RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 TIMM17AQ99595 171 aa13.35□□□□□ -0.27
LYSMD4-208ENST00000493256 SEC11AP67812 179 aa13.34□□□□□ -0.27
LYSMD4-208ENST00000493256 ADCYAP1P18509 176 aa13.33□□□□□ -0.28
LYSMD4-208ENST00000493256 G0S2P27469 103 aa13.33□□□□□ -0.28
LYSMD4-208ENST00000493256 CLLU1Q5K131 121 aa13.33□□□□□ -0.28
LYSMD4-208ENST00000493256 GEMIN7Q9H840 131 aaKnown RBP13.33□□□□□ -0.28
LYSMD4-208ENST00000493256 IGLV1-50A0A075B6I6 118 aa13.32□□□□□ -0.28
LYSMD4-208ENST00000493256 XAGE1AQ9HD64 81 aa13.32□□□□□ -0.28
LYSMD4-208ENST00000493256 LPAP08519 4548 aa13.31□□□□□ -0.28
LYSMD4-208ENST00000493256 F8VRH5 84 aa13.31□□□□□ -0.28
LYSMD4-208ENST00000493256 C22orf24Q9Y442 160 aa13.31□□□□□ -0.28
LYSMD4-208ENST00000493256 ERASQ7Z444 233 aa13.3□□□□□ -0.28
LYSMD4-208ENST00000493256 SCGB3A1Q96QR1 104 aa13.29□□□□□ -0.28
LYSMD4-208ENST00000493256 TRAV9-1A0A075B6T8 112 aa13.27□□□□□ -0.29
LYSMD4-208ENST00000493256 TMEM218A2RU14 115 aa13.27□□□□□ -0.29
LYSMD4-208ENST00000493256 SMIM1B2RUZ4 78 aa13.27□□□□□ -0.29
LYSMD4-208ENST00000493256 ZNF861PO60384 105 aa13.26□□□□□ -0.29
LYSMD4-208ENST00000493256 CXCL5P42830 114 aa13.26□□□□□ -0.29
LYSMD4-208ENST00000493256 LBHQ53QV2 105 aaPredicted RBP13.26□□□□□ -0.29
LYSMD4-208ENST00000493256 UQCC3Q6UW78 93 aa13.26□□□□□ -0.29
LYSMD4-208ENST00000493256 TINCRA0A1B0GVN0 87 aa13.25□□□□□ -0.29
LYSMD4-208ENST00000493256 LINC01546A6NGU7 62 aa13.24□□□□□ -0.29
LYSMD4-208ENST00000493256 NUPR1O60356 82 aa13.24□□□□□ -0.29
LYSMD4-208ENST00000493256 IGLV5-45A0A087WSX0 123 aa13.23□□□□□ -0.29
LYSMD4-208ENST00000493256 RPL13AP40429 203 aaKnown RBP13.23□□□□□ -0.29
LYSMD4-208ENST00000493256 PDZD11Q5EBL8 140 aa13.23□□□□□ -0.29
LYSMD4-208ENST00000493256 MRPL55Q7Z7F7 128 aaKnown RBP13.23□□□□□ -0.29
LYSMD4-208ENST00000493256 COX7B2Q8TF08 81 aa13.23□□□□□ -0.29
LYSMD4-208ENST00000493256 GNB1LQ9BYB4 327 aa13.23□□□□□ -0.29
LYSMD4-208ENST00000493256 TP73-AS1Q9UF72 201 aa13.23□□□□□ -0.29
LYSMD4-208ENST00000493256 CST9LQ9H4G1 147 aa13.22□□□□□ -0.29
LYSMD4-208ENST00000493256 S100PP25815 95 aa13.21□□□□□ -0.29
LYSMD4-208ENST00000493256 CARHSP1Q9Y2V2 147 aaKnown RBP13.21□□□□□ -0.29
LYSMD4-208ENST00000493256 LINC01549A6NIU2 74 aa13.2□□□□□ -0.3
LYSMD4-208ENST00000493256 IFITM2Q01629 132 aa13.2□□□□□ -0.3
LYSMD4-208ENST00000493256 SPINK8P0C7L1 97 aa13.19□□□□□ -0.3
LYSMD4-208ENST00000493256 SEC11CQ9BY50 192 aa13.19□□□□□ -0.3
LYSMD4-208ENST00000493256 BCE1O60756 84 aa13.17□□□□□ -0.3
LYSMD4-208ENST00000493256 PMVKQ15126 192 aa13.17□□□□□ -0.3
LYSMD4-208ENST00000493256 FA2HQ7L5A8 372 aa13.17□□□□□ -0.3
LYSMD4-208ENST00000493256 LINC00167Q96N53 147 aa13.17□□□□□ -0.3
LYSMD4-208ENST00000493256 MRPL18Q9H0U6 180 aaKnown RBP13.16□□□□□ -0.3
LYSMD4-208ENST00000493256 RPL37AP8A6NKH3 93 aa13.15□□□□□ -0.3
LYSMD4-208ENST00000493256 RPL28P46779 137 aaKnown RBP13.15□□□□□ -0.3
LYSMD4-208ENST00000493256 RAB5BP61020 215 aa13.15□□□□□ -0.3
LYSMD4-208ENST00000493256 COX19Q49B96 90 aa13.15□□□□□ -0.3
LYSMD4-208ENST00000493256 GAGE10A6NGK3 116 aa13.14□□□□□ -0.31
LYSMD4-208ENST00000493256 FABP9Q0Z7S8 132 aa13.14□□□□□ -0.31
LYSMD4-208ENST00000493256 SMCO4Q9NRQ5 59 aa13.14□□□□□ -0.31
LYSMD4-208ENST00000493256 IGLV5-37A0A075B6J1 123 aa13.12□□□□□ -0.31
LYSMD4-208ENST00000493256 PRR4Q16378 134 aa13.12□□□□□ -0.31
LYSMD4-208ENST00000493256 A0A087X002 238 aa13.11□□□□□ -0.31
LYSMD4-208ENST00000493256 H3BRM9 83 aa13.11□□□□□ -0.31
LYSMD4-208ENST00000493256 COMMD7Q86VX2 200 aa13.11□□□□□ -0.31
LYSMD4-208ENST00000493256 A0A096LNJ9 63 aa13.09□□□□□ -0.31
LYSMD4-208ENST00000493256 ATP5LO75964 103 aa13.09□□□□□ -0.31
LYSMD4-208ENST00000493256 IGLC3P0DOY3 106 aa13.09□□□□□ -0.31
LYSMD4-208ENST00000493256 NKAPP1Q8N9T2 125 aa13.09□□□□□ -0.31
LYSMD4-208ENST00000493256 IGLV5-39A0A0G2JS06 123 aa13.08□□□□□ -0.32
LYSMD4-208ENST00000493256 RHEBQ15382 184 aa13.08□□□□□ -0.32
LYSMD4-208ENST00000493256 C10orf91Q5T1B1 145 aa13.08□□□□□ -0.32
LYSMD4-208ENST00000493256 RPS10P5Q9NQ39 176 aa13.08□□□□□ -0.32
LYSMD4-208ENST00000493256 KRTAP13-1Q8IUC0 172 aa13.07□□□□□ -0.32
LYSMD4-208ENST00000493256 SCO1O75880 301 aa13.06□□□□□ -0.32
LYSMD4-208ENST00000493256 TSPAN13O95857 204 aa13.06□□□□□ -0.32
LYSMD4-208ENST00000493256 CRYGAP11844 174 aa13.06□□□□□ -0.32
LYSMD4-208ENST00000493256 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
LYSMD4-208ENST00000493256 NDUFA6P56556 154 aa13.06□□□□□ -0.32
LYSMD4-208ENST00000493256 URB1-AS1Q96HZ7 61 aa13.06□□□□□ -0.32
LYSMD4-208ENST00000493256 PFN2P35080 140 aa13.05□□□□□ -0.32
LYSMD4-208ENST00000493256 ANAPC11Q9NYG5 84 aa13.05□□□□□ -0.32
LYSMD4-208ENST00000493256 UBE2AP49459 152 aa13.04□□□□□ -0.32
LYSMD4-208ENST00000493256 TYMSOSQ8TAI1 123 aa13.04□□□□□ -0.32
LYSMD4-208ENST00000493256 C18orf32Q8TCD1 76 aa13.04□□□□□ -0.32
LYSMD4-208ENST00000493256 IGKV2-28A0A075B6P5 120 aa13.03□□□□□ -0.32
LYSMD4-208ENST00000493256 IGKV2D-28P01615 120 aa13.03□□□□□ -0.32
LYSMD4-208ENST00000493256 LINC00614P0C842 121 aa13.02□□□□□ -0.33
LYSMD4-208ENST00000493256 PMCHL1Q16048 86 aa13.02□□□□□ -0.33
LYSMD4-208ENST00000493256 ERG28Q9UKR5 140 aa13.02□□□□□ -0.33
LYSMD4-208ENST00000493256 HBDP02042 147 aa13.01□□□□□ -0.33
LYSMD4-208ENST00000493256 SND1-IT1Q9HBX3 110 aa13.01□□□□□ -0.33
LYSMD4-208ENST00000493256 TRAPPC1Q9Y5R8 145 aa13.01□□□□□ -0.33
LYSMD4-208ENST00000493256 VPREB1P12018 145 aa13□□□□□ -0.33
LYSMD4-208ENST00000493256 KRTAP13-2Q52LG2 175 aa13□□□□□ -0.33
LYSMD4-208ENST00000493256 MUC2Q02817 5179 aa13□□□□□ -0.33
LYSMD4-208ENST00000493256 C11orf86A6NJI1 115 aa12.98□□□□□ -0.33
LYSMD4-208ENST00000493256 ZNF625Q96I27 306 aaPredicted RBP12.98□□□□□ -0.33
LYSMD4-208ENST00000493256 COX17Q14061 63 aa12.97□□□□□ -0.33
LYSMD4-208ENST00000493256 PRLHP81277 87 aa12.96□□□□□ -0.33
LYSMD4-208ENST00000493256 BAGE3Q86Y29 109 aa12.96□□□□□ -0.33
LYSMD4-208ENST00000493256 Q8NDZ9 215 aa12.96□□□□□ -0.33
LYSMD4-208ENST00000493256 TMEM238C9JI98 176 aa12.95□□□□□ -0.34
LYSMD4-208ENST00000493256 FAM229BQ4G0N7 80 aa12.95□□□□□ -0.34
LYSMD4-208ENST00000493256 TMEM170BQ5T4T1 132 aa12.95□□□□□ -0.34
LYSMD4-208ENST00000493256 TMEM126AQ9H061 195 aa12.95□□□□□ -0.34
LYSMD4-208ENST00000493256 RPL24P83731 157 aaKnown RBP12.94□□□□□ -0.34
LYSMD4-208ENST00000493256 FAM19A1Q7Z5A9 133 aa12.93□□□□□ -0.34
LYSMD4-208ENST00000493256 M0R378 163 aa12.92□□□□□ -0.34
LYSMD4-208ENST00000493256 SFTA2Q6UW10 78 aa12.92□□□□□ -0.34
LYSMD4-208ENST00000493256 APOC3P02656 99 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms