST00000494402 SFTA3P0C7M3 94 aa3.12□□□□□ -1.91
SNX13-210ENST00000494402 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.12□□□□□ -1.91
SNX13-210ENST00000494402 LINC00472Q9H8W2 130 aa3.12□□□□□ -1.91
SNX13-210ENST00000494402 UNC80Q8N2C7 3258 aa3.12□□□□□ -1.91
SNX13-210ENST00000494402 CCDC180Q9P1Z9 1646 aa3.11□□□□□ -1.91
SNX13-210ENST00000494402 ATP7BP35670 1465 aa3.11□□□□□ -1.91
SNX13-210ENST00000494402 A0A1B0GUT8 65 aa3.11□□□□□ -1.91
SNX13-210ENST00000494402 VCANP13611 3396 aa3.11□□□□□ -1.91
SNX13-210ENST00000494402 CRYBG1Q9Y4K1 1723 aa3.1□□□□□ -1.91
SNX13-210ENST00000494402 NCR3O14931 201 aa3.1□□□□□ -1.91
SNX13-210ENST00000494402 GNGT1P63211 74 aa3.1□□□□□ -1.91
SNX13-210ENST00000494402 SPATA8Q6RVD6 105 aa3.1□□□□□ -1.91
SNX13-210ENST00000494402 LINC00575Q6W349 94 aa3.1□□□□□ -1.91
SNX13-210ENST00000494402 E9PCH4 1651 aa3.1□□□□□ -1.91
SNX13-210ENST00000494402 URB2Q14146 1524 aaKnown RBP3.09□□□□□ -1.91
SNX13-210ENST00000494402 TIAM1Q13009 1591 aa3.09□□□□□ -1.91
SNX13-210ENST00000494402 NWD1Q149M9 1564 aa3.09□□□□□ -1.91
SNX13-210ENST00000494402 SHPRHQ149N8 1683 aa3.09□□□□□ -1.91
SNX13-210ENST00000494402 TRBV7-4A0A0J9YYF1 115 aa3.09□□□□□ -1.91
SNX13-210ENST00000494402 ITSN1Q15811 1721 aa3.09□□□□□ -1.91
SNX13-210ENST00000494402 SDK1Q7Z5N4 2213 aa3.09□□□□□ -1.91
SNX13-210ENST00000494402 LAMA2P24043 3122 aaKnown RBP3.09□□□□□ -1.92
SNX13-210ENST00000494402 ZFHX4Q86UP3 3567 aa3.09□□□□□ -1.92
SNX13-210ENST00000494402 EPG5Q9HCE0 2579 aa3.08□□□□□ -1.92
SNX13-210ENST00000494402 EYSQ5T1H1 3165 aa3.08□□□□□ -1.92
SNX13-210ENST00000494402 A0A096LNT2 108 aa3.08□□□□□ -1.92
SNX13-210ENST00000494402 SPINK13Q1W4C9 94 aa3.08□□□□□ -1.92
SNX13-210ENST00000494402 PCOTHQ58A44 107 aa3.08□□□□□ -1.92
SNX13-210ENST00000494402 SMIM11BQ8TCY0 68 aa3.08□□□□□ -1.92
SNX13-210ENST00000494402 PLAC4Q8WY50 150 aa3.08□□□□□ -1.92
SNX13-210ENST00000494402 HILPDAQ9Y5L2 63 aa3.08□□□□□ -1.92
SNX13-210ENST00000494402 CPS1P31327 1500 aa3.08□□□□□ -1.92
SNX13-210ENST00000494402 LRP6O75581 1613 aa3.08□□□□□ -1.92
SNX13-210ENST00000494402 PREX2Q70Z35 1606 aa3.08□□□□□ -1.92
SNX13-210ENST00000494402 DOPEY1Q5JWR5 2465 aa3.08□□□□□ -1.92
SNX13-210ENST00000494402 ANKRD17O75179 2603 aaKnown RBP3.07□□□□□ -1.92
SNX13-210ENST00000494402 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
SNX13-210ENST00000494402 ABCA10Q8WWZ4 1543 aa3.07□□□□□ -1.92
SNX13-210ENST00000494402 SPTBN5Q9NRC6 3674 aaKnown RBP3.07□□□□□ -1.92
SNX13-210ENST00000494402 H3BVH4 76 aa3.06□□□□□ -1.92
SNX13-210ENST00000494402 COL4A1P02462 1669 aa3.06□□□□□ -1.92
SNX13-210ENST00000494402 KRTAP13-3Q3SY46 172 aa3.06□□□□□ -1.92
SNX13-210ENST00000494402 SMIM5Q71RC9 77 aa3.06□□□□□ -1.92
SNX13-210ENST00000494402 RP1L1Q8IWN7 2480 aaPredicted RBP3.05□□□□□ -1.92
SNX13-210ENST00000494402 PIK3C2BO00750 1634 aa3.05□□□□□ -1.92
SNX13-210ENST00000494402 GLI2P10070 1586 aa3.05□□□□□ -1.92
SNX13-210ENST00000494402 CEP170BQ9Y4F5 1589 aaPredicted RBP3.05□□□□□ -1.92
SNX13-210ENST00000494402 C1orf167Q5SNV9 1468 aa3.05□□□□□ -1.92
SNX13-210ENST00000494402 ABCA12Q86UK0 2595 aa3.05□□□□□ -1.92
SNX13-210ENST00000494402 SPINK7P58062 85 aa3.05□□□□□ -1.92
SNX13-210ENST00000494402 KRTAP12-2P59991 146 aa3.05□□□□□ -1.92
SNX13-210ENST00000494402 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
SNX13-210ENST00000494402 C10orf113Q5VZT2 155 aa3.05□□□□□ -1.92
SNX13-210ENST00000494402 Q6ZRX8 168 aa3.05□□□□□ -1.92
SNX13-210ENST00000494402 MED13LQ71F56 2210 aa3.05□□□□□ -1.92
SNX13-210ENST00000494402 NCOA6Q14686 2063 aaPredicted RBP3.05□□□□□ -1.92
SNX13-210ENST00000494402 ASH1LQ9NR48 2969 aaKnown RBP3.05□□□□□ -1.92
SNX13-210ENST00000494402 ZNF292O60281 2723 aa3.05□□□□□ -1.92
SNX13-210ENST00000494402 LRRC37A2A6NM11 1700 aa3.05□□□□□ -1.92
SNX13-210ENST00000494402 TTC28Q96AY4 2481 aa3.04□□□□□ -1.92
SNX13-210ENST00000494402 CD163L1Q9NR16 1453 aa3.04□□□□□ -1.92
SNX13-210ENST00000494402 ITPR3Q14573 2671 aa3.04□□□□□ -1.92
SNX13-210ENST00000494402 CFAP47Q6ZTR5 3102 aa3.04□□□□□ -1.92
SNX13-210ENST00000494402 C5P01031 1676 aa3.04□□□□□ -1.92
SNX13-210ENST00000494402 DNAJC13O75165 2243 aa3.03□□□□□ -1.92
SNX13-210ENST00000494402 GVQW2A0A096LPI5 108 aaPredicted RBP3.03□□□□□ -1.92
SNX13-210ENST00000494402 NDUFB1O75438 58 aa3.03□□□□□ -1.92
SNX13-210ENST00000494402 C3orf79P0CE67 100 aa3.03□□□□□ -1.92
SNX13-210ENST00000494402 GNG13Q9P2W3 67 aa3.03□□□□□ -1.92
SNX13-210ENST00000494402 ANKRD36A6QL64 1941 aa3.03□□□□□ -1.92
SNX13-210ENST00000494402 TRIOBPQ9H2D6 2365 aa3.02□□□□□ -1.93
SNX13-210ENST00000494402 GCN1Q92616 2671 aaKnown RBP3.02□□□□□ -1.93
SNX13-210ENST00000494402 ABCA9Q8IUA7 1624 aa3.02□□□□□ -1.93
SNX13-210ENST00000494402 MYO18BQ8IUG5 2567 aa3.02□□□□□ -1.93
SNX13-210ENST00000494402 ZDBF2Q9HCK1 2354 aa3.02□□□□□ -1.93
SNX13-210ENST00000494402 RALGAPBQ86X10 1494 aa3.01□□□□□ -1.93
SNX13-210ENST00000494402 MAP2P11137 1827 aaKnown RBP3□□□□□ -1.93
SNX13-210ENST00000494402 CDC42BPGQ6DT37 1551 aa3□□□□□ -1.93
SNX13-210ENST00000494402 TRBV6-1A0A0K0K1D8 114 aa3□□□□□ -1.93
SNX13-210ENST00000494402 S100A3P33764 101 aa3□□□□□ -1.93
SNX13-210ENST00000494402 ATXN8Q156A1 80 aa3□□□□□ -1.93
SNX13-210ENST00000494402 COL4A4P53420 1690 aaPredicted RBP3□□□□□ -1.93
SNX13-210ENST00000494402 MUC6Q6W4X9 2439 aa3□□□□□ -1.93
SNX13-210ENST00000494402 FBN3Q75N90 2809 aa3□□□□□ -1.93
SNX13-210ENST00000494402 PKD1L3Q7Z443 1732 aa2.99□□□□□ -1.93
SNX13-210ENST00000494402 KIAA0586Q9BVV6 1533 aa2.99□□□□□ -1.93
SNX13-210ENST00000494402 FANCD2Q9BXW9 1451 aa2.99□□□□□ -1.93
SNX13-210ENST00000494402 G3V318 75 aa2.99□□□□□ -1.93
SNX13-210ENST00000494402 PIN1P1O15428 100 aa2.99□□□□□ -1.93
SNX13-210ENST00000494402 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
SNX13-210ENST00000494402 PLCH1Q4KWH8 1693 aa2.98□□□□□ -1.93
SNX13-210ENST00000494402 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
SNX13-210ENST00000494402 PLXNC1O60486 1568 aa2.98□□□□□ -1.93
SNX13-210ENST00000494402 SAMD9Q5K651 1589 aa2.98□□□□□ -1.93
SNX13-210ENST00000494402 HECTD1Q9ULT8 2610 aa2.98□□□□□ -1.93
SNX13-210ENST00000494402 MUC3AQ02505 3323 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms