RNA–Protein interactions for RNA: ENST00000493699.1

HLA-E-203, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 907 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-203ENST00000493699 C6orf226Q5I0X4 101 aa13.43□□□□□ -0.26
HLA-E-203ENST00000493699 C10orf91Q5T1B1 145 aa13.43□□□□□ -0.26
HLA-E-203ENST00000493699 TOMM7Q9P0U1 55 aa13.43□□□□□ -0.26
HLA-E-203ENST00000493699 IGLV7-43P04211 117 aa13.42□□□□□ -0.26
HLA-E-203ENST00000493699 PRSS2P07478 247 aa13.42□□□□□ -0.26
HLA-E-203ENST00000493699 CKS1BP61024 79 aa13.41□□□□□ -0.26
HLA-E-203ENST00000493699 COMMD7Q86VX2 200 aa13.41□□□□□ -0.26
HLA-E-203ENST00000493699 SCGB3A1Q96QR1 104 aa13.41□□□□□ -0.26
HLA-E-203ENST00000493699 LRP2P98164 4655 aa13.4□□□□□ -0.26
HLA-E-203ENST00000493699 GEMIN7Q9H840 131 aaKnown RBP13.4□□□□□ -0.26
HLA-E-203ENST00000493699 M0QXV9 152 aa13.39□□□□□ -0.27
HLA-E-203ENST00000493699 COX19Q49B96 90 aa13.39□□□□□ -0.27
HLA-E-203ENST00000493699 LINC01549A6NIU2 74 aa13.37□□□□□ -0.27
HLA-E-203ENST00000493699 CARHSP1Q9Y2V2 147 aaKnown RBP13.37□□□□□ -0.27
HLA-E-203ENST00000493699 TINCRA0A1B0GVN0 87 aa13.36□□□□□ -0.27
HLA-E-203ENST00000493699 DIRC1Q969H9 104 aa13.36□□□□□ -0.27
HLA-E-203ENST00000493699 MRPL18Q9H0U6 180 aaKnown RBP13.36□□□□□ -0.27
HLA-E-203ENST00000493699 IGLV5-45A0A087WSX0 123 aa13.35□□□□□ -0.27
HLA-E-203ENST00000493699 SMIM1B2RUZ4 78 aa13.35□□□□□ -0.27
HLA-E-203ENST00000493699 F8VRH5 84 aa13.35□□□□□ -0.27
HLA-E-203ENST00000493699 RHEBQ15382 184 aa13.35□□□□□ -0.27
HLA-E-203ENST00000493699 LINC00469Q8N7U9 141 aa13.35□□□□□ -0.27
HLA-E-203ENST00000493699 CST9LQ9H4G1 147 aa13.35□□□□□ -0.27
HLA-E-203ENST00000493699 FABP9Q0Z7S8 132 aa13.34□□□□□ -0.27
HLA-E-203ENST00000493699 RPS10P5Q9NQ39 176 aa13.34□□□□□ -0.27
HLA-E-203ENST00000493699 H0Y9J4 135 aa13.33□□□□□ -0.28
HLA-E-203ENST00000493699 UBE2BP63146 152 aa13.33□□□□□ -0.28
HLA-E-203ENST00000493699 PDZD11Q5EBL8 140 aa13.33□□□□□ -0.28
HLA-E-203ENST00000493699 CXCL5P42830 114 aa13.32□□□□□ -0.28
HLA-E-203ENST00000493699 XAGE1AQ9HD64 81 aa13.32□□□□□ -0.28
HLA-E-203ENST00000493699 PMVKQ15126 192 aa13.31□□□□□ -0.28
HLA-E-203ENST00000493699 FA2HQ7L5A8 372 aa13.31□□□□□ -0.28
HLA-E-203ENST00000493699 C22orf24Q9Y442 160 aa13.31□□□□□ -0.28
HLA-E-203ENST00000493699 COX7B2Q8TF08 81 aa13.29□□□□□ -0.28
HLA-E-203ENST00000493699 SMCO4Q9NRQ5 59 aa13.29□□□□□ -0.28
HLA-E-203ENST00000493699 A0A096LNJ9 63 aa13.28□□□□□ -0.28
HLA-E-203ENST00000493699 KRTAP1-4P0C5Y4 121 aa13.28□□□□□ -0.28
HLA-E-203ENST00000493699 PRR26Q8N8Z3 221 aa13.28□□□□□ -0.28
HLA-E-203ENST00000493699 URB1-AS1Q96HZ7 61 aa13.28□□□□□ -0.28
HLA-E-203ENST00000493699 SPINK8P0C7L1 97 aa13.26□□□□□ -0.29
HLA-E-203ENST00000493699 LBHQ53QV2 105 aaPredicted RBP13.25□□□□□ -0.29
HLA-E-203ENST00000493699 C18orf32Q8TCD1 76 aa13.25□□□□□ -0.29
HLA-E-203ENST00000493699 TP73-AS1Q9UF72 201 aa13.25□□□□□ -0.29
HLA-E-203ENST00000493699 TRAPPC1Q9Y5R8 145 aa13.24□□□□□ -0.29
HLA-E-203ENST00000493699 LINC00614P0C842 121 aa13.23□□□□□ -0.29
HLA-E-203ENST00000493699 NUPR1O60356 82 aa13.22□□□□□ -0.29
HLA-E-203ENST00000493699 ZNF861PO60384 105 aa13.22□□□□□ -0.29
HLA-E-203ENST00000493699 IGLC3P0DOY3 106 aa13.22□□□□□ -0.29
HLA-E-203ENST00000493699 MRPL55Q7Z7F7 128 aaKnown RBP13.22□□□□□ -0.29
HLA-E-203ENST00000493699 IGLV1-50A0A075B6I6 118 aa13.21□□□□□ -0.29
HLA-E-203ENST00000493699 IGLV5-39A0A0G2JS06 123 aa13.2□□□□□ -0.3
HLA-E-203ENST00000493699 H3BRM9 83 aa13.2□□□□□ -0.3
HLA-E-203ENST00000493699 APOC3P02656 99 aa13.2□□□□□ -0.3
HLA-E-203ENST00000493699 RAB5BP61020 215 aa13.19□□□□□ -0.3
HLA-E-203ENST00000493699 HBDP02042 147 aa13.18□□□□□ -0.3
HLA-E-203ENST00000493699 LINC00167Q96N53 147 aa13.18□□□□□ -0.3
HLA-E-203ENST00000493699 ZNF22P17026 224 aaPredicted RBP13.17□□□□□ -0.3
HLA-E-203ENST00000493699 NDUFA6P56556 154 aa13.17□□□□□ -0.3
HLA-E-203ENST00000493699 PMCHL1Q16048 86 aa13.17□□□□□ -0.3
HLA-E-203ENST00000493699 RNF213Q63HN8 5207 aa13.16□□□□□ -0.3
HLA-E-203ENST00000493699 IGLV5-37A0A075B6J1 123 aa13.16□□□□□ -0.3
HLA-E-203ENST00000493699 SNAPINO95295 136 aa13.16□□□□□ -0.3
HLA-E-203ENST00000493699 SVBPQ8N300 66 aa13.16□□□□□ -0.3
HLA-E-203ENST00000493699 ATP5LO75964 103 aa13.15□□□□□ -0.3
HLA-E-203ENST00000493699 BCE1O60756 84 aa13.14□□□□□ -0.31
HLA-E-203ENST00000493699 LPAP08519 4548 aa13.14□□□□□ -0.31
HLA-E-203ENST00000493699 RPL37AP8A6NKH3 93 aa13.13□□□□□ -0.31
HLA-E-203ENST00000493699 YPEL4Q96NS1 127 aa13.13□□□□□ -0.31
HLA-E-203ENST00000493699 RPL13AP40429 203 aaKnown RBP13.12□□□□□ -0.31
HLA-E-203ENST00000493699 NDUFA5Q16718 116 aa13.12□□□□□ -0.31
HLA-E-203ENST00000493699 BAGE3Q86Y29 109 aa13.11□□□□□ -0.31
HLA-E-203ENST00000493699 GAGE10A6NGK3 116 aa13.1□□□□□ -0.31
HLA-E-203ENST00000493699 C11orf86A6NJI1 115 aa13.1□□□□□ -0.31
HLA-E-203ENST00000493699 PFN2P35080 140 aa13.1□□□□□ -0.31
HLA-E-203ENST00000493699 RPL28P46779 137 aaKnown RBP13.1□□□□□ -0.31
HLA-E-203ENST00000493699 COX17Q14061 63 aa13.08□□□□□ -0.32
HLA-E-203ENST00000493699 NKAPP1Q8N9T2 125 aa13.08□□□□□ -0.32
HLA-E-203ENST00000493699 ERG28Q9UKR5 140 aa13.08□□□□□ -0.32
HLA-E-203ENST00000493699 KRTAP13-1Q8IUC0 172 aa13.07□□□□□ -0.32
HLA-E-203ENST00000493699 SCO1O75880 301 aa13.06□□□□□ -0.32
HLA-E-203ENST00000493699 TMEM170BQ5T4T1 132 aa13.06□□□□□ -0.32
HLA-E-203ENST00000493699 SND1-IT1Q9HBX3 110 aa13.06□□□□□ -0.32
HLA-E-203ENST00000493699 VPREB1P12018 145 aa13.05□□□□□ -0.32
HLA-E-203ENST00000493699 CHCHD1Q96BP2 118 aaKnown RBP13.05□□□□□ -0.32
HLA-E-203ENST00000493699 ZNF625Q96I27 306 aaPredicted RBP13.05□□□□□ -0.32
HLA-E-203ENST00000493699 CHTOPQ9Y3Y2 248 aaKnown RBP13.04□□□□□ -0.32
HLA-E-203ENST00000493699 A0A087X002 238 aa13.03□□□□□ -0.32
HLA-E-203ENST00000493699 SFTA2Q6UW10 78 aa13.03□□□□□ -0.32
HLA-E-203ENST00000493699 IGKV2-28A0A075B6P5 120 aa13.02□□□□□ -0.33
HLA-E-203ENST00000493699 TRAV12-1A0A0B4J245 112 aa13.02□□□□□ -0.33
HLA-E-203ENST00000493699 IGKV2D-28P01615 120 aa13.02□□□□□ -0.33
HLA-E-203ENST00000493699 Q8NDZ9 215 aa13.01□□□□□ -0.33
HLA-E-203ENST00000493699 IFI27L1Q96BM0 104 aa13.01□□□□□ -0.33
HLA-E-203ENST00000493699 TMEM223A0PJW6 202 aa13□□□□□ -0.33
HLA-E-203ENST00000493699 RPL24P83731 157 aaKnown RBP12.99□□□□□ -0.33
HLA-E-203ENST00000493699 CRYGAP11844 174 aa12.98□□□□□ -0.33
HLA-E-203ENST00000493699 UBE2AP49459 152 aa12.98□□□□□ -0.33
HLA-E-203ENST00000493699 CBLN2Q8IUK8 224 aa12.97□□□□□ -0.33
HLA-E-203ENST00000493699 ANAPC11Q9NYG5 84 aa12.97□□□□□ -0.33
HLA-E-203ENST00000493699 TMEM126AQ9H061 195 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms